RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 H3BQ85 93 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 IGHV4-38-2P0DP08 117 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 C17orf58Q2M2W7 97 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 SPINK6Q6UWN8 80 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 ZSWIM8A7E2V4 1837 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 SH2D6Q7Z4S9 175 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 SIGLEC8Q9NYZ4 499 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 TRAV1-1A0A0B4J248 108 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 SERTAD4-AS1Q5TG53 156 aa10.43□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 IGHV4-30-2A0A087WSY4 118 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 IGKV3D-7A0A0C4DH55 119 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 NCR3O14931 201 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 SERP2Q8N6R1 65 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 BLCAPP62952 87 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 PRR20EP86478 221 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 PRR20CP86479 221 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 PRR20DP86480 221 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 PRR20BP86481 221 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 PRR20AP86496 221 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 MLST8Q9BVC4 326 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 GFRA4Q9GZZ7 299 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 SIPA1L1O43166 1804 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 IGKV1-6A0A0C4DH72 117 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 TAX1BP3O14907 124 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 ZNF833PQ6ZTB9 187 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 LOXP28300 417 aaPredicted RBP10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 HRCT1Q6UXD1 115 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 VOPP1Q96AW1 172 aa10.42□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 Q6ZR03 302 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 C18orf32Q8TCD1 76 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 FAM110AQ9BQ89 295 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 WDR90Q96KV7 1748 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 SLC25A29Q8N8R3 303 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 TEX49A0A1B0GTD5 131 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 WT1-ASQ06250 92 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 ATP6V0E2Q8NHE4 81 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 TRBV12-3P01733 135 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 ELANEP08246 267 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 DAND5Q8N907 189 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 F8VRH5 84 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 JMJD1CQ15652 2540 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 CEND1Q8N111 149 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 PYGO2Q9BRQ0 406 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 HHLA3Q9XRX5 114 aa10.41□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 FOXI2Q6ZQN5 318 aa10.4□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 Q6ZVQ6 151 aa10.4□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 WFDC10BQ8IUB3 73 aa10.4□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 DKK2Q9UBU2 259 aa10.4□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 IGHV4-61A0A0C4DH41 118 aa10.4□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 NPYP01303 97 aa10.4□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 OPRPNQ99935 248 aaPredicted RBP10.4□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 KLK12Q9UKR0 248 aa10.4□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 HIGD2AQ9BW72 106 aa10.4□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 NCOR1P1Q9H4R4 102 aa10.4□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 LYPD6BQ8NI32 183 aa10.4□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 RPL39LQ96EH5 51 aaKnown RBP10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 FHL1Q13642 323 aa10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 ZNF492Q9P255 531 aa10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 IGHV2-5P01817 119 aa10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 NDUFA1O15239 70 aa10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 UBE2D2P62837 147 aa10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 FAM231DQ6ZW35 169 aa10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 PPDPFLQ8WWR9 84 aa10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 SS18L2Q9UHA2 77 aa10.39□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 FNDC10F2Z333 226 aa10.38□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 H3BRN7 92 aa10.38□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 LINC01620Q4KN68 170 aa10.38□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 TRBV6-6A0A0A6YYG2 114 aa10.38□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 IGLC2P0DOY2 106 aa10.38□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 IGLC3P0DOY3 106 aa10.38□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 UPK3BQ9BT76 320 aa10.38□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 LY96Q9Y6Y9 160 aa10.38□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 ATP5G1P05496 136 aa10.37□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 Q8N9W7 124 aa10.37□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 SMAD5-AS1Q9Y6J3 95 aa10.37□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 FOXI1Q12951 378 aa10.37□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 IGKV1D-37A0A075B6S9 117 aa10.37□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 CSRP3P50461 194 aa10.37□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 LRP4O75096 1905 aa10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 ZNF503-AS2A6NEH8 195 aa10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 C9orf118A6NHY6 69 aa10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 TMEM190Q8WZ59 177 aa10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 SND1-IT1Q9HBX3 110 aa10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 WISP1O95388 367 aa10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 C17orf82Q86X59 251 aaPredicted RBP10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 NUP210Q8TEM1 1887 aaPredicted RBP10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 C16orf74Q96GX8 76 aa10.36□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 LY6G6CO95867 125 aa10.35□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 K7EM74 188 aa10.35□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 NTN5Q8WTR8 489 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 POLR3KQ9Y2Y1 108 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 QRFPP83859 136 aa10.35□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 K7EQD1 137 aa10.35□□□□□ -0.75
NPHP3-ACAD11-201ENST00000471702 DIRC1Q969H9 104 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms