RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 K7EP13 123 aa5.96□□□□□ -1.46
SMC4-212ENST00000470240 DEFB1P60022 68 aa5.96□□□□□ -1.46
SMC4-212ENST00000470240 FAM74A4Q5TZK3 123 aa5.96□□□□□ -1.46
SMC4-212ENST00000470240 Q6ZQT7 251 aa5.96□□□□□ -1.46
SMC4-212ENST00000470240 HIST1H4GQ99525 98 aa5.96□□□□□ -1.46
SMC4-212ENST00000470240 TIMM17AQ99595 171 aa5.96□□□□□ -1.46
SMC4-212ENST00000470240 MYMXA0A1B0GTQ4 84 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 H3BUT2 72 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 ZNF561-AS1K7EIQ3 104 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 K7ERU9 68 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 IGKV3-20P01619 116 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 ZNF415Q09FC8 603 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 SPINK13Q1W4C9 94 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 TCTEX1D4Q5JR98 221 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 SUMO4Q6EEV6 95 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 Q6ZVH6 145 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 CEND1Q8N111 149 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 NEXN-AS1Q8NBZ9 246 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 NBEAQ8NFP9 2946 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 C4orf3Q8WVX3 66 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 BAALCQ8WXS3 180 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 RAX2Q96IS3 184 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 TP53TG1Q9Y2A0 90 aa5.95□□□□□ -1.46
SMC4-212ENST00000470240 CFAP47Q6ZTR5 3102 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.94□□□□□ -1.461e-8■■■■■ 101.8
SMC4-212ENST00000470240 A0A087WWL8 130 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 IGKV2D-26A0A0A0MRZ7 120 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 SDHAF1A6NFY7 115 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 E9PLD3 99 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 K7EP34 96 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 RIPPLY3P57055 190 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 PMVKQ15126 192 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 NSUN5P1Q3KNT7 163 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 SCGB1D4Q6XE38 83 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 ZFP2Q6ZN57 461 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 Q8N2B8 174 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 ZNF843Q8N446 348 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 RAB37Q96AX2 223 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 Q96MF0 132 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 SPCS1Q9Y6A9 102 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 KIF25-AS1Q9Y6Z4 181 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 AKAP6Q13023 2319 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 ATMQ13315 3056 aa5.94□□□□□ -1.46
SMC4-212ENST00000470240 TRAV12-2A0A075B6T6 113 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 TRBV27A0A0K0K1C4 114 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 A0A1W2PPM0 123 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 PRSS29PA6NIE9 313 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 A8MWV9 139 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 RHODO00212 210 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 PRB1P04280 392 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 EDN2P20800 178 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 POLR2KP53803 58 aaKnown RBP5.93□□□□□ -1.46
SMC4-212ENST00000470240 ZNF876PQ49A33 203 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 PIK3CD-AS1Q5SR53 167 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 LYRM7Q5U5X0 104 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 C10orf99Q6UWK7 81 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 MAPK1IP1LQ8NDC0 245 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 TM2D2Q9BX73 214 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 NHP2Q9NX24 153 aaKnown RBP5.93□□□□□ -1.46
SMC4-212ENST00000470240 SELENOKQ9Y6D0 94 aa5.93□□□□□ -1.46
SMC4-212ENST00000470240 SPENQ96T58 3664 aaKnown RBP5.92□□□□□ -1.46
SMC4-212ENST00000470240 GAGE12BA1L429 117 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 ZNF815PA8K554 130 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 I3L3M4 83 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 SPRY2O43597 315 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 INSP01308 110 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 LINC00315P59091 139 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 DEFB131AP59861 70 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 KLHL30-AS1Q8NEE0 82 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 DUX3Q96PT4 197 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 PRADC1Q9BSG0 188 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 CST9LQ9H4G1 147 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 ZNF256Q9Y2P7 627 aaPredicted RBP5.92□□□□□ -1.46
SMC4-212ENST00000470240 DMXL2Q8TDJ6 3036 aa5.92□□□□□ -1.46
SMC4-212ENST00000470240 SPTBN4Q9H254 2564 aa5.91□□□□□ -1.46
SMC4-212ENST00000470240 TRAV25A0A0B4J276 109 aa5.91□□□□□ -1.46
SMC4-212ENST00000470240 M0R2P5 195 aa5.91□□□□□ -1.46
SMC4-212ENST00000470240 LGALS3P17931 250 aaKnown RBP5.91□□□□□ -1.46
SMC4-212ENST00000470240 FXYD2P54710 66 aa5.91□□□□□ -1.46
SMC4-212ENST00000470240 CMC4P56277 68 aaPredicted RBP5.91□□□□□ -1.46
SMC4-212ENST00000470240 SRSF9Q13242 221 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMC4-212ENST00000470240 SPAG8Q99932 426 aaPredicted RBP5.91□□□□□ -1.46
SMC4-212ENST00000470240 EDA2RQ9HAV5 297 aa5.91□□□□□ -1.46
SMC4-212ENST00000470240 MDFICQ9P1T7 246 aa5.91□□□□□ -1.46
SMC4-212ENST00000470240 TNFRSF18Q9Y5U5 241 aa5.91□□□□□ -1.46
SMC4-212ENST00000470240 ADGRG4Q8IZF6 3080 aa5.91□□□□□ -1.46
SMC4-212ENST00000470240 HRNRQ86YZ3 2850 aaPredicted RBP5.91□□□□□ -1.46
SMC4-212ENST00000470240 NCOR2Q9Y618 2525 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 IGIPA6NJ69 53 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 C11orf86A6NJI1 115 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 KNCNA6PVL3 124 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 A8MTW9 85 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 H3BMM0 161 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 M0QY20 66 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 CRYGDP07320 174 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 HTN1P15515 57 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 RNF151Q2KHN1 245 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 TMEM170BQ5T4T1 132 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 AMTNQ6UX39 209 aa5.9□□□□□ -1.46
SMC4-212ENST00000470240 NEGR1Q7Z3B1 354 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms