RNA–Protein interactions for RNA: ENST00000468937.2

SYNE1-218, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 688 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-218ENST00000468937 RBMY1DP0C7P1 496 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 RBMY1A1P0DJD3 496 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 HIST1H1EP10412 219 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 ADCYAP1P18509 176 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 NPPCP23582 126 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 ATP5G3P48201 142 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 PPT1P50897 306 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 UBE2G2P60604 165 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 UBE2L3P68036 154 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 MEF2BQ02080 365 aaPredicted RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 C1orf194Q5T5A4 169 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 KCNIP4Q6PIL6 250 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 UQCC3Q6UW78 93 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 BPIFA4PQ86YQ2 179 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 WFDC9Q8NEX5 89 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 OR11H1Q8NG94 326 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 METTL26Q96S19 204 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 C20orf24Q9BUV8 137 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 SMDT1Q9H4I9 107 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 DAZ1Q9NQZ3 744 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 TMEM167BQ9NRX6 74 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 ZNF586Q9NXT0 402 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 GNG13Q9P2W3 67 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 SMPXQ9UHP9 88 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 VAX2Q9UIW0 290 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 TSSC4Q9Y5U2 329 aaPredicted RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 IGHV3-49A0A0A0MS15 119 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 IGHV3-74A0A0B4J1X5 117 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 IGHV3-66A0A0C4DH42 116 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 TMEM218A2RU14 115 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 C2orf70A6NJV1 201 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 TMEM250H0YL14 139 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 K7EIL1 84 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 SLC17A3O00476 420 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 IFNA1P01562 189 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 RPL7P18124 248 aaKnown RBP2.65□□□□□ -1.99
SYNE1-218ENST00000468937 CBLN1P23435 193 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 S100A7P31151 101 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 TAGLN2P37802 199 aaKnown RBP2.65□□□□□ -1.99
SYNE1-218ENST00000468937 SYNJ2BPP57105 145 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 PDE6HQ13956 83 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 PEA15Q15121 130 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 GUCA2BQ16661 112 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 RPEL1Q2QD12 228 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 C10orf91Q5T1B1 145 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 NEGR1Q7Z3B1 354 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 S100A7AQ86SG5 101 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 IQCF2Q8IXL9 164 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 OR8I2Q8N0Y5 310 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 RXFP4Q8TDU9 374 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 RMI2Q96E14 147 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 LINC00052Q96N35 136 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 GPR82Q96P67 336 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 TXNDC17Q9BRA2 123 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 EIF5A2Q9GZV4 153 aaKnown RBP2.65□□□□□ -1.99
SYNE1-218ENST00000468937 TREM1Q9NP99 234 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 CARHSP1Q9Y2V2 147 aaKnown RBP2.65□□□□□ -1.99
SYNE1-218ENST00000468937 UFC1Q9Y3C8 167 aa2.65□□□□□ -1.99
SYNE1-218ENST00000468937 TRBV20OR9-2A0A075B6H5 130 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 TRAV8-2A0A0B4J237 113 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 PLAC8L1A1L4L8 177 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 PGPA6NDG6 321 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 KRBOX1C9JBD0 128 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 F6UZH7 168 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 M0R3E3 92 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 OVOL1O14753 267 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 PDE6DO43924 150 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 SFTA3P0C7M3 94 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 S100A1P23297 94 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 HLA-DMBP28068 263 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 GALR1P47211 349 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 RANP62826 216 aaKnown RBP2.64□□□□□ -1.99
SYNE1-218ENST00000468937 MAJINQ3KP22 176 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 KRTAP13-2Q52LG2 175 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 TCF24Q7RTU0 167 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 EXOC3-AS1Q8N2X6 119 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 C5orf17Q8NAS9 161 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 OR9G4Q8NGQ1 327 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 DCANP1Q8TF63 244 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 BLNKQ8WV28 456 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 TCEAL7Q9BRU2 100 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 SLC50A1Q9BRV3 221 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 DERL1Q9BUN8 251 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 RHPN1-AS1Q9BWJ2 59 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 SEC11CQ9BY50 192 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 NKX6-2Q9C056 277 aaPredicted RBP2.64□□□□□ -1.99
SYNE1-218ENST00000468937 SLC35B3Q9H1N7 401 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 RPH3ALQ9UNE2 315 aa2.64□□□□□ -1.99
SYNE1-218ENST00000468937 BIRC6Q9NR09 4857 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 MUC4Q99102 2169 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 C9JCJ5 164 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 F8W036 122 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 IGLV2-8P01709 118 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 TCRAP04437 139 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 SLC25A5P05141 298 aaKnown RBP2.63□□□□□ -1.99
SYNE1-218ENST00000468937 GNG5P63218 68 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 PSG9Q00887 426 aa2.63□□□□□ -1.99
SYNE1-218ENST00000468937 REG3AQ06141 175 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms