RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 PTTG1IPP53801 180 aa7.32□□□□□ -1.24
UBR4-210ENST00000466969 ID3Q02535 119 aa7.32□□□□□ -1.24
UBR4-210ENST00000466969 GAGE2BQ13066 116 aa7.32□□□□□ -1.24
UBR4-210ENST00000466969 PIK3CD-AS1Q5SR53 167 aa7.32□□□□□ -1.24
UBR4-210ENST00000466969 PHF5AQ7RTV0 110 aaKnown RBP7.32□□□□□ -1.24
UBR4-210ENST00000466969 TYMSOSQ8TAI1 123 aa7.32□□□□□ -1.24
UBR4-210ENST00000466969 TMED6Q8WW62 240 aa7.32□□□□□ -1.24
UBR4-210ENST00000466969 RPP21Q9H633 154 aaKnown RBP7.32□□□□□ -1.24
UBR4-210ENST00000466969 TSC22D2O75157 780 aa7.31□□□□□ -1.24
UBR4-210ENST00000466969 RNASE3P12724 160 aaKnown RBP7.31□□□□□ -1.24
UBR4-210ENST00000466969 MIC13Q5XKP0 118 aa7.31□□□□□ -1.24
UBR4-210ENST00000466969 DIRAS2Q96HU8 199 aa7.31□□□□□ -1.24
UBR4-210ENST00000466969 TREM1Q9NP99 234 aa7.31□□□□□ -1.24
UBR4-210ENST00000466969 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
UBR4-210ENST00000466969 PPP1R1AQ13522 171 aa7.3□□□□□ -1.24
UBR4-210ENST00000466969 CARD19Q96LW7 228 aa7.3□□□□□ -1.24
UBR4-210ENST00000466969 RSL24D1Q9UHA3 163 aaKnown RBP7.3□□□□□ -1.24
UBR4-210ENST00000466969 GVQW2A0A096LPI5 108 aaPredicted RBP7.29□□□□□ -1.24
UBR4-210ENST00000466969 GAGE12HA6NDE8 117 aa7.29□□□□□ -1.24
UBR4-210ENST00000466969 ATP6V1G2O95670 118 aa7.29□□□□□ -1.24
UBR4-210ENST00000466969 S100A4P26447 101 aaKnown RBP7.29□□□□□ -1.24
UBR4-210ENST00000466969 TAS2R30P59541 319 aa7.29□□□□□ -1.24
UBR4-210ENST00000466969 TMEM97Q5BJF2 176 aa7.29□□□□□ -1.24
UBR4-210ENST00000466969 C9orf116Q5BN46 136 aaPredicted RBP7.29□□□□□ -1.24
UBR4-210ENST00000466969 NRARPQ7Z6K4 114 aa7.29□□□□□ -1.24
UBR4-210ENST00000466969 MCFD2Q8NI22 146 aa7.29□□□□□ -1.24
UBR4-210ENST00000466969 SLC25A21Q9BQT8 299 aaPredicted RBP7.29□□□□□ -1.24
UBR4-210ENST00000466969 CTDSP2O14595 271 aa7.28□□□□□ -1.24
UBR4-210ENST00000466969 SCGB1D2O95969 90 aa7.28□□□□□ -1.24
UBR4-210ENST00000466969 AP3S2P59780 193 aa7.28□□□□□ -1.24
UBR4-210ENST00000466969 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
UBR4-210ENST00000466969 TRBV25-1A0A075B6N4 114 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 SULT1A2P50226 295 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 RANP62826 216 aaKnown RBP7.27□□□□□ -1.25
UBR4-210ENST00000466969 ARL16Q0P5N6 197 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 CTF1Q16619 201 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 C20orf203Q8NBC4 194 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 OR10G8Q8NGN5 311 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 PHYHIPLQ96FC7 376 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 BCL7BQ9BQE9 202 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 NMES1Q9C002 83 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 SLIRPQ9GZT3 109 aaKnown RBP7.27□□□□□ -1.25
UBR4-210ENST00000466969 C11orf21Q9P2W6 132 aa7.27□□□□□ -1.25
UBR4-210ENST00000466969 EIF5AL1Q6IS14 154 aaKnown RBP7.26□□□□□ -1.25
UBR4-210ENST00000466969 TSKUQ8WUA8 353 aa7.26□□□□□ -1.25
UBR4-210ENST00000466969 MITD1Q8WV92 249 aa7.26□□□□□ -1.25
UBR4-210ENST00000466969 SLC25A2Q9BXI2 301 aa7.26□□□□□ -1.25
UBR4-210ENST00000466969 LOC107984640A0A0U1RRK4 108 aa7.25□□□□□ -1.25
UBR4-210ENST00000466969 RPL29P47914 159 aaKnown RBP7.25□□□□□ -1.25
UBR4-210ENST00000466969 NTM-AS1Q6ZSK4 140 aa7.25□□□□□ -1.25
UBR4-210ENST00000466969 TOMM5Q8N4H5 51 aa7.25□□□□□ -1.25
UBR4-210ENST00000466969 TVP23CQ96ET8 276 aa7.25□□□□□ -1.25
UBR4-210ENST00000466969 UQCC1Q9NVA1 299 aa7.25□□□□□ -1.25
UBR4-210ENST00000466969 C9orf170A2RU37 121 aa7.24□□□□□ -1.25
UBR4-210ENST00000466969 L7N2F9 121 aa7.24□□□□□ -1.25
UBR4-210ENST00000466969 VAMP2P63027 116 aa7.24□□□□□ -1.25
UBR4-210ENST00000466969 BAXQ07812 192 aa7.24□□□□□ -1.25
UBR4-210ENST00000466969 IAH1Q2TAA2 248 aaPredicted RBP7.24□□□□□ -1.25
UBR4-210ENST00000466969 HYLS1Q96M11 299 aa7.24□□□□□ -1.25
UBR4-210ENST00000466969 DERL1Q9BUN8 251 aa7.24□□□□□ -1.25
UBR4-210ENST00000466969 WDR83OSQ9Y284 106 aa7.24□□□□□ -1.25
UBR4-210ENST00000466969 A0A087X002 238 aa7.23□□□□□ -1.25
UBR4-210ENST00000466969 UBE2L5PA0A1B0GUS4 154 aa7.23□□□□□ -1.25
UBR4-210ENST00000466969 C7orf66A4D0T2 115 aa7.23□□□□□ -1.25
UBR4-210ENST00000466969 TSHBP01222 138 aa7.23□□□□□ -1.25
UBR4-210ENST00000466969 FGF6P10767 208 aa7.23□□□□□ -1.25
UBR4-210ENST00000466969 DEDD2Q8WXF8 326 aa7.23□□□□□ -1.25
UBR4-210ENST00000466969 NDFIP1Q9BT67 221 aa7.23□□□□□ -1.25
UBR4-210ENST00000466969 SSBP4Q9BWG4 385 aaPredicted RBP7.23□□□□□ -1.25
UBR4-210ENST00000466969 OR5AC2Q9NZP5 309 aa7.23□□□□□ -1.25
UBR4-210ENST00000466969 IGLV4-60A0A075B6I1 120 aa7.22□□□□□ -1.25
UBR4-210ENST00000466969 BCAP31P51572 246 aa7.22□□□□□ -1.25
UBR4-210ENST00000466969 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
UBR4-210ENST00000466969 NEXN-AS1Q8NBZ9 246 aa7.22□□□□□ -1.25
UBR4-210ENST00000466969 CMTM2Q8TAZ6 248 aa7.22□□□□□ -1.25
UBR4-210ENST00000466969 FXYD5Q96DB9 178 aa7.22□□□□□ -1.25
UBR4-210ENST00000466969 LINC00526Q96FQ7 95 aa7.22□□□□□ -1.25
UBR4-210ENST00000466969 LYRM2Q9NU23 88 aaPredicted RBP7.22□□□□□ -1.25
UBR4-210ENST00000466969 GSKIPQ9P0R6 139 aa7.22□□□□□ -1.25
UBR4-210ENST00000466969 NEBP20929 6669 aa7.22□□□□□ -1.25
UBR4-210ENST00000466969 ZNF80P51504 273 aaPredicted RBP7.21□□□□□ -1.26
UBR4-210ENST00000466969 SYCNQ0VAF6 134 aa7.21□□□□□ -1.26
UBR4-210ENST00000466969 LINC00304Q8N9R0 145 aa7.21□□□□□ -1.26
UBR4-210ENST00000466969 OR11H4Q8NGC9 324 aa7.21□□□□□ -1.26
UBR4-210ENST00000466969 SFRP2Q96HF1 295 aa7.21□□□□□ -1.26
UBR4-210ENST00000466969 FAM167A-AS1Q96KT0 104 aa7.21□□□□□ -1.26
UBR4-210ENST00000466969 AQP10Q96PS8 301 aa7.21□□□□□ -1.26
UBR4-210ENST00000466969 IGHV1-24A0A0C4DH33 117 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 IGKV3OR2-268A0A0C4DH90 116 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 TRBV6-1A0A0K0K1D8 114 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 A0A1B0GUV1 79 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 CST7O76096 145 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 GCGP01275 180 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 MBPP02686 304 aaPredicted RBP7.2□□□□□ -1.26
UBR4-210ENST00000466969 FGF7P21781 194 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 ZFP69Q49AA0 526 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 GOLT1AQ6ZVE7 132 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 MIR17HGQ75NE6 70 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 KRTAP11-1Q8IUC1 163 aa7.2□□□□□ -1.26
UBR4-210ENST00000466969 IL36BQ9NZH7 164 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms