RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 EPDR1Q9UM22 224 aa12.57□□□□□ -0.4
CCDC78-208ENST00000471861 TMEM262E9PQX1 116 aa12.56□□□□□ -0.4
CCDC78-208ENST00000471861 STAG3L2P0CL84 134 aa12.56□□□□□ -0.4
CCDC78-208ENST00000471861 STAG3L3P0CL85 134 aa12.56□□□□□ -0.4
CCDC78-208ENST00000471861 RPL19P84098 196 aaKnown RBP12.56□□□□□ -0.4
CCDC78-208ENST00000471861 TRBV6-8A0A0A6YYG3 113 aa12.55□□□□□ -0.4
CCDC78-208ENST00000471861 ANGP03950 147 aaKnown RBP12.55□□□□□ -0.4
CCDC78-208ENST00000471861 ARMS2P0C7Q2 107 aa12.55□□□□□ -0.4
CCDC78-208ENST00000471861 SUMO1P63165 101 aaKnown RBP12.55□□□□□ -0.4
CCDC78-208ENST00000471861 SFRP2Q96HF1 295 aa12.55□□□□□ -0.4
CCDC78-208ENST00000471861 ARL2-SNX15V9GYD0 113 aa12.55□□□□□ -0.4
CCDC78-208ENST00000471861 TRBV7-3A0A075B6L6 115 aa12.54□□□□□ -0.4
CCDC78-208ENST00000471861 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
CCDC78-208ENST00000471861 TRBV10-1A0A0K0K1A3 114 aa12.54□□□□□ -0.4
CCDC78-208ENST00000471861 B4DEV8 164 aa12.54□□□□□ -0.4
CCDC78-208ENST00000471861 GCHFRP30047 84 aa12.54□□□□□ -0.4
CCDC78-208ENST00000471861 RPL12P30050 165 aaKnown RBP12.54□□□□□ -0.4
CCDC78-208ENST00000471861 CDC34P49427 236 aaPredicted RBP12.54□□□□□ -0.4
CCDC78-208ENST00000471861 RPL36AP83881 106 aaKnown RBP12.54□□□□□ -0.4
CCDC78-208ENST00000471861 SAPCD1Q5SSQ6 148 aa12.54□□□□□ -0.4
CCDC78-208ENST00000471861 DNLZQ5SXM8 178 aa12.54□□□□□ -0.4
CCDC78-208ENST00000471861 OR11H4Q8NGC9 324 aa12.54□□□□□ -0.4
CCDC78-208ENST00000471861 RPL36ALQ969Q0 106 aaKnown RBP12.54□□□□□ -0.4
CCDC78-208ENST00000471861 CYCSP99999 105 aaKnown RBP12.53□□□□□ -0.4
CCDC78-208ENST00000471861 MIAQ16674 131 aa12.53□□□□□ -0.4
CCDC78-208ENST00000471861 CLPSL2Q6UWE3 100 aa12.53□□□□□ -0.4
CCDC78-208ENST00000471861 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.41
CCDC78-208ENST00000471861 FABP5P3A8MUU1 101 aa12.52□□□□□ -0.41
CCDC78-208ENST00000471861 KRBOX1C9JBD0 128 aa12.52□□□□□ -0.41
CCDC78-208ENST00000471861 MPC2O95563 127 aa12.52□□□□□ -0.41
CCDC78-208ENST00000471861 CHTF8P0CG12 524 aa12.52□□□□□ -0.41
CCDC78-208ENST00000471861 CRIP1P50238 77 aa12.52□□□□□ -0.41
CCDC78-208ENST00000471861 OR10G8Q8NGN5 311 aa12.52□□□□□ -0.41
CCDC78-208ENST00000471861 RAB24Q969Q5 203 aa12.52□□□□□ -0.41
CCDC78-208ENST00000471861 PRR34Q9NV39 138 aa12.52□□□□□ -0.41
CCDC78-208ENST00000471861 A0A087WYN8 130 aa12.51□□□□□ -0.41
CCDC78-208ENST00000471861 M0R036 132 aa12.51□□□□□ -0.41
CCDC78-208ENST00000471861 M0R381 172 aa12.51□□□□□ -0.41
CCDC78-208ENST00000471861 LINC01600Q96MT4 127 aa12.51□□□□□ -0.41
CCDC78-208ENST00000471861 CCDC32Q9BV29 185 aa12.51□□□□□ -0.41
CCDC78-208ENST00000471861 PTTG1O95997 202 aa12.5□□□□□ -0.41
CCDC78-208ENST00000471861 CNBPP62633 177 aaKnown RBP12.5□□□□□ -0.41
CCDC78-208ENST00000471861 Q86TA4 180 aa12.5□□□□□ -0.41
CCDC78-208ENST00000471861 SPACA4Q8TDM5 124 aa12.5□□□□□ -0.41
CCDC78-208ENST00000471861 PHOX2AO14813 284 aa12.49□□□□□ -0.41
CCDC78-208ENST00000471861 NEXN-AS1Q8NBZ9 246 aa12.49□□□□□ -0.41
CCDC78-208ENST00000471861 SLPIP03973 132 aa12.48□□□□□ -0.41
CCDC78-208ENST00000471861 NTM-AS1Q6ZSK4 140 aa12.48□□□□□ -0.41
CCDC78-208ENST00000471861 HSD17B11Q8NBQ5 300 aa12.48□□□□□ -0.41
CCDC78-208ENST00000471861 CHCHD5Q9BSY4 110 aa12.48□□□□□ -0.41
CCDC78-208ENST00000471861 PHLDA3Q9Y5J5 127 aa12.48□□□□□ -0.41
CCDC78-208ENST00000471861 SH2D1AO60880 128 aa12.47□□□□□ -0.41
CCDC78-208ENST00000471861 MZT2BQ6NZ67 158 aa12.47□□□□□ -0.41
CCDC78-208ENST00000471861 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
CCDC78-208ENST00000471861 LPAP08519 4548 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 GAS8-AS1O95177 125 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 PET100P0DJ07 73 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 RBX1P62877 108 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 PRR27Q6MZM9 219 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 CLRN3Q8NCR9 226 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 RNF185Q96GF1 192 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 TMEM167BQ9NRX6 74 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 PLAC8Q9NZF1 115 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 KIF25-AS1Q9Y6Z4 181 aa12.46□□□□□ -0.41
CCDC78-208ENST00000471861 TPT1P13693 172 aaKnown RBP12.45□□□□□ -0.42
CCDC78-208ENST00000471861 ZFP82Q8N141 532 aa12.45□□□□□ -0.42
CCDC78-208ENST00000471861 IGHV3-64A0A075B6Q5 118 aa12.44□□□□□ -0.42
CCDC78-208ENST00000471861 TMSB15BA0A087X1C1 80 aa12.44□□□□□ -0.42
CCDC78-208ENST00000471861 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
CCDC78-208ENST00000471861 hDV102S1A0JD36 115 aa12.44□□□□□ -0.42
CCDC78-208ENST00000471861 COX8CQ7Z4L0 72 aa12.44□□□□□ -0.42
CCDC78-208ENST00000471861 DPH3P1Q9H4G8 78 aa12.44□□□□□ -0.42
CCDC78-208ENST00000471861 IGLV10-54A0A075B6I4 117 aa12.43□□□□□ -0.42
CCDC78-208ENST00000471861 PEX7O00628 323 aa12.43□□□□□ -0.42
CCDC78-208ENST00000471861 CXorf1O96002 111 aa12.43□□□□□ -0.42
CCDC78-208ENST00000471861 RAB4BP61018 213 aa12.43□□□□□ -0.42
CCDC78-208ENST00000471861 LINC01559Q495D7 138 aa12.43□□□□□ -0.42
CCDC78-208ENST00000471861 ENKURQ8TC29 256 aa12.43□□□□□ -0.42
CCDC78-208ENST00000471861 A0A0J9YXV3 536 aa12.42□□□□□ -0.42
CCDC78-208ENST00000471861 KRTAP10-8P60410 259 aa12.42□□□□□ -0.42
CCDC78-208ENST00000471861 PKIAP61925 76 aa12.42□□□□□ -0.42
CCDC78-208ENST00000471861 PRR3P79522 188 aaKnown RBP12.42□□□□□ -0.42
CCDC78-208ENST00000471861 GAGE6Q13070 117 aa12.42□□□□□ -0.42
CCDC78-208ENST00000471861 ZNF56Q15929 161 aa12.42□□□□□ -0.42
CCDC78-208ENST00000471861 ATP6V0CP27449 155 aa12.41□□□□□ -0.42
CCDC78-208ENST00000471861 ZNF674Q2M3X9 581 aa12.41□□□□□ -0.42
CCDC78-208ENST00000471861 FAM162BQ5T6X4 162 aa12.41□□□□□ -0.42
CCDC78-208ENST00000471861 DPH3Q96FX2 82 aa12.41□□□□□ -0.42
CCDC78-208ENST00000471861 PSMG3Q9BT73 122 aaPredicted RBP12.41□□□□□ -0.42
CCDC78-208ENST00000471861 VAX2Q9UIW0 290 aa12.41□□□□□ -0.42
CCDC78-208ENST00000471861 INMT-MINDY4F8WBC2 141 aa12.4□□□□□ -0.42
CCDC78-208ENST00000471861 IFNA7P01567 189 aa12.4□□□□□ -0.42
CCDC78-208ENST00000471861 WDR73Q6P4I2 378 aa12.4□□□□□ -0.42
CCDC78-208ENST00000471861 C7orf33Q8WU49 177 aa12.4□□□□□ -0.42
CCDC78-208ENST00000471861 UBE2G2P60604 165 aa12.39□□□□□ -0.43
CCDC78-208ENST00000471861 REG3AQ06141 175 aa12.39□□□□□ -0.43
CCDC78-208ENST00000471861 ZNF726P1Q15940 193 aa12.39□□□□□ -0.43
CCDC78-208ENST00000471861 OR10AG1Q8NH19 301 aa12.39□□□□□ -0.43
CCDC78-208ENST00000471861 TRBV6-1A0A0K0K1D8 114 aa12.38□□□□□ -0.43
CCDC78-208ENST00000471861 C20orf203Q8NBC4 194 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms