RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 FAM74A4Q5TZK3 123 aa10.79□□□□□ -0.68
SEC13-215ENST00000477547 CEMP1Q6PRD7 247 aaPredicted RBP10.79□□□□□ -0.68
SEC13-215ENST00000477547 NAT8BQ9UHF3 227 aa10.79□□□□□ -0.68
SEC13-215ENST00000477547 A0A087WWL8 130 aa10.78□□□□□ -0.68
SEC13-215ENST00000477547 IGHV3-73A0A0B4J1V6 119 aa10.78□□□□□ -0.68
SEC13-215ENST00000477547 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
SEC13-215ENST00000477547 RHODO00212 210 aa10.78□□□□□ -0.68
SEC13-215ENST00000477547 RHEBQ15382 184 aa10.78□□□□□ -0.68
SEC13-215ENST00000477547 SVBPQ8N300 66 aa10.78□□□□□ -0.68
SEC13-215ENST00000477547 CLRN3Q8NCR9 226 aa10.78□□□□□ -0.68
SEC13-215ENST00000477547 KLK5Q9Y337 293 aaPredicted RBP10.78□□□□□ -0.68
SEC13-215ENST00000477547 IGHV4-4A0A075B6R2 117 aa10.77□□□□□ -0.69
SEC13-215ENST00000477547 TRGC1P0CF51 173 aa10.77□□□□□ -0.69
SEC13-215ENST00000477547 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.69
SEC13-215ENST00000477547 TWIST1Q15672 202 aa10.77□□□□□ -0.69
SEC13-215ENST00000477547 TMEM88Q6PEY1 159 aa10.77□□□□□ -0.69
SEC13-215ENST00000477547 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
SEC13-215ENST00000477547 SAMD10Q9BYL1 202 aa10.77□□□□□ -0.69
SEC13-215ENST00000477547 MSRB1Q9NZV6 116 aa10.77□□□□□ -0.69
SEC13-215ENST00000477547 A0A1B0GUT8 65 aa10.76□□□□□ -0.69
SEC13-215ENST00000477547 C7orf77A4D0Y5 90 aa10.76□□□□□ -0.69
SEC13-215ENST00000477547 CIDEAO60543 219 aa10.76□□□□□ -0.69
SEC13-215ENST00000477547 SNAPINO95295 136 aa10.76□□□□□ -0.69
SEC13-215ENST00000477547 SMIM17P0DL12 118 aa10.76□□□□□ -0.69
SEC13-215ENST00000477547 NTF3P20783 257 aa10.76□□□□□ -0.69
SEC13-215ENST00000477547 FHL2Q14192 279 aa10.76□□□□□ -0.69
SEC13-215ENST00000477547 WDR73Q6P4I2 378 aa10.76□□□□□ -0.69
SEC13-215ENST00000477547 CTDSP1Q9GZU7 261 aa10.76□□□□□ -0.69
SEC13-215ENST00000477547 TRAV26-1A0A087WT03 109 aa10.75□□□□□ -0.69
SEC13-215ENST00000477547 A0A0J9YY99 117 aa10.75□□□□□ -0.69
SEC13-215ENST00000477547 IGLL5B9A064 214 aa10.75□□□□□ -0.69
SEC13-215ENST00000477547 CRYGDP07320 174 aa10.75□□□□□ -0.69
SEC13-215ENST00000477547 ZNF56Q15929 161 aa10.75□□□□□ -0.69
SEC13-215ENST00000477547 UFSP1Q6NVU6 142 aa10.75□□□□□ -0.69
SEC13-215ENST00000477547 ZFP2Q6ZN57 461 aa10.75□□□□□ -0.69
SEC13-215ENST00000477547 C14orf178Q8N769 122 aaPredicted RBP10.75□□□□□ -0.69
SEC13-215ENST00000477547 RPS10P5Q9NQ39 176 aa10.75□□□□□ -0.69
SEC13-215ENST00000477547 PRO0255Q9UI72 69 aa10.75□□□□□ -0.69
SEC13-215ENST00000477547 MGPP08493 103 aa10.74□□□□□ -0.69
SEC13-215ENST00000477547 GATA1P15976 413 aaPredicted RBP10.74□□□□□ -0.69
SEC13-215ENST00000477547 RIGQ13278 110 aa10.74□□□□□ -0.69
SEC13-215ENST00000477547 FAM210BQ96KR6 192 aa10.74□□□□□ -0.69
SEC13-215ENST00000477547 A0A087WWC5 75 aa10.73□□□□□ -0.69
SEC13-215ENST00000477547 PAX4O43316 350 aa10.73□□□□□ -0.69
SEC13-215ENST00000477547 EVI2AP22794 236 aa10.73□□□□□ -0.69
SEC13-215ENST00000477547 CRYBA4P53673 196 aa10.73□□□□□ -0.69
SEC13-215ENST00000477547 SLAQ13239 276 aa10.73□□□□□ -0.69
SEC13-215ENST00000477547 MRPL54Q6P161 138 aaKnown RBP10.73□□□□□ -0.69
SEC13-215ENST00000477547 SMIM15Q7Z3B0 74 aa10.73□□□□□ -0.69
SEC13-215ENST00000477547 DPH3P1Q9H4G8 78 aa10.73□□□□□ -0.69
SEC13-215ENST00000477547 HHLA3Q9XRX5 114 aa10.73□□□□□ -0.69
SEC13-215ENST00000477547 K7EQD1 137 aa10.72□□□□□ -0.69
SEC13-215ENST00000477547 FAM3BP58499 235 aaPredicted RBP10.72□□□□□ -0.69
SEC13-215ENST00000477547 RHOHQ15669 191 aa10.72□□□□□ -0.69
SEC13-215ENST00000477547 KCNIP4Q6PIL6 250 aa10.72□□□□□ -0.69
SEC13-215ENST00000477547 KIF25-AS1Q9Y6Z4 181 aa10.72□□□□□ -0.69
SEC13-215ENST00000477547 ALMS1Q8TCU4 4167 aa10.71□□□□□ -0.69
SEC13-215ENST00000477547 SLC25A29Q8N8R3 303 aa10.71□□□□□ -0.69
SEC13-215ENST00000477547 C15orf53Q8NAA6 179 aa10.71□□□□□ -0.69
SEC13-215ENST00000477547 VSIG2Q96IQ7 327 aa10.71□□□□□ -0.69
SEC13-215ENST00000477547 IMMP2LQ96T52 175 aa10.71□□□□□ -0.69
SEC13-215ENST00000477547 A0A1B0GW15 77 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 TRBV6-4A0A1B0GX49 114 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 F5H697 171 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 NUDT3O95989 172 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 S100PP25815 95 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 HBBP68871 147 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 Q6ZSN1 163 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 ATP5L2Q7Z4Y8 100 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 PRADC1Q9BSG0 188 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 TMEM242Q9NWH2 141 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 FRAS1Q86XX4 4008 aa10.7□□□□□ -0.7
SEC13-215ENST00000477547 A0A1B0GXF2 115 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 H3BNG1 76 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 S100A8P05109 93 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 GYPEP15421 78 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 CAMPP49913 170 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 TCTAP57738 103 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 RAB4BP61018 213 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 BTF3L4Q96K17 158 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 ICOSQ9Y6W8 199 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 URGCP-MRPS24S4R325 110 aa10.69□□□□□ -0.7
SEC13-215ENST00000477547 LOC100131303A0A0U1RQF7 123 aa10.68□□□□□ -0.7
SEC13-215ENST00000477547 LINC00315P59091 139 aa10.68□□□□□ -0.7
SEC13-215ENST00000477547 SUMO4Q6EEV6 95 aa10.68□□□□□ -0.7
SEC13-215ENST00000477547 TMEM191AQ9H0A3 160 aa10.68□□□□□ -0.7
SEC13-215ENST00000477547 APLNQ9ULZ1 77 aa10.68□□□□□ -0.7
SEC13-215ENST00000477547 RYR1P21817 5038 aa10.68□□□□□ -0.7
SEC13-215ENST00000477547 TRAV9-1A0A075B6T8 112 aa10.67□□□□□ -0.7
SEC13-215ENST00000477547 ATRAIDQ6UW56 229 aa10.67□□□□□ -0.7
SEC13-215ENST00000477547 A0A096LPF7 62 aa10.66□□□□□ -0.7
SEC13-215ENST00000477547 P0DMU3 169 aa10.66□□□□□ -0.7
SEC13-215ENST00000477547 FAM231AP0DMU4 169 aa10.66□□□□□ -0.7
SEC13-215ENST00000477547 FAM231CP0DMU5 169 aa10.66□□□□□ -0.7
SEC13-215ENST00000477547 SRIP30626 198 aa10.66□□□□□ -0.7
SEC13-215ENST00000477547 AMN1Q8IY45 258 aa10.66□□□□□ -0.7
SEC13-215ENST00000477547 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.7
SEC13-215ENST00000477547 H7C1H1 209 aa10.65□□□□□ -0.7
SEC13-215ENST00000477547 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.7
SEC13-215ENST00000477547 TRAV26-2A0A0B4J265 109 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms