RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 SFRP2Q96HF1 295 aa20.84■□□□□ 0.93
HMG20B-209ENST00000470356 TMEM70Q9BUB7 260 aa20.84■□□□□ 0.93
HMG20B-209ENST00000470356 DMBT1Q9UGM3 2413 aaPredicted RBP20.83■□□□□ 0.93
HMG20B-209ENST00000470356 TRAV8-3A0A0A6YYJ7 113 aa20.83■□□□□ 0.93
HMG20B-209ENST00000470356 SMLR1H3BR10 107 aa20.82■□□□□ 0.92
HMG20B-209ENST00000470356 INAFM2P0DMQ5 153 aa20.82■□□□□ 0.92
HMG20B-209ENST00000470356 TPT1P13693 172 aaKnown RBP20.82■□□□□ 0.92
HMG20B-209ENST00000470356 FAM74A4Q5TZK3 123 aa20.82■□□□□ 0.92
HMG20B-209ENST00000470356 TOR2AQ5JU69 321 aa20.81■□□□□ 0.92
HMG20B-209ENST00000470356 DAZ4Q86SG3 579 aaKnown RBP20.81■□□□□ 0.92
HMG20B-209ENST00000470356 KCNRGQ8N5I3 272 aa20.81■□□□□ 0.92
HMG20B-209ENST00000470356 DAZ3Q9NR90 486 aaKnown RBP20.81■□□□□ 0.92
HMG20B-209ENST00000470356 SRRM2Q9UQ35 2752 aaKnown RBP20.81■□□□□ 0.92
HMG20B-209ENST00000470356 VPS13BQ7Z7G8 4022 aa20.8■□□□□ 0.92
HMG20B-209ENST00000470356 A0A087WWL8 130 aa20.8■□□□□ 0.92
HMG20B-209ENST00000470356 TMSB15BA0A087X1C1 80 aa20.8■□□□□ 0.92
HMG20B-209ENST00000470356 PAGE4O60829 102 aa20.8■□□□□ 0.92
HMG20B-209ENST00000470356 AKR1C3P42330 323 aa20.8■□□□□ 0.92
HMG20B-209ENST00000470356 ZNF345Q14585 488 aa20.8■□□□□ 0.92
HMG20B-209ENST00000470356 M0R381 172 aa20.79■□□□□ 0.92
HMG20B-209ENST00000470356 SMR3BP02814 79 aaPredicted RBP20.79■□□□□ 0.92
HMG20B-209ENST00000470356 SEC11BP0C7V7 166 aa20.79■□□□□ 0.92
HMG20B-209ENST00000470356 ZFP82Q8N141 532 aa20.79■□□□□ 0.92
HMG20B-209ENST00000470356 MBD3L1Q8WWY6 194 aa20.79■□□□□ 0.92
HMG20B-209ENST00000470356 SFT2D1Q8WV19 159 aa20.78■□□□□ 0.92
HMG20B-209ENST00000470356 FLG2Q5D862 2391 aaPredicted RBP20.78■□□□□ 0.92
HMG20B-209ENST00000470356 UMAD1C9J7I0 102 aa20.77■□□□□ 0.92
HMG20B-209ENST00000470356 S100A9P06702 114 aaKnown RBP20.77■□□□□ 0.92
HMG20B-209ENST00000470356 WFDC2Q14508 124 aa20.76■□□□□ 0.91
HMG20B-209ENST00000470356 HAMPP81172 84 aa20.75■□□□□ 0.91
HMG20B-209ENST00000470356 NIT1Q86X76 327 aa20.75■□□□□ 0.91
HMG20B-209ENST00000470356 FAM213BQ8TBF2 198 aa20.75■□□□□ 0.91
HMG20B-209ENST00000470356 URGCP-MRPS24S4R325 110 aa20.75■□□□□ 0.91
HMG20B-209ENST00000470356 TRBV10-1A0A0K0K1A3 114 aa20.74■□□□□ 0.91
HMG20B-209ENST00000470356 HMSDA8MTL9 139 aa20.74■□□□□ 0.91
HMG20B-209ENST00000470356 C1QBP02746 253 aa20.74■□□□□ 0.91
HMG20B-209ENST00000470356 COX11Q9Y6N1 276 aa20.74■□□□□ 0.91
HMG20B-209ENST00000470356 FAM229AH3BQW9 127 aa20.73■□□□□ 0.91
HMG20B-209ENST00000470356 A0A0D9SG52 128 aa20.72■□□□□ 0.91
HMG20B-209ENST00000470356 RPL36AP83881 106 aaKnown RBP20.71■□□□□ 0.91
HMG20B-209ENST00000470356 RPL36ALQ969Q0 106 aaKnown RBP20.71■□□□□ 0.91
HMG20B-209ENST00000470356 MLST8Q9BVC4 326 aa20.71■□□□□ 0.91
HMG20B-209ENST00000470356 FAM30AQ9NZY2 134 aa20.71■□□□□ 0.91
HMG20B-209ENST00000470356 TRBV7-3A0A075B6L6 115 aa20.7■□□□□ 0.9
HMG20B-209ENST00000470356 A0A1B0GV50 99 aa20.7■□□□□ 0.9
HMG20B-209ENST00000470356 RMI2Q96E14 147 aa20.7■□□□□ 0.9
HMG20B-209ENST00000470356 ZNF471Q9BX82 626 aaPredicted RBP20.7■□□□□ 0.9
HMG20B-209ENST00000470356 SCO2A0A1W2PP80 73 aa20.69■□□□□ 0.9
HMG20B-209ENST00000470356 LECT2O14960 151 aa20.69■□□□□ 0.9
HMG20B-209ENST00000470356 PFDN1O60925 122 aa20.69■□□□□ 0.9
HMG20B-209ENST00000470356 CXCL1P09341 107 aa20.69■□□□□ 0.9
HMG20B-209ENST00000470356 UBE2D3P61077 147 aa20.69■□□□□ 0.9
HMG20B-209ENST00000470356 UBE2D2P62837 147 aa20.69■□□□□ 0.9
HMG20B-209ENST00000470356 BAGE2Q86Y30 109 aa20.69■□□□□ 0.9
HMG20B-209ENST00000470356 KANTRA0A1W2PQU2 76 aa20.68■□□□□ 0.9
HMG20B-209ENST00000470356 BCL2L11O43521 198 aa20.68■□□□□ 0.9
HMG20B-209ENST00000470356 OR10G8Q8NGN5 311 aa20.68■□□□□ 0.9
HMG20B-209ENST00000470356 CHCHD7Q9BUK0 85 aa20.68■□□□□ 0.9
HMG20B-209ENST00000470356 DNAH8Q96JB1 4490 aa20.67■□□□□ 0.9
HMG20B-209ENST00000470356 H2AFB1P0C5Y9 115 aa20.67■□□□□ 0.9
HMG20B-209ENST00000470356 RAB4BP61018 213 aa20.67■□□□□ 0.9
HMG20B-209ENST00000470356 RPL19P84098 196 aaKnown RBP20.67■□□□□ 0.9
HMG20B-209ENST00000470356 BAALCQ8WXS3 180 aa20.67■□□□□ 0.9
HMG20B-209ENST00000470356 KLK12Q9UKR0 248 aa20.67■□□□□ 0.9
HMG20B-209ENST00000470356 HERC1Q15751 4861 aa20.66■□□□□ 0.9
HMG20B-209ENST00000470356 A0A087WX48 190 aa20.66■□□□□ 0.9
HMG20B-209ENST00000470356 OR10AG1Q8NH19 301 aa20.66■□□□□ 0.9
HMG20B-209ENST00000470356 EIF5AP63241 154 aaKnown RBP20.65■□□□□ 0.9
HMG20B-209ENST00000470356 ELOBQ15370 118 aa20.65■□□□□ 0.9
HMG20B-209ENST00000470356 DNAJC30Q96LL9 226 aa20.65■□□□□ 0.9
HMG20B-209ENST00000470356 SSBP4Q9BWG4 385 aaPredicted RBP20.65■□□□□ 0.9
HMG20B-209ENST00000470356 TMUB2Q71RG4 321 aa20.64■□□□□ 0.89
HMG20B-209ENST00000470356 SNAI2O43623 268 aa20.63■□□□□ 0.89
HMG20B-209ENST00000470356 PRR27Q6MZM9 219 aa20.63■□□□□ 0.89
HMG20B-209ENST00000470356 Q6ZSA8 131 aa20.63■□□□□ 0.89
HMG20B-209ENST00000470356 IGLV2-33A0A075B6J2 118 aaPredicted RBP20.62■□□□□ 0.89
HMG20B-209ENST00000470356 IGKV2D-24A0A075B6R9 120 aa20.62■□□□□ 0.89
HMG20B-209ENST00000470356 OR5AL1P0C617 328 aa20.62■□□□□ 0.89
HMG20B-209ENST00000470356 KCNIP4Q6PIL6 250 aa20.62■□□□□ 0.89
HMG20B-209ENST00000470356 Q8N976 141 aa20.62■□□□□ 0.89
HMG20B-209ENST00000470356 ZNF56Q15929 161 aa20.61■□□□□ 0.89
HMG20B-209ENST00000470356 UBE2WQ96B02 151 aa20.61■□□□□ 0.89
HMG20B-209ENST00000470356 TRBV6-8A0A0A6YYG3 113 aa20.6■□□□□ 0.89
HMG20B-209ENST00000470356 ATRAIDQ6UW56 229 aa20.6■□□□□ 0.89
HMG20B-209ENST00000470356 NEXN-AS1Q8NBZ9 246 aa20.6■□□□□ 0.89
HMG20B-209ENST00000470356 MYCBP2O75592 4640 aa20.6■□□□□ 0.89
HMG20B-209ENST00000470356 SPANXN1Q5VSR9 72 aa20.59■□□□□ 0.89
HMG20B-209ENST00000470356 RPL35P42766 123 aaKnown RBP20.58■□□□□ 0.89
HMG20B-209ENST00000470356 MUC21A0A0G2JKD1 596 aa20.57■□□□□ 0.88
HMG20B-209ENST00000470356 MUC21A0A140T8X8 626 aa20.57■□□□□ 0.88
HMG20B-209ENST00000470356 Q0VG73 95 aa20.57■□□□□ 0.88
HMG20B-209ENST00000470356 TMEM262E9PQX1 116 aa20.56■□□□□ 0.88
HMG20B-209ENST00000470356 CCL20P78556 96 aa20.56■□□□□ 0.88
HMG20B-209ENST00000470356 MANBALQ9NQG1 85 aa20.56■□□□□ 0.88
HMG20B-209ENST00000470356 TRAV1-1A0A0B4J248 108 aa20.55■□□□□ 0.88
HMG20B-209ENST00000470356 RBFOX3A6NFN3 312 aa20.55■□□□□ 0.88
HMG20B-209ENST00000470356 C11orf52Q96A22 123 aa20.55■□□□□ 0.88
HMG20B-209ENST00000470356 F5H697 171 aa20.54■□□□□ 0.88
HMG20B-209ENST00000470356 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.54■□□□□ 0.88
HMG20B-209ENST00000470356 DERL1Q9BUN8 251 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms