RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 WDR83OSQ9Y284 106 aa6.9□□□□□ -1.3
USP11-208ENST00000480104 S100A4P26447 101 aaKnown RBP6.89□□□□□ -1.31
USP11-208ENST00000480104 SSBP1Q04837 148 aaKnown RBP6.89□□□□□ -1.31
USP11-208ENST00000480104 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
USP11-208ENST00000480104 C9orf116Q5BN46 136 aaPredicted RBP6.89□□□□□ -1.31
USP11-208ENST00000480104 KRTAP11-1Q8IUC1 163 aa6.89□□□□□ -1.31
USP11-208ENST00000480104 NEXN-AS1Q8NBZ9 246 aa6.89□□□□□ -1.31
USP11-208ENST00000480104 CARD19Q96LW7 228 aa6.89□□□□□ -1.31
USP11-208ENST00000480104 NMES1Q9C002 83 aa6.89□□□□□ -1.31
USP11-208ENST00000480104 PHLDA3Q9Y5J5 127 aa6.89□□□□□ -1.31
USP11-208ENST00000480104 IGLV4-60A0A075B6I1 120 aa6.88□□□□□ -1.31
USP11-208ENST00000480104 A0A087WZ39 114 aa6.88□□□□□ -1.31
USP11-208ENST00000480104 EIF3GO75821 320 aaKnown RBP eCLIP6.88□□□□□ -1.31
USP11-208ENST00000480104 MBPP02686 304 aaPredicted RBP6.88□□□□□ -1.31
USP11-208ENST00000480104 LINC00526Q96FQ7 95 aa6.88□□□□□ -1.31
USP11-208ENST00000480104 SCP2D1Q9UJQ7 156 aa6.88□□□□□ -1.31
USP11-208ENST00000480104 UBE2L5PA0A1B0GUS4 154 aa6.87□□□□□ -1.31
USP11-208ENST00000480104 GCGP01275 180 aa6.87□□□□□ -1.31
USP11-208ENST00000480104 ZNF674Q2M3X9 581 aa6.87□□□□□ -1.31
USP11-208ENST00000480104 TMEM128Q5BJH2 165 aa6.87□□□□□ -1.31
USP11-208ENST00000480104 MITD1Q8WV92 249 aa6.87□□□□□ -1.31
USP11-208ENST00000480104 PPDPFQ9H3Y8 114 aa6.87□□□□□ -1.31
USP11-208ENST00000480104 UQCC1Q9NVA1 299 aa6.87□□□□□ -1.31
USP11-208ENST00000480104 NEBP20929 6669 aa6.87□□□□□ -1.31
USP11-208ENST00000480104 TRBV25-1A0A075B6N4 114 aa6.86□□□□□ -1.31
USP11-208ENST00000480104 A0A087X002 238 aa6.86□□□□□ -1.31
USP11-208ENST00000480104 SCGB1D2O95969 90 aa6.86□□□□□ -1.31
USP11-208ENST00000480104 TAS2R30P59541 319 aa6.86□□□□□ -1.31
USP11-208ENST00000480104 BAXQ07812 192 aa6.86□□□□□ -1.31
USP11-208ENST00000480104 LINC00173Q6ZV60 143 aa6.86□□□□□ -1.31
USP11-208ENST00000480104 DERL1Q9BUN8 251 aa6.86□□□□□ -1.31
USP11-208ENST00000480104 MCUBQ9NWR8 336 aa6.86□□□□□ -1.31
USP11-208ENST00000480104 OR5AC2Q9NZP5 309 aa6.86□□□□□ -1.31
USP11-208ENST00000480104 TRAV6A0A075B6T7 132 aa6.85□□□□□ -1.31
USP11-208ENST00000480104 H3BVH4 76 aa6.85□□□□□ -1.31
USP11-208ENST00000480104 OR7C2O60412 319 aa6.85□□□□□ -1.31
USP11-208ENST00000480104 SULT1A2P50226 295 aa6.85□□□□□ -1.31
USP11-208ENST00000480104 UBE2L3P68036 154 aaKnown RBP6.85□□□□□ -1.31
USP11-208ENST00000480104 NEDD8Q15843 81 aa6.85□□□□□ -1.31
USP11-208ENST00000480104 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.85□□□□□ -1.31
USP11-208ENST00000480104 C15orf40Q8WUR7 153 aa6.85□□□□□ -1.31
USP11-208ENST00000480104 SMIM4Q8WVI0 70 aa6.85□□□□□ -1.31
USP11-208ENST00000480104 SFRP2Q96HF1 295 aa6.85□□□□□ -1.31
USP11-208ENST00000480104 SGK494Q96LW2 274 aa6.85□□□□□ -1.31
USP11-208ENST00000480104 NAA50Q9GZZ1 169 aaKnown RBP6.85□□□□□ -1.31
USP11-208ENST00000480104 IGKV3D-20A0A0C4DH25 116 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 SFT2D2O95562 160 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 PPP1R1AQ13522 171 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 IQCJQ1A5X6 159 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 TMEM97Q5BJF2 176 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 OR11H4Q8NGC9 324 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 TYMSOSQ8TAI1 123 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 CMTM2Q8TAZ6 248 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 NDFIP1Q9BT67 221 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 SSBP4Q9BWG4 385 aaPredicted RBP6.84□□□□□ -1.31
USP11-208ENST00000480104 IL36BQ9NZH7 164 aa6.84□□□□□ -1.31
USP11-208ENST00000480104 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
USP11-208ENST00000480104 TRBV6-1A0A0K0K1D8 114 aa6.83□□□□□ -1.32
USP11-208ENST00000480104 LOC107984640A0A0U1RRK4 108 aa6.83□□□□□ -1.32
USP11-208ENST00000480104 C7orf66A4D0T2 115 aa6.83□□□□□ -1.32
USP11-208ENST00000480104 CST7O76096 145 aa6.83□□□□□ -1.32
USP11-208ENST00000480104 FGF7P21781 194 aa6.83□□□□□ -1.32
USP11-208ENST00000480104 SEC61BP60468 96 aaKnown RBP6.83□□□□□ -1.32
USP11-208ENST00000480104 SPANXN2Q5MJ10 180 aa6.83□□□□□ -1.32
USP11-208ENST00000480104 OTORQ9NRC9 128 aa6.83□□□□□ -1.32
USP11-208ENST00000480104 LYRM2Q9NU23 88 aaPredicted RBP6.83□□□□□ -1.32
USP11-208ENST00000480104 IGHV1-24A0A0C4DH33 117 aa6.82□□□□□ -1.32
USP11-208ENST00000480104 IGKV3OR2-268A0A0C4DH90 116 aa6.82□□□□□ -1.32
USP11-208ENST00000480104 ANKRD20A5PA0PJZ0 165 aa6.82□□□□□ -1.32
USP11-208ENST00000480104 BCL2P10415 239 aa6.82□□□□□ -1.32
USP11-208ENST00000480104 GNG5P63218 68 aa6.82□□□□□ -1.32
USP11-208ENST00000480104 MRPS10P82664 201 aaKnown RBP6.82□□□□□ -1.32
USP11-208ENST00000480104 AQP10Q96PS8 301 aa6.82□□□□□ -1.32
USP11-208ENST00000480104 A0A1B0GUV1 79 aa6.81□□□□□ -1.32
USP11-208ENST00000480104 M0R381 172 aa6.81□□□□□ -1.32
USP11-208ENST00000480104 SYCNQ0VAF6 134 aa6.81□□□□□ -1.32
USP11-208ENST00000480104 CTF1Q16619 201 aa6.81□□□□□ -1.32
USP11-208ENST00000480104 MZT2AQ6P582 158 aa6.81□□□□□ -1.32
USP11-208ENST00000480104 LINC00337Q8N6G1 96 aa6.81□□□□□ -1.32
USP11-208ENST00000480104 NCS1P62166 190 aa6.8□□□□□ -1.32
USP11-208ENST00000480104 ZNF56Q15929 161 aa6.8□□□□□ -1.32
USP11-208ENST00000480104 SMUG1Q53HV7 270 aa6.8□□□□□ -1.32
USP11-208ENST00000480104 CHCHD10Q8WYQ3 142 aaPredicted RBP6.8□□□□□ -1.32
USP11-208ENST00000480104 M0R2T5 61 aa6.79□□□□□ -1.32
USP11-208ENST00000480104 ARMS2P0C7Q2 107 aa6.79□□□□□ -1.32
USP11-208ENST00000480104 FGF6P10767 208 aa6.79□□□□□ -1.32
USP11-208ENST00000480104 RAB4BP61018 213 aa6.79□□□□□ -1.32
USP11-208ENST00000480104 ZFP69Q49AA0 526 aa6.79□□□□□ -1.32
USP11-208ENST00000480104 NPCDR1Q9BY65 106 aa6.79□□□□□ -1.32
USP11-208ENST00000480104 BCAP31P51572 246 aa6.78□□□□□ -1.32
USP11-208ENST00000480104 FOXI1Q12951 378 aa6.78□□□□□ -1.32
USP11-208ENST00000480104 EIF5AL1Q6IS14 154 aaKnown RBP6.78□□□□□ -1.32
USP11-208ENST00000480104 SDHCQ99643 169 aaPredicted RBP6.78□□□□□ -1.32
USP11-208ENST00000480104 RPL18AQ02543 176 aaKnown RBP6.77□□□□□ -1.33
USP11-208ENST00000480104 IAH1Q2TAA2 248 aaPredicted RBP6.77□□□□□ -1.33
USP11-208ENST00000480104 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
USP11-208ENST00000480104 FAM74A1Q5RGS3 127 aa6.77□□□□□ -1.33
USP11-208ENST00000480104 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
USP11-208ENST00000480104 TMEM243Q9BU79 118 aa6.77□□□□□ -1.33
USP11-208ENST00000480104 B4DEV8 164 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms