RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 HSPG2P98160 4391 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 A0A087X0K7 114 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 hDV102S1A0JD36 115 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 FNDC10F2Z333 226 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 H3BUT2 72 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 LEPROTL1O95214 131 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 TSPAN13O95857 204 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 APOHP02749 345 aaPredicted RBP4.86□□□□□ -1.63
VCP-205ENST00000479300 IL4P05112 153 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 ZNF688P0C7X2 276 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 FABP2P12104 132 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 KIR3DS1Q14943 382 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 PSMG4Q5JS54 123 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 PVRIGQ6DKI7 326 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 NPIPB3Q92617 1050 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 ZNF414Q96IQ9 312 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 IGF2BP2-AS1Q96M15 143 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 C1QTNF4Q9BXJ3 329 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 GTSF1LQ9H1H1 148 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 AP5S1Q9NUS5 200 aa4.86□□□□□ -1.63
VCP-205ENST00000479300 IGHV1-24A0A0C4DH33 117 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 TEX48A0A1B0GUV7 120 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 A0A1B0GXF2 115 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 K7EQG2 157 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 K7EQM0 130 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 IGLV2-8P01709 118 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 FGF6P10767 208 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 ID1P41134 155 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 NANOS2P60321 138 aaKnown RBP4.85□□□□□ -1.63
VCP-205ENST00000479300 PQLC2Q6ZP29 291 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 BLNKQ8WV28 456 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 URB1-AS1Q96HZ7 61 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 ZNF479Q96JC4 524 aa4.85□□□□□ -1.63
VCP-205ENST00000479300 GEMIN7Q9H840 131 aaKnown RBP4.85□□□□□ -1.63
VCP-205ENST00000479300 MRPL16Q9NX20 251 aaKnown RBP4.85□□□□□ -1.63
VCP-205ENST00000479300 MRPL36Q9P0J6 103 aaKnown RBP4.85□□□□□ -1.63
VCP-205ENST00000479300 A0A1W2PRE2 83 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 PRSS46E5RG02 174 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 F8W1H4 67 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 H0Y8G0 127 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 IGKV1-17P01599 117 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 MED14OSP0DP75 135 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 MIFP14174 115 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 TCL1AP56279 114 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 RPL24P83731 157 aaKnown RBP4.84□□□□□ -1.63
VCP-205ENST00000479300 GCSAMLQ5JQS6 135 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 SIGLEC15Q6ZMC9 328 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 BOD1L2Q8IYS8 172 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 MGST2Q99735 147 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 RNASE7Q9H1E1 156 aaKnown RBP4.84□□□□□ -1.63
VCP-205ENST00000479300 CDIP1Q9H305 208 aa4.84□□□□□ -1.63
VCP-205ENST00000479300 C11orf68Q9H3H3 251 aaKnown RBP4.84□□□□□ -1.63
VCP-205ENST00000479300 KNCNA6PVL3 124 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 SPINK4O60575 86 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 TCTAP57738 103 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 TAS2R45P59539 299 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 LYZP61626 148 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 HBBP68871 147 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 CT83Q5H943 113 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 GDF5OSQ5U4N7 250 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 MIC13Q5XKP0 118 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 TRPT1Q86TN4 253 aaKnown RBP4.83□□□□□ -1.64
VCP-205ENST00000479300 NUP35Q8NFH5 326 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 RNF125Q96EQ8 232 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 GPR82Q96P67 336 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 VGLL1Q99990 258 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 NDFIP1Q9BT67 221 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 SPANXB1Q9NS25 103 aaPredicted RBP4.83□□□□□ -1.64
VCP-205ENST00000479300 HIGD1BQ9P298 99 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 TP73-AS1Q9UF72 201 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 APLNQ9ULZ1 77 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 HERC1Q15751 4861 aa4.83□□□□□ -1.64
VCP-205ENST00000479300 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.82□□□□□ -1.64
VCP-205ENST00000479300 RTL8CO15255 209 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 DEFB4AO15263 64 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 BUB3O43684 328 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 SMIM13P0DJ93 91 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 CT45A10P0DMU9 189 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 MGST1P10620 155 aaKnown RBP4.82□□□□□ -1.64
VCP-205ENST00000479300 LGALS9BQ3B8N2 356 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 SPATA31B1PQ5VZV4 182 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 TEPPQ6URK8 271 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 ATP6V0E2Q8NHE4 81 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 DCANP1Q8TF63 244 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 GLMPQ8WWB7 406 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 MRPL32Q9BYC8 188 aaKnown RBP4.82□□□□□ -1.64
VCP-205ENST00000479300 SPANXA1Q9NS26 97 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 CYSLTR1Q9Y271 337 aa4.82□□□□□ -1.64
VCP-205ENST00000479300 TRAV10A0A0B4J240 114 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 IGHV4-28A0A0C4DH34 117 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 IGLL5B9A064 214 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 CSN1S1P47710 185 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 LINC00173Q6ZV60 143 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 GATD1Q8NB37 220 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 C16orf92Q96LL3 132 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 TRGV9Q99603 122 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 GFRA4Q9GZZ7 299 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 VCX2Q9H322 139 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 ZNF492Q9P255 531 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 XCL2Q9UBD3 114 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms