RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 TSKUQ8WUA8 353 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 ZNF414Q96IQ9 312 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 PSG8Q9UQ74 426 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 A0A1B0GV50 99 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 IZUMO1RA6ND01 250 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 ISLRO14498 428 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 HSBP1O75506 76 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 CT45A10P0DMU9 189 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 HIST1H1EP10412 219 aaKnown RBP4.61□□□□□ -1.67
SF3B1-209ENST00000479532 HLA-DRB4P13762 266 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 RPL32P62910 135 aaKnown RBP4.61□□□□□ -1.67
SF3B1-209ENST00000479532 RPP25LQ8N5L8 163 aaKnown RBP4.61□□□□□ -1.67
SF3B1-209ENST00000479532 VGLL1Q99990 258 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 C1QTNF4Q9BXJ3 329 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 TMEM126AQ9H061 195 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 GTSF1LQ9H1H1 148 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 SPANXB1Q9NS25 103 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-209ENST00000479532 HIGD1BQ9P298 99 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 HSPB8Q9UJY1 196 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 SPCS1Q9Y6A9 102 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 SELENOKQ9Y6D0 94 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 HLA-DRB4X5D2U9 266 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 DNHD1Q96M86 4753 aa4.61□□□□□ -1.67
SF3B1-209ENST00000479532 TRAV34A0A0B4J273 112 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 TEX48A0A1B0GUV7 120 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 USP17L23D6RBM5 183 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 TMEM262E9PQX1 116 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 SYS1-DBNDD2H3BUS1 97 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 M0QXV9 152 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 HERV-K104P63124 156 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 PIK3CD-AS1Q5SR53 167 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 PATE2Q6UY27 113 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 NHLRC2Q8NBF2 726 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 RNF183Q96D59 192 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 SLC50A1Q9BRV3 221 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 SMAD5-AS1Q9Y6J3 95 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 TRRAPQ9Y4A5 3859 aa4.6□□□□□ -1.67
SF3B1-209ENST00000479532 A0A087X0K7 114 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 SMIM27A0A1W2PRY6 76 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 K7EQG2 157 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 DEFB121Q5J5C9 76 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 GCSAMLQ5JQS6 135 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 LINC01545Q5VT33 79 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 PQLC2Q6ZP29 291 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 Q6ZVH6 145 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 FAM231DQ6ZW35 169 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 MIR17HGQ75NE6 70 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 MRAPQ8TCY5 172 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 PAXXQ9BUH6 204 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 MSRB1Q9NZV6 116 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 TMEM14CQ9P0S9 112 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 RFNGQ9Y644 331 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 V9GYV3 84 aa4.59□□□□□ -1.67
SF3B1-209ENST00000479532 TRAV5A0A0B4J249 113 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 A0A1B0GW15 77 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 H3BMG7 143 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 M0R2Z0 102 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 CXorf1O96002 111 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 APCSP02743 223 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 CD7P09564 240 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 ZNF688P0C7X2 276 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 SRIP30626 198 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 DEFB131AP59861 70 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 UBE2L3P68036 154 aaKnown RBP4.58□□□□□ -1.68
SF3B1-209ENST00000479532 PDE6HQ13956 83 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 TAL2Q16559 108 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 EBLN2Q6P2I7 272 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 C2orf91Q6ZV80 131 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 STHQ8IWL8 128 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 DCANP1Q8TF63 244 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 GTSF1Q8WW33 167 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 PTH2Q96A98 100 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 SLC25A2Q9BXI2 301 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 MAP1LC3CQ9BXW4 147 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 MAP6D1Q9H9H5 199 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 CMYA5Q8N3K9 4069 aa4.58□□□□□ -1.68
SF3B1-209ENST00000479532 SORL1Q92673 2214 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 A8MZ25 164 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 PRB2P02812 416 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-209ENST00000479532 IGHV4-30-4P0DP06 118 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 PYYP10082 97 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 EVI2AP22794 236 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 ASIPP42127 132 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 CSN1S1P47710 185 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 MORN5Q5VZ52 161 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 SPATA31B1PQ5VZV4 182 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 RCHY1Q96PM5 261 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 TPPP3Q9BW30 176 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 ZNF331Q9NQX6 463 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-209ENST00000479532 TMEM167BQ9NRX6 74 aa4.57□□□□□ -1.68
SF3B1-209ENST00000479532 TRBV19A0A075B6N1 114 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 LOC102724200A0A096LPH7 203 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-209ENST00000479532 IGHV1-24A0A0C4DH33 117 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 GAGE12JA6NER3 117 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 E9PLD3 99 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 H3BUT2 72 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 K7EIL1 84 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 SOCS3O14543 225 aa4.56□□□□□ -1.68
SF3B1-209ENST00000479532 MRPS12O15235 138 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms