RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SVEP1Q4LDE5 3571 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 ZANQ9Y493 2812 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 LOC389332A0A1B0GUA5 103 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 CBY3A6NI87 242 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 KNCNA6PVL3 124 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 A8MWV9 139 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 H7C1H1 209 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 ATP5LO75964 103 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 IGKV3-20P01619 116 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 PF4P02776 101 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 DDTP30046 118 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 SUMO2P61956 95 aaKnown RBP5.85□□□□□ -1.47
VMA21-203ENST00000477649 LAGE3Q14657 143 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 KIR3DS1Q14943 382 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 BEAN1Q3B7T3 259 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 ODF3L2Q3SX64 289 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 MORN3Q6PF18 240 aaPredicted RBP5.85□□□□□ -1.47
VMA21-203ENST00000477649 TRPT1Q86TN4 253 aaKnown RBP5.85□□□□□ -1.47
VMA21-203ENST00000477649 C11orf44Q8N8P7 122 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 Q8N976 141 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 ZNF747Q9BV97 191 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 SMIM2Q9BVW6 85 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 EDA2RQ9HAV5 297 aa5.85□□□□□ -1.47
VMA21-203ENST00000477649 TIMM8BQ9Y5J9 83 aaPredicted RBP5.85□□□□□ -1.47
VMA21-203ENST00000477649 IGLV2-18A0A075B6J9 118 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 TRAV12-2A0A075B6T6 113 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 TRAV9-2A0A087WT02 112 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 TRBV6-5A0A0K0K1A5 114 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 HSBP1L1C9JCN9 74 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 M0R2P5 195 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 RHODO00212 210 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 NCR2O95944 276 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 LBHQ53QV2 105 aaPredicted RBP5.84□□□□□ -1.47
VMA21-203ENST00000477649 LINC01545Q5VT33 79 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 CDPF1Q6NVV7 123 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 Q6ZQT7 251 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 C14orf178Q8N769 122 aaPredicted RBP5.84□□□□□ -1.47
VMA21-203ENST00000477649 MCRIP2Q9BUT9 160 aaKnown RBP5.84□□□□□ -1.47
VMA21-203ENST00000477649 SELENOKQ9Y6D0 94 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 KIF25-AS1Q9Y6Z4 181 aa5.84□□□□□ -1.47
VMA21-203ENST00000477649 MAP1AP78559 2803 aaPredicted RBP5.83□□□□□ -1.48
VMA21-203ENST00000477649 MXRA5Q9NR99 2828 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 SMKR1H3BMG3 65 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 VCYO14598 125 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 CIDEAO60543 219 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 MGPP08493 103 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 DEFA6Q01524 100 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 LGALS9BQ3B8N2 356 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 NSUN5P1Q3KNT7 163 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 ZNF876PQ49A33 203 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 C9orf66Q5T8R8 295 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 LGALS9CQ6DKI2 356 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 ZNF705AQ6ZN79 300 aaPredicted RBP5.83□□□□□ -1.48
VMA21-203ENST00000477649 LINC00482Q8N8I6 264 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 IFI27L1Q96BM0 104 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 LINC01587Q99440 93 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 MIEN1Q9BRT3 115 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 ST20Q9HBF5 79 aa5.83□□□□□ -1.48
VMA21-203ENST00000477649 NIPBLQ6KC79 2804 aaeCLIP5.83□□□□□ -1.48
VMA21-203ENST00000477649 A0A096LNJ9 63 aa5.82□□□□□ -1.48
VMA21-203ENST00000477649 RBMY1BA6NDE4 496 aaKnown RBP5.82□□□□□ -1.48
VMA21-203ENST00000477649 RBMY1EA6NEQ0 496 aaKnown RBP5.82□□□□□ -1.48
VMA21-203ENST00000477649 RBMY1DP0C7P1 496 aaKnown RBP5.82□□□□□ -1.48
VMA21-203ENST00000477649 LINC00315P59091 139 aa5.82□□□□□ -1.48
VMA21-203ENST00000477649 RASL10AQ92737 203 aa5.82□□□□□ -1.48
VMA21-203ENST00000477649 MDFICQ9P1T7 246 aa5.82□□□□□ -1.48
VMA21-203ENST00000477649 UQCR10Q9UDW1 63 aa5.82□□□□□ -1.48
VMA21-203ENST00000477649 GOLT1BQ9Y3E0 138 aa5.82□□□□□ -1.48
VMA21-203ENST00000477649 TLN2Q9Y4G6 2542 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 LINC00587B1AMM8 73 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 F5H697 171 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 CRYGDP07320 174 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 SPATA45Q537H7 98 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 PRR31Q5SQ13 230 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 KIR2DL4Q99706 377 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 CITED1Q99966 193 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 TMEM208Q9BTX3 173 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 PRO1933Q9H354 126 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 PAM16Q9Y3D7 125 aa5.81□□□□□ -1.48
VMA21-203ENST00000477649 SONP18583 2426 aaKnown RBP5.81□□□□□ -1.48
VMA21-203ENST00000477649 ANK3Q12955 4377 aaKnown RBP5.8□□□□□ -1.48
VMA21-203ENST00000477649 TRBV27A0A0K0K1C4 114 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 NUDT3O95989 172 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 RBMY1A1P0DJD3 496 aaKnown RBP5.8□□□□□ -1.48
VMA21-203ENST00000477649 RBMY1CP0DJD4 496 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 POLR2KP53803 58 aaKnown RBP5.8□□□□□ -1.48
VMA21-203ENST00000477649 RIPPLY3P57055 190 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 RBMY1FQ15415 496 aaKnown RBP5.8□□□□□ -1.48
VMA21-203ENST00000477649 RHOHQ15669 191 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 SUMO4Q6EEV6 95 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 ZFP2Q6ZN57 461 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 GTSCR1Q86UQ5 136 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 TMEM158Q8WZ71 300 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 DNAJC30Q96LL9 226 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 PMCHL2Q9BQD1 86 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 C19orf73Q9NVV2 129 aa5.8□□□□□ -1.48
VMA21-203ENST00000477649 TRAV12-1A0A0B4J245 112 aa5.79□□□□□ -1.48
VMA21-203ENST00000477649 TRAV26-2A0A0B4J265 109 aa5.79□□□□□ -1.48
VMA21-203ENST00000477649 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.79□□□□□ -1.48
VMA21-203ENST00000477649 M0QY20 66 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms