RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 MDFICQ9P1T7 246 aa7.59□□□□□ -1.19
SMARCD3-208ENST00000472789 C3orf84H3BNL1 204 aa7.58□□□□□ -1.2
SMARCD3-208ENST00000472789 NANOS2P60321 138 aaKnown RBP7.58□□□□□ -1.2
SMARCD3-208ENST00000472789 ZNF876PQ49A33 203 aa7.58□□□□□ -1.2
SMARCD3-208ENST00000472789 TMEM136Q6ZRR5 245 aa7.58□□□□□ -1.2
SMARCD3-208ENST00000472789 OR10AG1Q8NH19 301 aa7.58□□□□□ -1.2
SMARCD3-208ENST00000472789 MRPL18Q9H0U6 180 aaKnown RBP7.58□□□□□ -1.2
SMARCD3-208ENST00000472789 MUC21A0A0G2JKD1 596 aa7.57□□□□□ -1.2
SMARCD3-208ENST00000472789 MUC21A0A140T8X8 626 aa7.57□□□□□ -1.2
SMARCD3-208ENST00000472789 TRGC2P03986 189 aa7.57□□□□□ -1.2
SMARCD3-208ENST00000472789 DAZ2Q13117 558 aaKnown RBP7.57□□□□□ -1.2
SMARCD3-208ENST00000472789 LGALS9BQ3B8N2 356 aa7.57□□□□□ -1.2
SMARCD3-208ENST00000472789 GATD1Q8NB37 220 aa7.57□□□□□ -1.2
SMARCD3-208ENST00000472789 RNASE8Q8TDE3 154 aaKnown RBP7.57□□□□□ -1.2
SMARCD3-208ENST00000472789 GSN-AS1Q9NRJ2 163 aa7.57□□□□□ -1.2
SMARCD3-208ENST00000472789 A8MWV9 139 aa7.56□□□□□ -1.2
SMARCD3-208ENST00000472789 NXPH4O95158 308 aa7.56□□□□□ -1.2
SMARCD3-208ENST00000472789 PPBPP02775 128 aa7.56□□□□□ -1.2
SMARCD3-208ENST00000472789 SPART-AS1P0CW21 52 aa7.56□□□□□ -1.2
SMARCD3-208ENST00000472789 AZU1P20160 251 aa7.56□□□□□ -1.2
SMARCD3-208ENST00000472789 DMRTA1Q5VZB9 504 aa7.56□□□□□ -1.2
SMARCD3-208ENST00000472789 C11orf72Q8NBR9 251 aa7.56□□□□□ -1.2
SMARCD3-208ENST00000472789 DPH3P1Q9H4G8 78 aa7.56□□□□□ -1.2
SMARCD3-208ENST00000472789 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
SMARCD3-208ENST00000472789 CIDEAO60543 219 aa7.55□□□□□ -1.2
SMARCD3-208ENST00000472789 PPP1R17O96001 155 aa7.55□□□□□ -1.2
SMARCD3-208ENST00000472789 CASC10Q5T4H9 136 aa7.55□□□□□ -1.2
SMARCD3-208ENST00000472789 FAM222AQ5U5X8 452 aa7.55□□□□□ -1.2
SMARCD3-208ENST00000472789 FAM104BQ5XKR9 115 aa7.55□□□□□ -1.2
SMARCD3-208ENST00000472789 RASL10AQ92737 203 aa7.55□□□□□ -1.2
SMARCD3-208ENST00000472789 MSRB1Q9NZV6 116 aa7.55□□□□□ -1.2
SMARCD3-208ENST00000472789 TEX48A0A1B0GUV7 120 aa7.54□□□□□ -1.2
SMARCD3-208ENST00000472789 RHODO00212 210 aa7.54□□□□□ -1.2
SMARCD3-208ENST00000472789 S100A6P06703 90 aa7.54□□□□□ -1.2
SMARCD3-208ENST00000472789 EVI2AP22794 236 aa7.54□□□□□ -1.2
SMARCD3-208ENST00000472789 CKS2P33552 79 aa7.54□□□□□ -1.2
SMARCD3-208ENST00000472789 PHLDA1Q8WV24 401 aaPredicted RBP7.54□□□□□ -1.2
SMARCD3-208ENST00000472789 TRGV1A0A0A0MS02 117 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 NUPR2A6NF83 97 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 LYRM9A8MSI8 78 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 F5H697 171 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 DEFB130BP0DP73 79 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 DEFB130AP0DP74 79 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 DAD1P61803 113 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 SLAQ13239 276 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 C12orf74Q32Q52 190 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 Q6ZTC4 211 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 AMN1Q8IY45 258 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 ORMDL3Q8N138 153 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 C14orf178Q8N769 122 aaPredicted RBP7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 MRAP2Q96G30 205 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 NOP10Q9NPE3 64 aaKnown RBP7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 DKK2Q9UBU2 259 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 LAMTOR2Q9Y2Q5 125 aa7.53□□□□□ -1.2
SMARCD3-208ENST00000472789 TRGV2A0A075B6R0 118 aa7.52□□□□□ -1.21
SMARCD3-208ENST00000472789 H7C1H1 209 aa7.52□□□□□ -1.21
SMARCD3-208ENST00000472789 HTN3P15516 51 aa7.52□□□□□ -1.21
SMARCD3-208ENST00000472789 RAB4AP20338 218 aa7.52□□□□□ -1.21
SMARCD3-208ENST00000472789 CEMP1Q6PRD7 247 aaPredicted RBP7.52□□□□□ -1.21
SMARCD3-208ENST00000472789 ZFP2Q6ZN57 461 aa7.52□□□□□ -1.21
SMARCD3-208ENST00000472789 OR4C5Q8NGB2 326 aa7.52□□□□□ -1.21
SMARCD3-208ENST00000472789 KRTAP17-1Q9BYP8 105 aa7.52□□□□□ -1.21
SMARCD3-208ENST00000472789 KLK5Q9Y337 293 aaPredicted RBP7.52□□□□□ -1.21
SMARCD3-208ENST00000472789 TRAV10A0A0B4J240 114 aa7.51□□□□□ -1.21
SMARCD3-208ENST00000472789 MGPP08493 103 aa7.51□□□□□ -1.21
SMARCD3-208ENST00000472789 KIAA1644Q3SXP7 199 aa7.51□□□□□ -1.21
SMARCD3-208ENST00000472789 MRPL51Q4U2R6 128 aaKnown RBP7.51□□□□□ -1.21
SMARCD3-208ENST00000472789 OR10J3Q5JRS4 329 aa7.51□□□□□ -1.21
SMARCD3-208ENST00000472789 FAM74A4Q5TZK3 123 aa7.51□□□□□ -1.21
SMARCD3-208ENST00000472789 MRPL16Q9NX20 251 aaKnown RBP7.51□□□□□ -1.21
SMARCD3-208ENST00000472789 TMA7Q9Y2S6 64 aaKnown RBP7.51□□□□□ -1.21
SMARCD3-208ENST00000472789 A0A087WWL8 130 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 DEFB131BA0A096LNP1 70 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 TRAV4A0A0B4J268 109 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 PLAC8L1A1L4L8 177 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 D6R8Y8 96 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 PHOX2AO14813 284 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 RS1O15537 224 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 SRIP30626 198 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 ZNF56Q15929 161 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 PRELID3AQ96N28 172 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 ALKBH7Q9BT30 221 aaPredicted RBP7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 KIF25-AS1Q9Y6Z4 181 aa7.5□□□□□ -1.21
SMARCD3-208ENST00000472789 LCE6AA0A183 80 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 GAGE12BA1L429 117 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 IGLL5B9A064 214 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST1H2BKO60814 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 GAGE7O76087 117 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST1H2BJP06899 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 CRYGDP07320 174 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 GAGE12FP0CL80 117 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 GAGE12GP0CL81 117 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 GAGE12IP0CL82 117 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST1H2BOP23527 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST1H2BBP33778 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST1H2BDP58876 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST1H2BCP62807 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 Q0VG73 95 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST2H2BEQ16778 126 aa7.49□□□□□ -1.21
SMARCD3-208ENST00000472789 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms