RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 Q8N3U1 123 aa7.58□□□□□ -1.2
SCFD1-206ENST00000484733 RMI2Q96E14 147 aa7.58□□□□□ -1.2
SCFD1-206ENST00000484733 Q9UF83 564 aa7.58□□□□□ -1.2
SCFD1-206ENST00000484733 DAZ4Q86SG3 579 aaKnown RBP7.57□□□□□ -1.2
SCFD1-206ENST00000484733 CHCHD7Q9BUK0 85 aa7.57□□□□□ -1.2
SCFD1-206ENST00000484733 DAZ3Q9NR90 486 aaKnown RBP7.57□□□□□ -1.2
SCFD1-206ENST00000484733 HAMPP81172 84 aa7.57□□□□□ -1.2
SCFD1-206ENST00000484733 NIT1Q86X76 327 aa7.57□□□□□ -1.2
SCFD1-206ENST00000484733 CYTL1Q9NRR1 136 aa7.57□□□□□ -1.2
SCFD1-206ENST00000484733 HERC1Q15751 4861 aa7.57□□□□□ -1.2
SCFD1-206ENST00000484733 TRBV10-1A0A0K0K1A3 114 aa7.56□□□□□ -1.2
SCFD1-206ENST00000484733 G3V3Q6 166 aa7.56□□□□□ -1.2
SCFD1-206ENST00000484733 LTAP01374 205 aa7.56□□□□□ -1.2
SCFD1-206ENST00000484733 MAP1LC3B2A6NCE7 125 aa7.56□□□□□ -1.2
SCFD1-206ENST00000484733 TPT1P13693 172 aaKnown RBP7.56□□□□□ -1.2
SCFD1-206ENST00000484733 UBE2G1P62253 170 aa7.56□□□□□ -1.2
SCFD1-206ENST00000484733 MAP1LC3BQ9GZQ8 125 aa7.56□□□□□ -1.2
SCFD1-206ENST00000484733 PHLDA3Q9Y5J5 127 aa7.56□□□□□ -1.2
SCFD1-206ENST00000484733 GRIFINA4D1Z8 144 aa7.55□□□□□ -1.2
SCFD1-206ENST00000484733 M0R036 132 aa7.55□□□□□ -1.2
SCFD1-206ENST00000484733 ELOBQ15370 118 aa7.55□□□□□ -1.2
SCFD1-206ENST00000484733 ZFP82Q8N141 532 aa7.55□□□□□ -1.2
SCFD1-206ENST00000484733 Q8N976 141 aa7.55□□□□□ -1.2
SCFD1-206ENST00000484733 STOML3Q8TAV4 291 aa7.55□□□□□ -1.2
SCFD1-206ENST00000484733 CXCL1P09341 107 aa7.55□□□□□ -1.2
SCFD1-206ENST00000484733 OR10G8Q8NGN5 311 aa7.55□□□□□ -1.2
SCFD1-206ENST00000484733 URGCP-MRPS24S4R325 110 aa7.55□□□□□ -1.2
SCFD1-206ENST00000484733 PLA2G1BP04054 148 aaKnown RBP7.54□□□□□ -1.2
SCFD1-206ENST00000484733 S100A9P06702 114 aaKnown RBP7.54□□□□□ -1.2
SCFD1-206ENST00000484733 ATRAIDQ6UW56 229 aa7.54□□□□□ -1.2
SCFD1-206ENST00000484733 UBE2D3P61077 147 aa7.53□□□□□ -1.2
SCFD1-206ENST00000484733 UBE2D2P62837 147 aa7.53□□□□□ -1.2
SCFD1-206ENST00000484733 RPL36AP83881 106 aaKnown RBP7.53□□□□□ -1.2
SCFD1-206ENST00000484733 BAALCQ8WXS3 180 aa7.53□□□□□ -1.2
SCFD1-206ENST00000484733 RPL36ALQ969Q0 106 aaKnown RBP7.53□□□□□ -1.2
SCFD1-206ENST00000484733 MYCBP2O75592 4640 aa7.53□□□□□ -1.2
SCFD1-206ENST00000484733 A0A087WWL8 130 aa7.53□□□□□ -1.2
SCFD1-206ENST00000484733 AKR1C3P42330 323 aa7.53□□□□□ -1.2
SCFD1-206ENST00000484733 FAM74A4Q5TZK3 123 aa7.53□□□□□ -1.2
SCFD1-206ENST00000484733 MBD3L1Q8WWY6 194 aa7.53□□□□□ -1.2
SCFD1-206ENST00000484733 TRBV7-3A0A075B6L6 115 aa7.52□□□□□ -1.2
SCFD1-206ENST00000484733 M0R381 172 aa7.52□□□□□ -1.2
SCFD1-206ENST00000484733 LECT2O14960 151 aa7.52□□□□□ -1.2
SCFD1-206ENST00000484733 RAB4BP61018 213 aa7.52□□□□□ -1.2
SCFD1-206ENST00000484733 Q0VG73 95 aa7.52□□□□□ -1.2
SCFD1-206ENST00000484733 CST9LP1Q5W188 147 aa7.52□□□□□ -1.2
SCFD1-206ENST00000484733 PRR27Q6MZM9 219 aa7.52□□□□□ -1.21
SCFD1-206ENST00000484733 KLK12Q9UKR0 248 aa7.52□□□□□ -1.21
SCFD1-206ENST00000484733 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-206ENST00000484733 IGKV2D-24A0A075B6R9 120 aa7.51□□□□□ -1.21
SCFD1-206ENST00000484733 TMSB15BA0A087X1C1 80 aa7.51□□□□□ -1.21
SCFD1-206ENST00000484733 ARPC5O15511 151 aa7.51□□□□□ -1.21
SCFD1-206ENST00000484733 KCNIP4Q6PIL6 250 aa7.51□□□□□ -1.21
SCFD1-206ENST00000484733 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
SCFD1-206ENST00000484733 MLST8Q9BVC4 326 aa7.51□□□□□ -1.21
SCFD1-206ENST00000484733 A0A087WX48 190 aa7.51□□□□□ -1.21
SCFD1-206ENST00000484733 PAGE4O60829 102 aa7.51□□□□□ -1.21
SCFD1-206ENST00000484733 KCNRGQ8N5I3 272 aa7.51□□□□□ -1.21
SCFD1-206ENST00000484733 SSBP4Q9BWG4 385 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-206ENST00000484733 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-206ENST00000484733 RBFOX3A6NFN3 312 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-206ENST00000484733 UMAD1C9J7I0 102 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 SNAI2O43623 268 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 ZNF345Q14585 488 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 UBE2WQ96B02 151 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 SRRM2Q9UQ35 2752 aaKnown RBP7.5□□□□□ -1.21
SCFD1-206ENST00000484733 TRBV6-8A0A0A6YYG3 113 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 PKIAP61925 76 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 C14orf177Q52M58 125 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 NEXN-AS1Q8NBZ9 246 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
SCFD1-206ENST00000484733 OR5AL1P0C617 328 aa7.49□□□□□ -1.21
SCFD1-206ENST00000484733 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
SCFD1-206ENST00000484733 ZNF471Q9BX82 626 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-206ENST00000484733 J3QL48 77 aa7.49□□□□□ -1.21
SCFD1-206ENST00000484733 RGS21Q2M5E4 152 aa7.49□□□□□ -1.21
SCFD1-206ENST00000484733 TMEM97Q5BJF2 176 aa7.49□□□□□ -1.21
SCFD1-206ENST00000484733 SCXQ7RTU7 201 aa7.49□□□□□ -1.21
SCFD1-206ENST00000484733 BAGE2Q86Y30 109 aa7.49□□□□□ -1.21
SCFD1-206ENST00000484733 HMSDA8MTL9 139 aa7.48□□□□□ -1.21
SCFD1-206ENST00000484733 PFDN1O60925 122 aa7.48□□□□□ -1.21
SCFD1-206ENST00000484733 ENHOQ6UWT2 76 aa7.48□□□□□ -1.21
SCFD1-206ENST00000484733 OR10AG1Q8NH19 301 aa7.48□□□□□ -1.21
SCFD1-206ENST00000484733 SFT2D1Q8WV19 159 aa7.48□□□□□ -1.21
SCFD1-206ENST00000484733 CHAC1Q9BUX1 264 aa7.48□□□□□ -1.21
SCFD1-206ENST00000484733 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
SCFD1-206ENST00000484733 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-206ENST00000484733 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
SCFD1-206ENST00000484733 VAX2Q9UIW0 290 aa7.47□□□□□ -1.21
SCFD1-206ENST00000484733 FLG2Q5D862 2391 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-206ENST00000484733 A0A0D9SG52 128 aa7.47□□□□□ -1.21
SCFD1-206ENST00000484733 TMEM262E9PQX1 116 aa7.47□□□□□ -1.21
SCFD1-206ENST00000484733 RPL19P84098 196 aaKnown RBP7.47□□□□□ -1.21
SCFD1-206ENST00000484733 ZNF56Q15929 161 aa7.47□□□□□ -1.21
SCFD1-206ENST00000484733 FAM213BQ8TBF2 198 aa7.47□□□□□ -1.21
SCFD1-206ENST00000484733 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.21
SCFD1-206ENST00000484733 LINC01620Q4KN68 170 aa7.46□□□□□ -1.21
SCFD1-206ENST00000484733 KIF25-AS1Q9Y6Z4 181 aa7.46□□□□□ -1.21
SCFD1-206ENST00000484733 SMLR1H3BR10 107 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms