RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 GTSCR1Q86UQ5 136 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 C18orf32Q8TCD1 76 aa5.09□□□□□ -1.59
SCAF4-204ENST00000467731 MRPL53Q96EL3 112 aaKnown RBP5.09□□□□□ -1.59
SCAF4-204ENST00000467731 TMEM250H0YL14 139 aa5.09□□□□□ -1.6
SCAF4-204ENST00000467731 MRPL23Q16540 153 aaKnown RBP5.09□□□□□ -1.6
SCAF4-204ENST00000467731 GOLT1AQ6ZVE7 132 aa5.09□□□□□ -1.6
SCAF4-204ENST00000467731 SGK494Q96LW2 274 aa5.09□□□□□ -1.6
SCAF4-204ENST00000467731 LINC00479Q96M42 142 aa5.09□□□□□ -1.6
SCAF4-204ENST00000467731 PRR25Q96S07 402 aa5.09□□□□□ -1.6
SCAF4-204ENST00000467731 C19orf73Q9NVV2 129 aa5.09□□□□□ -1.6
SCAF4-204ENST00000467731 TRAV8-1A0A0A6YYK1 113 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 CCDC179H3BU77 68 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 PEX7O00628 323 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 MT-ATP8P03928 68 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 Q6ZUT4 128 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 SPATA12Q7Z6I5 190 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 KCNS1Q96KK3 526 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 ZNF324O75467 553 aaPredicted RBP5.08□□□□□ -1.6
SCAF4-204ENST00000467731 OR8A1Q8NGG7 326 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 OR13C6PQ8NH95 151 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 KIR2DL5BQ8NHK3 375 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 VGLL1Q99990 258 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 CDIP1Q9H305 208 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 NBEAL2Q6ZNJ1 2754 aa5.08□□□□□ -1.6
SCAF4-204ENST00000467731 A0A0J9YX75 114 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 KNCNA6PVL3 124 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 ERCC8Q13216 396 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 C11orf52Q96A22 123 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 PMCHP20382 165 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 EVI2AP22794 236 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 OR10J3Q5JRS4 329 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 Q6AWC8 147 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 EBLN2Q6P2I7 272 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 Q8N1Y9 231 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 OR10J6PQ8NGY7 276 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 RBAKDNA6NC62 111 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 IGKV3-20P01619 116 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 IGLV2-11P01706 119 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 HLA-DRB4P13762 266 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 CMC4P56277 68 aaPredicted RBP5.07□□□□□ -1.6
SCAF4-204ENST00000467731 TMEM75Q8N9X5 138 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 Q8TAT8 98 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 PMCHL2Q9BQD1 86 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 HLA-DRB4X5D2U9 266 aa5.07□□□□□ -1.6
SCAF4-204ENST00000467731 H3BMM0 161 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 ORM1P02763 201 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 UBE2G1P62253 170 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 C9orf47Q6ZRZ4 202 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 AGPAT4-IT1Q9H0P7 198 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 MRPL18Q9H0U6 180 aaKnown RBP5.06□□□□□ -1.6
SCAF4-204ENST00000467731 TRAV9-1A0A075B6T8 112 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 NPIPB6E9PJ23 425 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 NDUFV3P56181 108 aaKnown RBP5.06□□□□□ -1.6
SCAF4-204ENST00000467731 PRNTQ86SH4 94 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 STHQ8IWL8 128 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 FMC1Q96HJ9 113 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 MAP1LC3AQ9H492 121 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 KLF12Q9Y4X4 402 aa5.06□□□□□ -1.6
SCAF4-204ENST00000467731 TRBV20OR9-2A0A075B6H5 130 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 F2Z2F3 143 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 RS1O15537 224 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 PRB2P02812 416 aaPredicted RBP5.05□□□□□ -1.6
SCAF4-204ENST00000467731 SRIP30626 198 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 XGP55808 180 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 FAM19A5Q7Z5A7 132 aaPredicted RBP5.05□□□□□ -1.6
SCAF4-204ENST00000467731 SYT8Q8NBV8 401 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 LINC00477Q96M19 166 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 C20orf78Q9BR46 151 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 ZNF492Q9P255 531 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 RHODO00212 210 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 ZNF138P52744 262 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 WFDC2Q14508 124 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 MEIG1Q5JSS6 88 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 KPRPQ5T749 579 aaPredicted RBP5.05□□□□□ -1.6
SCAF4-204ENST00000467731 Q86TA4 180 aa5.05□□□□□ -1.6
SCAF4-204ENST00000467731 TRPT1Q86TN4 253 aaKnown RBP5.05□□□□□ -1.6
SCAF4-204ENST00000467731 RBMY1BA6NDE4 496 aaKnown RBP5.04□□□□□ -1.6
SCAF4-204ENST00000467731 RBMY1EA6NEQ0 496 aaKnown RBP5.04□□□□□ -1.6
SCAF4-204ENST00000467731 DUSP14O95147 198 aaKnown RBP5.04□□□□□ -1.6
SCAF4-204ENST00000467731 LTAP01374 205 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 RBMY1DP0C7P1 496 aaKnown RBP5.04□□□□□ -1.6
SCAF4-204ENST00000467731 KIR3DS1Q14943 382 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 ANXA2RQ3ZCQ2 193 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 ETDBQ3ZM63 59 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 CENPWQ5EE01 88 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 IGF2BP2-AS1Q96M15 143 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 SCRT2Q9NQ03 307 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 A8MTW9 85 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 IGHV4-30-4P0DP06 118 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 RPL35AP18077 110 aaKnown RBP5.04□□□□□ -1.6
SCAF4-204ENST00000467731 AMTNQ6UX39 209 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 C8orf49Q96NF6 230 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 PRKDCP78527 4128 aaKnown RBP5.04□□□□□ -1.6
SCAF4-204ENST00000467731 MEGF8Q7Z7M0 2845 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 PRSS29PA6NIE9 313 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 J3KT08 172 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 FXYD7P58549 80 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 SPINK13Q1W4C9 94 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 FAM19A4Q96LR4 140 aa5.04□□□□□ -1.6
SCAF4-204ENST00000467731 TRAV12-2A0A075B6T6 113 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms