RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 IL4P05112 153 aa3□□□□□ -1.93
USP16-205ENST00000474835 IGHV1-8P0DP01 117 aa3□□□□□ -1.93
USP16-205ENST00000474835 MFAP4P55083 255 aa3□□□□□ -1.93
USP16-205ENST00000474835 PIK3CD-AS1Q5SR53 167 aa3□□□□□ -1.93
USP16-205ENST00000474835 MRAPQ8TCY5 172 aa3□□□□□ -1.93
USP16-205ENST00000474835 KLK15Q9H2R5 256 aa3□□□□□ -1.93
USP16-205ENST00000474835 M0R3E3 92 aa3□□□□□ -1.93
USP16-205ENST00000474835 ZNF415Q09FC8 603 aa3□□□□□ -1.93
USP16-205ENST00000474835 FLYWCH2Q96CP2 140 aaKnown RBP3□□□□□ -1.93
USP16-205ENST00000474835 SGK494Q96LW2 274 aa3□□□□□ -1.93
USP16-205ENST00000474835 PRRC2AP48634 2157 aaKnown RBP3□□□□□ -1.93
USP16-205ENST00000474835 CKS2P33552 79 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 TMEM258P61165 79 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 PAPPA-AS1Q5QFB9 102 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 LINC00643Q86TS7 51 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 DAZAP1Q96EP5 407 aaKnown RBP2.99□□□□□ -1.93
USP16-205ENST00000474835 C20orf173Q96LM9 149 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 LINC00467Q9BRT7 94 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 TIMM21Q9BVV7 248 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 KIAA0100Q14667 2235 aaKnown RBP2.99□□□□□ -1.93
USP16-205ENST00000474835 LOC107984640A0A0U1RRK4 108 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 TMEM178BH3BS89 294 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 BUB1B-PAK6H3BSN5 160 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 IGHV3-9P01782 118 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 SUMO2P61956 95 aaKnown RBP2.99□□□□□ -1.93
USP16-205ENST00000474835 FOXC1Q12948 553 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 GAGE2BQ13066 116 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 GAGE2EQ4V326 116 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 MEIG1Q5JSS6 88 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 HES3Q5TGS1 186 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 SPINK14Q6IE38 97 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 C9orf106Q8NAJ2 232 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 CHCHD5Q9BSY4 110 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 GAGE2DQ9UEU5 116 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 A4D1N5 150 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 NPFFO15130 113 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 HERVK_113P63121 156 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 NDPQ00604 133 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 MIAQ16674 131 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 LYRM7Q5U5X0 104 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 PMS2CLQ68D20 193 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 VPS13DQ5THJ4 4388 aa2.99□□□□□ -1.93
USP16-205ENST00000474835 NCBP2LA6PVI3 153 aaKnown RBP2.98□□□□□ -1.93
USP16-205ENST00000474835 OOSP1A8MZH6 123 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 C9JAW5 83 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 J3KT08 172 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 TRACP01848 142 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 CCL4P13236 92 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 FABP6P51161 128 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 ATXN8Q156A1 80 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 ZNF625Q96I27 306 aaPredicted RBP2.98□□□□□ -1.93
USP16-205ENST00000474835 CCDC140Q96MF4 163 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 HIST1H4GQ99525 98 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 DNAJC13O75165 2243 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 IGKV2-40A0A087WW87 121 aaPredicted RBP2.98□□□□□ -1.93
USP16-205ENST00000474835 IBA57-AS1B1ANH7 110 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 IGKV2D-40P01614 121 aaPredicted RBP2.98□□□□□ -1.93
USP16-205ENST00000474835 GRPP07492 148 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 UCNP55089 124 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 PMVKQ15126 192 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 RHOHQ15669 191 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 Q6JHZ5 121 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 FP248Q71RG6 208 aaPredicted RBP2.98□□□□□ -1.93
USP16-205ENST00000474835 YAF2Q8IY57 180 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 KLHL30-AS1Q8NEE0 82 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 FAM215AQ9Y5M1 114 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 ICOSQ9Y6W8 199 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 CSMD3Q7Z407 3707 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 LOC389332A0A1B0GUA5 103 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 SIRPDQ9H106 197 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 RNF7Q9UBF6 113 aa2.98□□□□□ -1.93
USP16-205ENST00000474835 ZGRF1Q86YA3 2104 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 TRBV10-3A0A0K0K1G6 114 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 F5H768 121 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 H3BMM0 161 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 CFHR3Q02985 330 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 C2orf66Q6UXQ4 117 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 SOSTDC1Q6X4U4 206 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 FAM110DQ8TAY7 271 aaPredicted RBP2.97□□□□□ -1.93
USP16-205ENST00000474835 NTN5Q8WTR8 489 aaPredicted RBP2.97□□□□□ -1.93
USP16-205ENST00000474835 UBE2WQ96B02 151 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 UBE2D4Q9Y2X8 147 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 IGLV4-3A0A075B6K6 122 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 M0QY20 66 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 SCGB1C2P0DMR2 95 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 PSMB2P49721 201 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 C9orf129Q5T035 196 aaKnown RBP2.97□□□□□ -1.93
USP16-205ENST00000474835 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.97□□□□□ -1.93
USP16-205ENST00000474835 I3L3M4 83 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 J3QQQ9 107 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 CD3EP07766 207 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 KLKP1Q107X0 134 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 LCE2AQ5TA79 106 aaPredicted RBP2.97□□□□□ -1.93
USP16-205ENST00000474835 ASCL5Q7RTU5 278 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 MUSTN1Q8IVN3 82 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 RPL39LQ96EH5 51 aaKnown RBP2.97□□□□□ -1.93
USP16-205ENST00000474835 FAM218AQ96MZ4 157 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 DPH3P1Q9H4G8 78 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 ENY2Q9NPA8 101 aa2.97□□□□□ -1.93
USP16-205ENST00000474835 GNG12Q9UBI6 72 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms