RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 IGKV1-33P01594 117 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 IGKV1-5P01602 117 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 CD2P06729 351 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 LYNX1P0DP58 116 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 CSRP1P21291 193 aaKnown RBP2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 CRYBB3P26998 211 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 HLA-DMBP28068 263 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 RPL35P42766 123 aaKnown RBP2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 INSL3P51460 131 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 EBI3Q14213 229 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 KISS1Q15726 138 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 Q5BKY6 102 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 C10orf91Q5T1B1 145 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 C10orf128Q5T292 105 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 GTF2H5Q6ZYL4 71 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 SLC25A26Q70HW3 274 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 MIR17HGQ75NE6 70 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 SPATA12Q7Z6I5 190 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZFAND2AQ8N6M9 145 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZNF418Q8TF45 676 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 SPTSSAQ969W0 71 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 S100A16Q96FQ6 103 aaKnown RBP2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 MIEN1Q9BRT3 115 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 NPCDR1Q9BY65 106 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 CYTL1Q9NRR1 136 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 TNFSF18Q9UNG2 199 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 KLK5Q9Y337 293 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 FAM215AQ9Y5M1 114 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 S4R3C0 116 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZZEF1O43149 2961 aa2.27□□□□□ -2.05
HMGB1P25-201ENST00000468402 ABCA4P78363 2273 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 WNK2Q9Y3S1 2297 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 MAP1BP46821 2468 aaKnown RBP2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 IGHV1-18A0A0C4DH31 117 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 A0A0D9SG52 128 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 LOC107984640A0A0U1RRK4 108 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 OR2T8A6NH00 312 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 COLCA2A8K830 154 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 A8MWV9 139 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 DEFB108AA8MXU0 73 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 H3BMM0 161 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 C19orf84I3L1E1 186 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 J3QQQ9 107 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 TMEM256-PLSCR3K7ERE1 68 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 M0R143 59 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 NPFFO15130 113 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 HIST1H2BKO60814 126 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 LY6HO94772 140 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 NCR2O95944 276 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 TCL1BO95988 128 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 NPYP01303 97 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 MT-ND6P03923 174 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 HIST1H2BJP06899 126 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 IGLC6P0CF74 106 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 CRYGSP22914 178 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 NFYAP23511 347 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 DYNLT3P51808 116 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 RHOGP84095 191 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 EIF4EBP1Q13541 118 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 LINC01554Q52M75 96 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 LDLRAD2Q5SZI1 272 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 FAM27BQ5VT28 67 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 RPP25LQ8N5L8 163 aaKnown RBP2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 TEX29Q8N6K0 151 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 DEFB108BQ8NET1 73 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 OR4B1Q8NGF8 309 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 OR5A2Q8NGI9 324 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 COPS9Q8WXC6 57 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 LEAP2Q969E1 77 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 UBE2WQ96B02 151 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 S100A13Q99584 98 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 SCRT1Q9BWW7 348 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 MRPL32Q9BYC8 188 aaKnown RBP2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 ABRACLQ9P1F3 81 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 TIMM9Q9Y5J7 89 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 V9GYS6 101 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 AKAP6Q13023 2319 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 TACC2O95359 2948 aa2.26□□□□□ -2.05
HMGB1P25-201ENST00000468402 CHD8Q9HCK8 2581 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 NCOR2Q9Y618 2525 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 USF3Q68DE3 2245 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 TRBV7-6A0A0J9YX20 115 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 TMEM218A2RU14 115 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 C7orf71A4D174 169 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 TMEM14DPA8MWL7 114 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 A8MWP4 228 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 BUB1B-PAK6H3BSN5 160 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 RPL36A-HNRNPH2H7BZ11 118 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 CXCL1P09341 107 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 ZNF705BP0CI00 300 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 P0DMU3 169 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 FAM231AP0DMU4 169 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 FAM231CP0DMU5 169 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 LINC00694P0DN24 101 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 ETV6P41212 452 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 RAB5CP51148 216 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 QRFPP83859 136 aa2.25□□□□□ -2.05
HMGB1P25-201ENST00000468402 MIAQ16674 131 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms