RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 SH2D1AO60880 128 aa11.58□□□□□ -0.56
COL7A1-208ENST00000470076 FAM162BQ5T6X4 162 aa11.58□□□□□ -0.56
COL7A1-208ENST00000470076 FMC1Q96HJ9 113 aa11.58□□□□□ -0.56
COL7A1-208ENST00000470076 SEC11BP0C7V7 166 aa11.57□□□□□ -0.56
COL7A1-208ENST00000470076 UBE2G1P62253 170 aa11.57□□□□□ -0.56
COL7A1-208ENST00000470076 FAM74A4Q5TZK3 123 aa11.57□□□□□ -0.56
COL7A1-208ENST00000470076 TCEAL7Q9BRU2 100 aa11.57□□□□□ -0.56
COL7A1-208ENST00000470076 PHLDA3Q9Y5J5 127 aa11.57□□□□□ -0.56
COL7A1-208ENST00000470076 URGCP-MRPS24S4R325 110 aa11.57□□□□□ -0.56
COL7A1-208ENST00000470076 GRIFINA4D1Z8 144 aa11.56□□□□□ -0.56
COL7A1-208ENST00000470076 MAP1LC3B2A6NCE7 125 aa11.56□□□□□ -0.56
COL7A1-208ENST00000470076 TPT1P13693 172 aaKnown RBP11.56□□□□□ -0.56
COL7A1-208ENST00000470076 Q6ZSA8 131 aa11.56□□□□□ -0.56
COL7A1-208ENST00000470076 RMI2Q96E14 147 aa11.56□□□□□ -0.56
COL7A1-208ENST00000470076 SFRP2Q96HF1 295 aa11.56□□□□□ -0.56
COL7A1-208ENST00000470076 MAP1LC3BQ9GZQ8 125 aa11.56□□□□□ -0.56
COL7A1-208ENST00000470076 TRBV6-1A0A0K0K1D8 114 aa11.55□□□□□ -0.56
COL7A1-208ENST00000470076 LECT2O14960 151 aa11.55□□□□□ -0.56
COL7A1-208ENST00000470076 FHITP49789 147 aa11.55□□□□□ -0.56
COL7A1-208ENST00000470076 ZNF674Q2M3X9 581 aa11.55□□□□□ -0.56
COL7A1-208ENST00000470076 LINC01559Q495D7 138 aa11.55□□□□□ -0.56
COL7A1-208ENST00000470076 NIT1Q86X76 327 aa11.55□□□□□ -0.56
COL7A1-208ENST00000470076 A0A087WWL8 130 aa11.54□□□□□ -0.56
COL7A1-208ENST00000470076 ZFP82Q8N141 532 aa11.54□□□□□ -0.56
COL7A1-208ENST00000470076 STOML3Q8TAV4 291 aa11.54□□□□□ -0.56
COL7A1-208ENST00000470076 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.53□□□□□ -0.56
COL7A1-208ENST00000470076 TRBV10-1A0A0K0K1A3 114 aa11.53□□□□□ -0.56
COL7A1-208ENST00000470076 M0R381 172 aa11.53□□□□□ -0.56
COL7A1-208ENST00000470076 LTAP01374 205 aa11.53□□□□□ -0.56
COL7A1-208ENST00000470076 CST9LP1Q5W188 147 aa11.53□□□□□ -0.56
COL7A1-208ENST00000470076 BAALCQ8WXS3 180 aa11.53□□□□□ -0.56
COL7A1-208ENST00000470076 CHCHD7Q9BUK0 85 aa11.53□□□□□ -0.56
COL7A1-208ENST00000470076 A0A087WX48 190 aa11.52□□□□□ -0.57
COL7A1-208ENST00000470076 TMSB15BA0A087X1C1 80 aa11.52□□□□□ -0.57
COL7A1-208ENST00000470076 G3V3Q6 166 aa11.52□□□□□ -0.57
COL7A1-208ENST00000470076 ARPC5O15511 151 aa11.52□□□□□ -0.57
COL7A1-208ENST00000470076 PLA2G1BP04054 148 aaKnown RBP11.52□□□□□ -0.57
COL7A1-208ENST00000470076 RPL36AP83881 106 aaKnown RBP11.52□□□□□ -0.57
COL7A1-208ENST00000470076 ELOBQ15370 118 aa11.52□□□□□ -0.57
COL7A1-208ENST00000470076 Q8N976 141 aa11.52□□□□□ -0.57
COL7A1-208ENST00000470076 RPL36ALQ969Q0 106 aaKnown RBP11.52□□□□□ -0.57
COL7A1-208ENST00000470076 CYTL1Q9NRR1 136 aa11.52□□□□□ -0.57
COL7A1-208ENST00000470076 KLK12Q9UKR0 248 aa11.52□□□□□ -0.57
COL7A1-208ENST00000470076 IGKV2D-24A0A075B6R9 120 aa11.51□□□□□ -0.57
COL7A1-208ENST00000470076 AKR1C3P42330 323 aa11.51□□□□□ -0.57
COL7A1-208ENST00000470076 KCNIP4Q6PIL6 250 aa11.51□□□□□ -0.57
COL7A1-208ENST00000470076 TRBV7-3A0A075B6L6 115 aa11.5□□□□□ -0.57
COL7A1-208ENST00000470076 UBE2D3P61077 147 aa11.5□□□□□ -0.57
COL7A1-208ENST00000470076 UBE2D2P62837 147 aa11.5□□□□□ -0.57
COL7A1-208ENST00000470076 UBE2WQ96B02 151 aa11.5□□□□□ -0.57
COL7A1-208ENST00000470076 RBFOX3A6NFN3 312 aa11.49□□□□□ -0.57
COL7A1-208ENST00000470076 S100A9P06702 114 aaKnown RBP11.49□□□□□ -0.57
COL7A1-208ENST00000470076 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
COL7A1-208ENST00000470076 DNAJC30Q96LL9 226 aa11.49□□□□□ -0.57
COL7A1-208ENST00000470076 PAGE4O60829 102 aa11.48□□□□□ -0.57
COL7A1-208ENST00000470076 ATRAIDQ6UW56 229 aa11.48□□□□□ -0.57
COL7A1-208ENST00000470076 OR10G8Q8NGN5 311 aa11.48□□□□□ -0.57
COL7A1-208ENST00000470076 J3QL48 77 aa11.47□□□□□ -0.57
COL7A1-208ENST00000470076 CXCL1P09341 107 aa11.47□□□□□ -0.57
COL7A1-208ENST00000470076 RAB4BP61018 213 aa11.47□□□□□ -0.57
COL7A1-208ENST00000470076 Q0VG73 95 aa11.47□□□□□ -0.57
COL7A1-208ENST00000470076 TRBV6-8A0A0A6YYG3 113 aa11.46□□□□□ -0.57
COL7A1-208ENST00000470076 RGS21Q2M5E4 152 aa11.46□□□□□ -0.57
COL7A1-208ENST00000470076 LINC01620Q4KN68 170 aa11.46□□□□□ -0.57
COL7A1-208ENST00000470076 SFT2D1Q8WV19 159 aa11.46□□□□□ -0.57
COL7A1-208ENST00000470076 MBD3L1Q8WWY6 194 aa11.46□□□□□ -0.57
COL7A1-208ENST00000470076 UMAD1C9J7I0 102 aa11.45□□□□□ -0.58
COL7A1-208ENST00000470076 ZNF345Q14585 488 aa11.45□□□□□ -0.58
COL7A1-208ENST00000470076 ZNF56Q15929 161 aa11.45□□□□□ -0.58
COL7A1-208ENST00000470076 SCXQ7RTU7 201 aa11.45□□□□□ -0.58
COL7A1-208ENST00000470076 KCNRGQ8N5I3 272 aa11.45□□□□□ -0.58
COL7A1-208ENST00000470076 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.45□□□□□ -0.58
COL7A1-208ENST00000470076 OR10AG1Q8NH19 301 aa11.45□□□□□ -0.58
COL7A1-208ENST00000470076 MLST8Q9BVC4 326 aa11.45□□□□□ -0.58
COL7A1-208ENST00000470076 ZNF471Q9BX82 626 aaPredicted RBP11.45□□□□□ -0.58
COL7A1-208ENST00000470076 TMEM262E9PQX1 116 aa11.44□□□□□ -0.58
COL7A1-208ENST00000470076 PFDN1O60925 122 aa11.44□□□□□ -0.58
COL7A1-208ENST00000470076 RPL19P84098 196 aaKnown RBP11.44□□□□□ -0.58
COL7A1-208ENST00000470076 C14orf177Q52M58 125 aa11.44□□□□□ -0.58
COL7A1-208ENST00000470076 PRR27Q6MZM9 219 aa11.44□□□□□ -0.58
COL7A1-208ENST00000470076 NEXN-AS1Q8NBZ9 246 aa11.44□□□□□ -0.58
COL7A1-208ENST00000470076 FAM213BQ8TBF2 198 aa11.44□□□□□ -0.58
COL7A1-208ENST00000470076 DEFB104AQ8WTQ1 72 aa11.44□□□□□ -0.58
COL7A1-208ENST00000470076 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
COL7A1-208ENST00000470076 SSBP4Q9BWG4 385 aaPredicted RBP11.44□□□□□ -0.58
COL7A1-208ENST00000470076 C1orf43Q9BWL3 253 aa11.44□□□□□ -0.58
COL7A1-208ENST00000470076 SCO2A0A1W2PP80 73 aa11.43□□□□□ -0.58
COL7A1-208ENST00000470076 SNAI2O43623 268 aa11.43□□□□□ -0.58
COL7A1-208ENST00000470076 CRPP02741 224 aa11.43□□□□□ -0.58
COL7A1-208ENST00000470076 BAGE2Q86Y30 109 aa11.43□□□□□ -0.58
COL7A1-208ENST00000470076 SMLR1H3BR10 107 aa11.42□□□□□ -0.58
COL7A1-208ENST00000470076 OR5AL1P0C617 328 aa11.42□□□□□ -0.58
COL7A1-208ENST00000470076 PKIAP61925 76 aa11.42□□□□□ -0.58
COL7A1-208ENST00000470076 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
COL7A1-208ENST00000470076 ENHOQ6UWT2 76 aa11.42□□□□□ -0.58
COL7A1-208ENST00000470076 A0A1B0GV50 99 aa11.41□□□□□ -0.58
COL7A1-208ENST00000470076 KRTAP29-1A8MX34 341 aaPredicted RBP11.41□□□□□ -0.58
COL7A1-208ENST00000470076 MPV17L2Q567V2 206 aa11.41□□□□□ -0.58
COL7A1-208ENST00000470076 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
COL7A1-208ENST00000470076 C15orf54Q8N8G6 183 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms