RNA–Protein interactions for RNA: ENST00000481110.6

FGFR3-208, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best) BASIC

Gene FGFR3, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-208ENST00000481110 PCSK5Q92824 1860 aa12.72□□□□□ -0.37
FGFR3-208ENST00000481110 TRBV25-1A0A075B6N4 114 aa12.72□□□□□ -0.37
FGFR3-208ENST00000481110 TNFRSF13BO14836 293 aaPredicted RBP12.72□□□□□ -0.37
FGFR3-208ENST00000481110 CHCHD5Q9BSY4 110 aa12.72□□□□□ -0.37
FGFR3-208ENST00000481110 MLST8Q9BVC4 326 aa12.72□□□□□ -0.37
FGFR3-208ENST00000481110 INSP01308 110 aa12.71□□□□□ -0.37
FGFR3-208ENST00000481110 DEFB130BP0DP73 79 aa12.71□□□□□ -0.37
FGFR3-208ENST00000481110 DEFB130AP0DP74 79 aa12.71□□□□□ -0.37
FGFR3-208ENST00000481110 APRG1Q8IVJ8 170 aa12.71□□□□□ -0.38
FGFR3-208ENST00000481110 MBD6Q96DN6 1003 aa12.71□□□□□ -0.38
FGFR3-208ENST00000481110 RPL39LQ96EH5 51 aaKnown RBP12.71□□□□□ -0.38
FGFR3-208ENST00000481110 SPXQ9BT56 116 aa12.71□□□□□ -0.38
FGFR3-208ENST00000481110 PLNP26678 52 aa12.7□□□□□ -0.38
FGFR3-208ENST00000481110 BOD1L1Q8NFC6 3051 aa12.7□□□□□ -0.38
FGFR3-208ENST00000481110 C11orf68Q9H3H3 251 aaKnown RBP12.7□□□□□ -0.38
FGFR3-208ENST00000481110 H3BUA1 57 aa12.69□□□□□ -0.38
FGFR3-208ENST00000481110 IGHV4OR15-8A0A075B7B6 117 aa12.69□□□□□ -0.38
FGFR3-208ENST00000481110 A0A087WW49 117 aa12.69□□□□□ -0.38
FGFR3-208ENST00000481110 A0A1B0GXF2 115 aa12.69□□□□□ -0.38
FGFR3-208ENST00000481110 C10orf99Q6UWK7 81 aa12.69□□□□□ -0.38
FGFR3-208ENST00000481110 OR13C6PQ8NH95 151 aa12.69□□□□□ -0.38
FGFR3-208ENST00000481110 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
FGFR3-208ENST00000481110 CEND1Q8N111 149 aa12.69□□□□□ -0.38
FGFR3-208ENST00000481110 VWC2LB2RUY7 222 aa12.68□□□□□ -0.38
FGFR3-208ENST00000481110 IGF1P05019 195 aa12.68□□□□□ -0.38
FGFR3-208ENST00000481110 LGALS1P09382 135 aaKnown RBP12.68□□□□□ -0.38
FGFR3-208ENST00000481110 ATP6V0BQ99437 205 aa12.68□□□□□ -0.38
FGFR3-208ENST00000481110 TET2Q6N021 2002 aaPredicted RBP12.68□□□□□ -0.38
FGFR3-208ENST00000481110 REV3LO60673 3130 aa12.68□□□□□ -0.38
FGFR3-208ENST00000481110 C9JAW5 83 aa12.68□□□□□ -0.38
FGFR3-208ENST00000481110 C12orf74Q32Q52 190 aa12.68□□□□□ -0.38
FGFR3-208ENST00000481110 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
FGFR3-208ENST00000481110 RPL36AP83881 106 aaKnown RBP12.67□□□□□ -0.38
FGFR3-208ENST00000481110 GAGE2BQ13066 116 aa12.67□□□□□ -0.38
FGFR3-208ENST00000481110 GAGE2EQ4V326 116 aa12.67□□□□□ -0.38
FGFR3-208ENST00000481110 RNASE13Q5GAN3 156 aaKnown RBP12.67□□□□□ -0.38
FGFR3-208ENST00000481110 RPL36ALQ969Q0 106 aaKnown RBP12.67□□□□□ -0.38
FGFR3-208ENST00000481110 GAGE2DQ9UEU5 116 aa12.67□□□□□ -0.38
FGFR3-208ENST00000481110 RBAKDNA6NC62 111 aa12.67□□□□□ -0.38
FGFR3-208ENST00000481110 TSPAN13O95857 204 aa12.67□□□□□ -0.38
FGFR3-208ENST00000481110 HLA-DRB4P13762 266 aa12.67□□□□□ -0.38
FGFR3-208ENST00000481110 HLA-DRB4X5D2U9 266 aa12.67□□□□□ -0.38
FGFR3-208ENST00000481110 A6NDX4 124 aa12.67□□□□□ -0.38
FGFR3-208ENST00000481110 PRADC1Q9BSG0 188 aa12.66□□□□□ -0.38
FGFR3-208ENST00000481110 FRYQ5TBA9 3013 aa12.66□□□□□ -0.38
FGFR3-208ENST00000481110 CRIP1P50238 77 aa12.66□□□□□ -0.38
FGFR3-208ENST00000481110 LINC01559Q495D7 138 aa12.66□□□□□ -0.38
FGFR3-208ENST00000481110 ZFAND6Q6FIF0 208 aa12.66□□□□□ -0.38
FGFR3-208ENST00000481110 F8W1H4 67 aa12.66□□□□□ -0.38
FGFR3-208ENST00000481110 Q6ZS46 218 aa12.66□□□□□ -0.38
FGFR3-208ENST00000481110 FSTL3O95633 263 aa12.65□□□□□ -0.38
FGFR3-208ENST00000481110 TRPT1Q86TN4 253 aaKnown RBP12.65□□□□□ -0.38
FGFR3-208ENST00000481110 BOD1L2Q8IYS8 172 aa12.65□□□□□ -0.38
FGFR3-208ENST00000481110 GAGE12JA6NER3 117 aa12.65□□□□□ -0.38
FGFR3-208ENST00000481110 GAGE4Q13068 117 aa12.65□□□□□ -0.38
FGFR3-208ENST00000481110 GAGE5Q13069 117 aa12.65□□□□□ -0.38
FGFR3-208ENST00000481110 EBI3Q14213 229 aa12.65□□□□□ -0.38
FGFR3-208ENST00000481110 MRPL53Q96EL3 112 aaKnown RBP12.65□□□□□ -0.38
FGFR3-208ENST00000481110 JPT2Q9H910 190 aa12.65□□□□□ -0.38
FGFR3-208ENST00000481110 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
FGFR3-208ENST00000481110 G3V4G9 280 aa12.64□□□□□ -0.39
FGFR3-208ENST00000481110 ZNF48Q96MX3 618 aaPredicted RBP12.64□□□□□ -0.39
FGFR3-208ENST00000481110 ADARB2-AS1A8MUL3 147 aa12.64□□□□□ -0.39
FGFR3-208ENST00000481110 LENEPQ9Y5L5 61 aa12.64□□□□□ -0.39
FGFR3-208ENST00000481110 MYCNOSP40205 109 aa12.64□□□□□ -0.39
FGFR3-208ENST00000481110 ATRQ13535 2644 aa12.63□□□□□ -0.39
FGFR3-208ENST00000481110 GAGE7O76087 117 aa12.63□□□□□ -0.39
FGFR3-208ENST00000481110 GAGE12FP0CL80 117 aa12.63□□□□□ -0.39
FGFR3-208ENST00000481110 GAGE12GP0CL81 117 aa12.63□□□□□ -0.39
FGFR3-208ENST00000481110 GAGE12IP0CL82 117 aa12.63□□□□□ -0.39
FGFR3-208ENST00000481110 IGLL5B9A064 214 aa12.63□□□□□ -0.39
FGFR3-208ENST00000481110 SMAD5-AS1Q9Y6J3 95 aa12.63□□□□□ -0.39
FGFR3-208ENST00000481110 ZNRF2Q8NHG8 242 aa12.63□□□□□ -0.39
FGFR3-208ENST00000481110 F8VRH5 84 aa12.62□□□□□ -0.39
FGFR3-208ENST00000481110 C9orf47Q6ZRZ4 202 aa12.62□□□□□ -0.39
FGFR3-208ENST00000481110 MYMXA0A1B0GTQ4 84 aa12.62□□□□□ -0.39
FGFR3-208ENST00000481110 CCL24O00175 119 aa12.61□□□□□ -0.39
FGFR3-208ENST00000481110 SIVA1O15304 175 aa12.61□□□□□ -0.39
FGFR3-208ENST00000481110 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
FGFR3-208ENST00000481110 PRSS29PA6NIE9 313 aa12.61□□□□□ -0.39
FGFR3-208ENST00000481110 PMVKQ15126 192 aa12.6□□□□□ -0.39
FGFR3-208ENST00000481110 Q8N1Y9 231 aa12.6□□□□□ -0.39
FGFR3-208ENST00000481110 C10orf126Q8N4M7 172 aa12.6□□□□□ -0.39
FGFR3-208ENST00000481110 A0A096LPF7 62 aa12.6□□□□□ -0.39
FGFR3-208ENST00000481110 IGLV2-11P01706 119 aa12.6□□□□□ -0.39
FGFR3-208ENST00000481110 FOXI2Q6ZQN5 318 aa12.6□□□□□ -0.39
FGFR3-208ENST00000481110 Q8N6K4 173 aa12.6□□□□□ -0.39
FGFR3-208ENST00000481110 PTH2Q96A98 100 aa12.6□□□□□ -0.39
FGFR3-208ENST00000481110 URB1-AS1Q96HZ7 61 aa12.6□□□□□ -0.39
FGFR3-208ENST00000481110 AVPP01185 164 aa12.59□□□□□ -0.39
FGFR3-208ENST00000481110 TMEM61Q8N0U2 210 aa12.59□□□□□ -0.39
FGFR3-208ENST00000481110 RAI1Q7Z5J4 1906 aaPredicted RBP12.59□□□□□ -0.39
FGFR3-208ENST00000481110 WFDC11Q8NEX6 87 aa12.59□□□□□ -0.39
FGFR3-208ENST00000481110 IGKV2D-26A0A0A0MRZ7 120 aa12.59□□□□□ -0.39
FGFR3-208ENST00000481110 I3L3M4 83 aa12.59□□□□□ -0.39
FGFR3-208ENST00000481110 MDFICQ9P1T7 246 aa12.59□□□□□ -0.39
FGFR3-208ENST00000481110 TRAV8-4A0A0B4J246 113 aa12.58□□□□□ -0.4
FGFR3-208ENST00000481110 C2orf91Q6ZV80 131 aa12.58□□□□□ -0.4
FGFR3-208ENST00000481110 GPHB5Q86YW7 130 aa12.58□□□□□ -0.4
FGFR3-208ENST00000481110 AKAP13Q12802 2813 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms