RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 PDCD10Q9BUL8 212 aa1.03□□□□□ -2.24
SMC4-208ENST00000467468 AGPAT4-IT1Q9H0P7 198 aa1.03□□□□□ -2.24
SMC4-208ENST00000467468 DAPK1P53355 1430 aa1.03□□□□□ -2.24
SMC4-208ENST00000467468 KIF13AQ9H1H9 1805 aa1.03□□□□□ -2.25
SMC4-208ENST00000467468 A6NIN4 97 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 SNCGO76070 127 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 LY6G6CO95867 125 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 HIST1H1DP16402 221 aaKnown RBP1.02□□□□□ -2.25
SMC4-208ENST00000467468 SPINT3P49223 89 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 AFDNP55196 1824 aaKnown RBP1.02□□□□□ -2.25
SMC4-208ENST00000467468 FXYD6P3P58550 94 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 UBE2G1P62253 170 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 BTG2P78543 158 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 MEIG1Q5JSS6 88 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 RPL7L1Q6DKI1 246 aaKnown RBP1.02□□□□□ -2.25
SMC4-208ENST00000467468 ASCC3Q8N3C0 2202 aaKnown RBP1.02□□□□□ -2.25
SMC4-208ENST00000467468 SEC11CQ9BY50 192 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 RERGLQ9H628 205 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 RPRMQ9NS64 109 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 AKAP11Q9UKA4 1901 aa1.02□□□□□ -2.25
SMC4-208ENST00000467468 PHLPP1O60346 1717 aa1.01□□□□□ -2.25
SMC4-208ENST00000467468 A0A1B0GV90 55 aa1.01□□□□□ -2.25
SMC4-208ENST00000467468 CBLN1P23435 193 aa1.01□□□□□ -2.25
SMC4-208ENST00000467468 RPL37P61927 97 aaKnown RBP1.01□□□□□ -2.25
SMC4-208ENST00000467468 PRB3Q04118 309 aaPredicted RBP1.01□□□□□ -2.25
SMC4-208ENST00000467468 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.01□□□□□ -2.25
SMC4-208ENST00000467468 MED12Q93074 2177 aa1.01□□□□□ -2.25
SMC4-208ENST00000467468 LAMB1P07942 1786 aa1.01□□□□□ -2.25
SMC4-208ENST00000467468 BCL9LQ86UU0 1499 aa1□□□□□ -2.25
SMC4-208ENST00000467468 MBD5Q9P267 1494 aa1□□□□□ -2.25
SMC4-208ENST00000467468 ROCK2O75116 1388 aaKnown RBP1□□□□□ -2.25
SMC4-208ENST00000467468 A0A096LNT2 108 aa1□□□□□ -2.25
SMC4-208ENST00000467468 DLEU1O43261 78 aa1□□□□□ -2.25
SMC4-208ENST00000467468 IFNA17P01571 189 aa1□□□□□ -2.25
SMC4-208ENST00000467468 CCL3L1P16619 93 aa1□□□□□ -2.25
SMC4-208ENST00000467468 FGF7P21781 194 aa1□□□□□ -2.25
SMC4-208ENST00000467468 SSBP1Q04837 148 aaKnown RBP1□□□□□ -2.25
SMC4-208ENST00000467468 CFTRP13569 1480 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 ZNF518AQ6AHZ1 1483 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 NAIPQ13075 1403 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 MUC22E2RYF6 1773 aaPredicted RBP0.99□□□□□ -2.25
SMC4-208ENST00000467468 LOC100130705A0A1B0GUX0 176 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 RBAKDNA6NC62 111 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 ZNF137PP52743 207 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 C20orf197Q8N268 126 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 C10orf82Q8WW14 230 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 NAA60Q9H7X0 242 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 SERP1Q9Y6X1 66 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 FOCADQ5VW36 1801 aa0.99□□□□□ -2.25
SMC4-208ENST00000467468 A0A0D9SG42 100 aa0.98□□□□□ -2.25
SMC4-208ENST00000467468 COX7B2Q8TF08 81 aa0.98□□□□□ -2.25
SMC4-208ENST00000467468 DSCR8Q96T75 97 aa0.98□□□□□ -2.25
SMC4-208ENST00000467468 A0A087WTM6 91 aa0.97□□□□□ -2.25
SMC4-208ENST00000467468 C6orf52Q5T4I8 152 aa0.97□□□□□ -2.25
SMC4-208ENST00000467468 Q6AWC8 147 aa0.97□□□□□ -2.25
SMC4-208ENST00000467468 LSM10Q969L4 123 aaKnown RBP0.97□□□□□ -2.25
SMC4-208ENST00000467468 BCORL1Q5H9F3 1711 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 UBE2D1P51668 147 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 S100A7L2Q5SY68 101 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 FAM74A4Q5TZK3 123 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 C12orf73Q69YU5 71 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 ZNF818PQ6ZRF7 136 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 C4orf33Q8N1A6 199 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 SPTSSBQ8NFR3 76 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 C2orf88Q9BSF0 95 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 IFT140Q96RY7 1462 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 NCOA3Q9Y6Q9 1424 aa0.96□□□□□ -2.26
SMC4-208ENST00000467468 TRBV10-3A0A0K0K1G6 114 aa0.95□□□□□ -2.26
SMC4-208ENST00000467468 MCRIP1C9JLW8 97 aa0.95□□□□□ -2.26
SMC4-208ENST00000467468 CCL8P80075 99 aa0.95□□□□□ -2.26
SMC4-208ENST00000467468 Q56UQ5 140 aa0.95□□□□□ -2.26
SMC4-208ENST00000467468 PP6455Q8WZ26 134 aa0.95□□□□□ -2.26
SMC4-208ENST00000467468 SPTBP11277 2137 aa0.95□□□□□ -2.26
SMC4-208ENST00000467468 CLPSL1A2RUU4 121 aa0.94□□□□□ -2.26
SMC4-208ENST00000467468 LINC00587B1AMM8 73 aa0.94□□□□□ -2.26
SMC4-208ENST00000467468 AKAIN1P0CW23 69 aa0.94□□□□□ -2.26
SMC4-208ENST00000467468 Q8N8P6 123 aa0.94□□□□□ -2.26
SMC4-208ENST00000467468 V9GYV3 84 aa0.94□□□□□ -2.26
SMC4-208ENST00000467468 SPEF2Q9C093 1822 aa0.94□□□□□ -2.26
SMC4-208ENST00000467468 KDM6BO15054 1643 aa0.93□□□□□ -2.26
SMC4-208ENST00000467468 WDR7Q9Y4E6 1490 aa0.93□□□□□ -2.26
SMC4-208ENST00000467468 NRXN2Q9P2S2 1712 aa0.93□□□□□ -2.26
SMC4-208ENST00000467468 TRBV7-1A0A0A6YYK4 115 aa0.93□□□□□ -2.26
SMC4-208ENST00000467468 PIGBOS1A0A0B4J2F0 54 aa0.93□□□□□ -2.26
SMC4-208ENST00000467468 SPAARA0A1B0GVQ0 90 aa0.93□□□□□ -2.26
SMC4-208ENST00000467468 SCN3BQ9NY72 215 aa0.93□□□□□ -2.26
SMC4-208ENST00000467468 SPAG17Q6Q759 2223 aa0.93□□□□□ -2.26
SMC4-208ENST00000467468 NALCNQ8IZF0 1738 aa0.92□□□□□ -2.26
SMC4-208ENST00000467468 SMG6Q86US8 1419 aaKnown RBP0.92□□□□□ -2.26
SMC4-208ENST00000467468 C10orf95Q9H7T3 257 aa0.92□□□□□ -2.26
SMC4-208ENST00000467468 PLXNA1Q9UIW2 1896 aa0.91□□□□□ -2.26
SMC4-208ENST00000467468 APOC4-APOC2K7ER74 178 aa0.91□□□□□ -2.26
SMC4-208ENST00000467468 SIX6O95475 246 aa0.91□□□□□ -2.26
SMC4-208ENST00000467468 APOC2P02655 101 aa0.91□□□□□ -2.26
SMC4-208ENST00000467468 TMEM203Q969S6 136 aa0.91□□□□□ -2.26
SMC4-208ENST00000467468 Q96NJ1 140 aa0.91□□□□□ -2.26
SMC4-208ENST00000467468 PHIPQ8WWQ0 1821 aa0.91□□□□□ -2.26
SMC4-208ENST00000467468 A2ML1A8K2U0 1454 aa0.91□□□□□ -2.26
SMC4-208ENST00000467468 HCG22E2RYF7 251 aa0.9□□□□□ -2.27
SMC4-208ENST00000467468 EDDM3BP56851 147 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms