RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 F2Z2F3 143 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 PPP1R2P9O14990 202 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 P01737 135 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 PRM2P04554 102 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 S100A9P06702 114 aaKnown RBP3.31□□□□□ -1.88
UFD1-207ENST00000474226 S100A7P31151 101 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 MEOX2P50222 304 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 FOXA3P55318 350 aaPredicted RBP3.31□□□□□ -1.88
UFD1-207ENST00000474226 FXYD7P58549 80 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 DEFB131AP59861 70 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 ACTL10Q5JWF8 245 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 TMEM136Q6ZRR5 245 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 NDUFA11Q86Y39 141 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 APRG1Q8IVJ8 170 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 TSKUQ8WUA8 353 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 PGLYRP4Q96LB8 373 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 CITED1Q99966 193 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 SRD5A3Q9H8P0 318 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 TP53TG3Q9ULZ0 132 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 DNAH1Q9P2D7 4330 aa3.31□□□□□ -1.88
UFD1-207ENST00000474226 TRAV12-2A0A075B6T6 113 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 A8MTW9 85 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIGD1CA8MV81 97 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 KLLNB2CW77 178 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 K7EQM0 130 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 M0R2Z0 102 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 CRXO43186 299 aaPredicted RBP3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST1H2BKO60814 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 SAP30O75446 220 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 IGLV1-51P01701 117 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST1H2BJP06899 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 CD7P09564 240 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 ARMS2P0C7Q2 107 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 TRGC1P0CF51 173 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 IGLC6P0CF74 106 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 CRISP2P16562 243 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST1H2BOP23527 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST1H2BBP33778 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST1H2BDP58876 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST1H2BCP62807 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 FABP9Q0Z7S8 132 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST2H2BEQ16778 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 SMUG1Q53HV7 270 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.3□□□□□ -1.88
UFD1-207ENST00000474226 SAPCD1Q5SSQ6 148 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 FAM162BQ5T6X4 162 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 TMEM78Q5T7P6 136 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 Q6ZRP5 223 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 DYNLRB2Q8TF09 96 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST1H2BHQ93079 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST1H2BNQ99877 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HIST1H2BMQ99879 126 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 SAV1Q9H4B6 383 aaPredicted RBP3.3□□□□□ -1.88
UFD1-207ENST00000474226 COL7A1Q02388 2944 aa3.3□□□□□ -1.88
UFD1-207ENST00000474226 HERC1Q15751 4861 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 TRAV2A0A0B4J234 112 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 TMEM189A5PLL7 270 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 SNURFLB1AK76 121 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 H3BMM0 161 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 GNRH2O43555 120 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 NUPR1O60356 82 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 ZNF324O75467 553 aaPredicted RBP3.29□□□□□ -1.88
UFD1-207ENST00000474226 GIG44P09565 113 aaPredicted RBP3.29□□□□□ -1.88
UFD1-207ENST00000474226 S100PP25815 95 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 RNASE4P34096 147 aaKnown RBP3.29□□□□□ -1.88
UFD1-207ENST00000474226 ID1P41134 155 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 SSTP61278 116 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 SLAQ13239 276 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 SPINK13Q1W4C9 94 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 KCNIP4Q6PIL6 250 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 LYZL1Q6UWQ5 148 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 FOXI2Q6ZQN5 318 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 OR4B1Q8NGF8 309 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 OR10J6PQ8NGY7 276 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 BTF3L4Q96K17 158 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 SPAG8Q99932 426 aaPredicted RBP3.29□□□□□ -1.88
UFD1-207ENST00000474226 CLEC5AQ9NY25 188 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 SIGLEC8Q9NYZ4 499 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 NAT8BQ9UHF3 227 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 CSMD3Q7Z407 3707 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 KIAA1109Q2LD37 5005 aa3.29□□□□□ -1.88
UFD1-207ENST00000474226 TRAV9-1A0A075B6T8 112 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 TRAV12-3A0A0B4J271 114 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 TRAV25A0A0B4J276 109 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 C5orf52A6NGY3 159 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 FBLL1A6NHQ2 334 aaKnown RBP3.28□□□□□ -1.88
UFD1-207ENST00000474226 FABP5P3A8MUU1 101 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 A8MWL6 223 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 C1orf196B1AJZ1 125 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 H3BVH4 76 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 ORM1P02763 201 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 RNASE3P12724 160 aaKnown RBP3.28□□□□□ -1.88
UFD1-207ENST00000474226 HLA-DRB4P13762 266 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 AZU1P20160 251 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 BMI1P35226 326 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 CTRLP40313 264 aa3.28□□□□□ -1.88
UFD1-207ENST00000474226 SNRPD3P62318 126 aaKnown RBP3.28□□□□□ -1.88
UFD1-207ENST00000474226 RIGQ13278 110 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms