RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 OR11H4Q8NGC9 324 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 PRO0255Q9UI72 69 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 PSG8Q9UQ74 426 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 ARL2-SNX15V9GYD0 113 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
VPS50-211ENST00000474412 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 IGHV3-73A0A0B4J1V6 119 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 TRAV4A0A0B4J268 109 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 CTXND1A0A1B0GTU2 59 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 A0A1B0GV50 99 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 MAP1LC3B2A6NCE7 125 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 C16orf90A8MZG2 172 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 SIVA1O15304 175 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 CXorf1O96002 111 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 TTC32Q5I0X7 151 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 ZNF506Q5JVG8 444 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
VPS50-211ENST00000474412 LYPD5Q6UWN5 251 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 SPATA12Q7Z6I5 190 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 INO80EQ8NBZ0 244 aaPredicted RBP4.69□□□□□ -1.66
VPS50-211ENST00000474412 ASB13Q8WXK3 278 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 RASL10AQ92737 203 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 C9orf85Q96MD7 179 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 ACTR3CQ9C0K3 210 aaPredicted RBP4.69□□□□□ -1.66
VPS50-211ENST00000474412 MAP1LC3BQ9GZQ8 125 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 EPDR1Q9UM22 224 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 HHLA3Q9XRX5 114 aa4.69□□□□□ -1.66
VPS50-211ENST00000474412 IGKV3D-20A0A0C4DH25 116 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 PGPEP1LA6NFU8 196 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 FAM74A7A6NL05 159 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 C9JCJ5 164 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 M0R2P5 195 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 PEX7O00628 323 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 PFN1P07737 140 aaKnown RBP4.68□□□□□ -1.66
VPS50-211ENST00000474412 GATA1P15976 413 aaPredicted RBP4.68□□□□□ -1.66
VPS50-211ENST00000474412 SRIP30626 198 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 SERF2P84101 59 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 OR4C5Q8NGB2 326 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 ZC2HC1AQ96GY0 325 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 SPXQ9BT56 116 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 NDFIP1Q9BT67 221 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 JPT2Q9H910 190 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 TMEM167BQ9NRX6 74 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 Q9UF83 564 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 ABCA13Q86UQ4 5058 aa4.68□□□□□ -1.66
VPS50-211ENST00000474412 BORCS7-ASMTA0A0B4J1R7 106 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 SERTM2A0A1B0GWG4 89 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 A0A1W2PPQ1 181 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 A0A1W2PRE2 83 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 H3BVH4 76 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 M0R036 132 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 MBP02144 154 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 MRPL23Q16540 153 aaKnown RBP4.67□□□□□ -1.66
VPS50-211ENST00000474412 SMUG1Q53HV7 270 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 AKR1C8PQ5T2L2 129 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 CFAP126Q5VTH2 177 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 NEGR1Q7Z3B1 354 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 ARL6IP6Q8N6S5 226 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 STPG4Q8N801 248 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 NHLRC2Q8NBF2 726 aa4.67□□□□□ -1.66
VPS50-211ENST00000474412 GRIFINA4D1Z8 144 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 FBLL1A6NHQ2 334 aaKnown RBP4.66□□□□□ -1.66
VPS50-211ENST00000474412 RS1O15537 224 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 SH2D1AO60880 128 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 IFNA7P01567 189 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 CRIP1P50238 77 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 RPL19P84098 196 aaKnown RBP4.66□□□□□ -1.66
VPS50-211ENST00000474412 ZNF876PQ49A33 203 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 ZFP69Q49AA0 526 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 KCNRGQ8N5I3 272 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 SLC25A29Q8N8R3 303 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 PCNPQ8WW12 178 aaKnown RBP4.66□□□□□ -1.66
VPS50-211ENST00000474412 KCNS1Q96KK3 526 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 SAMD10Q9BYL1 202 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 PARLQ9H300 379 aa4.66□□□□□ -1.66
VPS50-211ENST00000474412 TMSB15BA0A087X1C1 80 aa4.65□□□□□ -1.67
VPS50-211ENST00000474412 K7EQM0 130 aa4.65□□□□□ -1.67
VPS50-211ENST00000474412 BCL2L11O43521 198 aa4.65□□□□□ -1.67
VPS50-211ENST00000474412 CIDEAO60543 219 aa4.65□□□□□ -1.67
VPS50-211ENST00000474412 LINC00694P0DN24 101 aa4.65□□□□□ -1.67
VPS50-211ENST00000474412 ZNF345Q14585 488 aa4.65□□□□□ -1.67
VPS50-211ENST00000474412 FAM213BQ8TBF2 198 aa4.65□□□□□ -1.67
VPS50-211ENST00000474412 ZNF471Q9BX82 626 aaPredicted RBP4.65□□□□□ -1.67
VPS50-211ENST00000474412 LY96Q9Y6Y9 160 aa4.65□□□□□ -1.67
VPS50-211ENST00000474412 SMIM1B2RUZ4 78 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 TAAR5O14804 337 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 IGHV3-30P01768 117 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 IGHV3-33P01772 117 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 ORM1P02763 201 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 IGHV3-30-3P0DP02 117 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 IGHV3-30-5P0DP03 117 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 ASIPP42127 132 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 AKR1C3P42330 323 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 PPT1P50897 306 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 HAMPP81172 84 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 SLAQ13239 276 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 RHOHQ15669 191 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 CST9LP1Q5W188 147 aa4.64□□□□□ -1.67
VPS50-211ENST00000474412 UFSP1Q6NVU6 142 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 199.3 ms