RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 ITPR2Q14571 2701 aa13.32□□□□□ -0.28
MCF2L-221ENST00000469415 H3BUA1 57 aa13.32□□□□□ -0.28
MCF2L-221ENST00000469415 LENEPQ9Y5L5 61 aa13.32□□□□□ -0.28
MCF2L-221ENST00000469415 HSD52Q0P140 79 aa13.31□□□□□ -0.28
MCF2L-221ENST00000469415 GTSF1LQ9H1H1 148 aa13.31□□□□□ -0.28
MCF2L-221ENST00000469415 A6NDN8 102 aa13.31□□□□□ -0.28
MCF2L-221ENST00000469415 SMAGPQ0VAQ4 97 aa13.31□□□□□ -0.28
MCF2L-221ENST00000469415 MRAP2Q96G30 205 aa13.31□□□□□ -0.28
MCF2L-221ENST00000469415 SNRPD3P62318 126 aaKnown RBP13.31□□□□□ -0.28
MCF2L-221ENST00000469415 CD300EQ496F6 205 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-221ENST00000469415 Q8N1Y9 231 aa13.31□□□□□ -0.28
MCF2L-221ENST00000469415 CHTOPQ9Y3Y2 248 aaKnown RBP13.31□□□□□ -0.28
MCF2L-221ENST00000469415 SFTA2Q6UW10 78 aa13.3□□□□□ -0.28
MCF2L-221ENST00000469415 UBR5O95071 2799 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-221ENST00000469415 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
MCF2L-221ENST00000469415 A0A1W2PRX2 142 aa13.3□□□□□ -0.28
MCF2L-221ENST00000469415 SLC25A16P16260 332 aa13.3□□□□□ -0.28
MCF2L-221ENST00000469415 OR9G4Q8NGQ1 327 aa13.3□□□□□ -0.28
MCF2L-221ENST00000469415 OPRPNQ99935 248 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-221ENST00000469415 A0A087WX48 190 aa13.29□□□□□ -0.28
MCF2L-221ENST00000469415 TCTEX1D4Q5JR98 221 aa13.29□□□□□ -0.28
MCF2L-221ENST00000469415 SUMO4Q6EEV6 95 aa13.29□□□□□ -0.28
MCF2L-221ENST00000469415 K7ERU9 68 aa13.29□□□□□ -0.28
MCF2L-221ENST00000469415 SEC11AP67812 179 aa13.29□□□□□ -0.28
MCF2L-221ENST00000469415 Q96MF0 132 aa13.29□□□□□ -0.28
MCF2L-221ENST00000469415 SCGB2A2Q13296 93 aa13.29□□□□□ -0.28
MCF2L-221ENST00000469415 VPREB3Q9UKI3 123 aa13.29□□□□□ -0.28
MCF2L-221ENST00000469415 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
MCF2L-221ENST00000469415 FN1P02751 2386 aaKnown RBP13.28□□□□□ -0.28
MCF2L-221ENST00000469415 HELZ2Q9BYK8 2649 aaKnown RBP13.28□□□□□ -0.28
MCF2L-221ENST00000469415 PRSS29PA6NIE9 313 aa13.28□□□□□ -0.28
MCF2L-221ENST00000469415 KLHL30-AS1Q8NEE0 82 aa13.28□□□□□ -0.28
MCF2L-221ENST00000469415 ATP6V0BQ99437 205 aa13.28□□□□□ -0.28
MCF2L-221ENST00000469415 DEFB131AP59861 70 aa13.28□□□□□ -0.28
MCF2L-221ENST00000469415 HIVEP2P31629 2446 aa13.27□□□□□ -0.28
MCF2L-221ENST00000469415 KLLNB2CW77 178 aa13.27□□□□□ -0.29
MCF2L-221ENST00000469415 ORMDL2Q53FV1 153 aa13.27□□□□□ -0.29
MCF2L-221ENST00000469415 FAM19A4Q96LR4 140 aa13.27□□□□□ -0.29
MCF2L-221ENST00000469415 HIST1H4GQ99525 98 aa13.27□□□□□ -0.29
MCF2L-221ENST00000469415 ZMAT4Q9H898 229 aa13.27□□□□□ -0.29
MCF2L-221ENST00000469415 CYSLTR1Q9Y271 337 aa13.27□□□□□ -0.29
MCF2L-221ENST00000469415 SDHAF1A6NFY7 115 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 IGHV4-31P0DP07 118 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 MTURNQ8N3F0 131 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 A0A0J9YX75 114 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 ZNF876PQ49A33 203 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 BAALCQ8WXS3 180 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 IGHV3-64A0A075B6Q5 118 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 H7C1H1 209 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 P0DMU3 169 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 FAM231AP0DMU4 169 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 FAM231CP0DMU5 169 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 PROK1P58294 105 aa13.26□□□□□ -0.29
MCF2L-221ENST00000469415 HECTD1Q9ULT8 2610 aa13.25□□□□□ -0.29
MCF2L-221ENST00000469415 F8VRH5 84 aa13.25□□□□□ -0.29
MCF2L-221ENST00000469415 GATA3P23771 443 aa13.25□□□□□ -0.29
MCF2L-221ENST00000469415 OR11H1Q8NG94 326 aa13.25□□□□□ -0.29
MCF2L-221ENST00000469415 ZNF702PQ9H963 129 aa13.25□□□□□ -0.29
MCF2L-221ENST00000469415 A0A096LNT2 108 aa13.25□□□□□ -0.29
MCF2L-221ENST00000469415 DSCR9P59020 149 aa13.25□□□□□ -0.29
MCF2L-221ENST00000469415 APRG1Q8IVJ8 170 aa13.25□□□□□ -0.29
MCF2L-221ENST00000469415 ZNF843Q8N446 348 aa13.25□□□□□ -0.29
MCF2L-221ENST00000469415 C9orf118A6NHY6 69 aa13.24□□□□□ -0.29
MCF2L-221ENST00000469415 OR11H12B2RN74 326 aa13.24□□□□□ -0.29
MCF2L-221ENST00000469415 K7EMT4 169 aa13.24□□□□□ -0.29
MCF2L-221ENST00000469415 LINC00315P59091 139 aa13.24□□□□□ -0.29
MCF2L-221ENST00000469415 RPL24P83731 157 aaKnown RBP13.24□□□□□ -0.29
MCF2L-221ENST00000469415 OR11H2Q8NH07 326 aa13.24□□□□□ -0.29
MCF2L-221ENST00000469415 IGHV3OR16-12A0A075B7B8 117 aa13.24□□□□□ -0.29
MCF2L-221ENST00000469415 LINC01546A6NGU7 62 aa13.24□□□□□ -0.29
MCF2L-221ENST00000469415 SPCS1Q9Y6A9 102 aa13.24□□□□□ -0.29
MCF2L-221ENST00000469415 K7EQG2 157 aa13.23□□□□□ -0.29
MCF2L-221ENST00000469415 LGALS1P09382 135 aaKnown RBP13.23□□□□□ -0.29
MCF2L-221ENST00000469415 TOMM6Q96B49 74 aa13.23□□□□□ -0.29
MCF2L-221ENST00000469415 FASNP49327 2511 aaKnown RBP13.23□□□□□ -0.29
MCF2L-221ENST00000469415 SMIM13P0DJ93 91 aa13.23□□□□□ -0.29
MCF2L-221ENST00000469415 SCGB1D4Q6XE38 83 aa13.23□□□□□ -0.29
MCF2L-221ENST00000469415 H3BRM9 83 aa13.23□□□□□ -0.29
MCF2L-221ENST00000469415 SVIPQ8NHG7 77 aa13.23□□□□□ -0.29
MCF2L-221ENST00000469415 TMEM170BQ5T4T1 132 aa13.22□□□□□ -0.29
MCF2L-221ENST00000469415 KIR2DL4Q99706 377 aa13.22□□□□□ -0.29
MCF2L-221ENST00000469415 C20orf78Q9BR46 151 aa13.22□□□□□ -0.29
MCF2L-221ENST00000469415 Q9UF83 564 aa13.22□□□□□ -0.29
MCF2L-221ENST00000469415 KIF25-AS1Q9Y6Z4 181 aa13.22□□□□□ -0.29
MCF2L-221ENST00000469415 IGHV3-16A0A0C4DH30 117 aa13.22□□□□□ -0.29
MCF2L-221ENST00000469415 ZFP2Q6ZN57 461 aa13.22□□□□□ -0.29
MCF2L-221ENST00000469415 PRADC1Q9BSG0 188 aa13.22□□□□□ -0.29
MCF2L-221ENST00000469415 TENM4Q6N022 2769 aa13.22□□□□□ -0.29
MCF2L-221ENST00000469415 IGHV1OR15-1A0A075B7D0 117 aa13.21□□□□□ -0.29
MCF2L-221ENST00000469415 RNASE13Q5GAN3 156 aaKnown RBP13.21□□□□□ -0.29
MCF2L-221ENST00000469415 NEXN-AS1Q8NBZ9 246 aa13.21□□□□□ -0.29
MCF2L-221ENST00000469415 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.29
MCF2L-221ENST00000469415 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.29
MCF2L-221ENST00000469415 HLA-DRB4P13762 266 aa13.21□□□□□ -0.29
MCF2L-221ENST00000469415 RBMY1FQ15415 496 aaKnown RBP13.21□□□□□ -0.29
MCF2L-221ENST00000469415 SAMD5Q5TGI4 173 aa13.21□□□□□ -0.29
MCF2L-221ENST00000469415 Q6YL49 198 aa13.21□□□□□ -0.29
MCF2L-221ENST00000469415 HLA-DRB4X5D2U9 266 aa13.21□□□□□ -0.29
MCF2L-221ENST00000469415 PLNP26678 52 aa13.21□□□□□ -0.3
MCF2L-221ENST00000469415 SAMD13Q5VXD3 122 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms