RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 WDR73Q6P4I2 378 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 LINC01551Q86U37 167 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 NHLRC2Q8NBF2 726 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 GFRA4Q9GZZ7 299 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 RPP21Q9H633 154 aaKnown RBP4.9□□□□□ -1.63
CLDN4-204ENST00000466411 CELA1Q9UNI1 258 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 IGKV3D-20A0A0C4DH25 116 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 GAGE12BA1L429 117 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 M0R036 132 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 SNAI2O43623 268 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 GAGE7O76087 117 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 IGLV2-8P01709 118 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 SFTA3P0C7M3 94 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 TRGC1P0CF51 173 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 GAGE12FP0CL80 117 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 GAGE12GP0CL81 117 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 GAGE12IP0CL82 117 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 SMIM17P0DL12 118 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 P0DMU3 169 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 FAM231AP0DMU4 169 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 FAM231CP0DMU5 169 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 PRB4P10163 310 aaPredicted RBP4.89□□□□□ -1.63
CLDN4-204ENST00000466411 CRIP1P50238 77 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 FAM3BP58499 235 aaPredicted RBP4.89□□□□□ -1.63
CLDN4-204ENST00000466411 RPL19P84098 196 aaKnown RBP4.89□□□□□ -1.63
CLDN4-204ENST00000466411 Q6ZTI0 123 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 SMIM15Q7Z3B0 74 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.89□□□□□ -1.63
CLDN4-204ENST00000466411 OR4C5Q8NGB2 326 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 OR2D3Q8NGH3 330 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 OCC1Q8TAD7 63 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 PCNPQ8WW12 178 aaKnown RBP4.89□□□□□ -1.63
CLDN4-204ENST00000466411 AP1S3Q96PC3 154 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 SCRT2Q9NQ03 307 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 OSTCQ9NRP0 149 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 MDFICQ9P1T7 246 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 PRO0255Q9UI72 69 aa4.89□□□□□ -1.63
CLDN4-204ENST00000466411 TRGV4A0A0C4DH28 118 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 TRBV6-4A0A1B0GX49 114 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 PRSS29PA6NIE9 313 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 F5H768 121 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 H3BVH4 76 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 H7C1H1 209 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 GNRH2O43555 120 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 GATCO43716 136 aaKnown RBP4.88□□□□□ -1.63
CLDN4-204ENST00000466411 NXPH4O95158 308 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 ARMS2P0C7Q2 107 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 RNASE3P12724 160 aaKnown RBP4.88□□□□□ -1.63
CLDN4-204ENST00000466411 NDUFA5Q16718 116 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 SPANXN1Q5VSR9 72 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 FER1L6-AS1Q8NA97 138 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 FRZBQ92765 325 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 SFRP2Q96HF1 295 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 C11orf21Q9P2W6 132 aa4.88□□□□□ -1.63
CLDN4-204ENST00000466411 IGHV4-4A0A075B6R2 117 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 A0A1B0GW15 77 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 LINC00862A6NCI5 91 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 IGLL5B9A064 214 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 MT-ND4LP03901 98 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 S100A8P05109 93 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 HTN3P15516 51 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 CTRLP40313 264 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 IFITM2Q01629 132 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 RHOHQ15669 191 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 ADIRFQ15847 76 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 RNF212Q495C1 297 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 TSKUQ8WUA8 353 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 ISOC2Q96AB3 205 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 PRADC1Q9BSG0 188 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 SEC11CQ9BY50 192 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 CNFNQ9BYD5 112 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 MRPL16Q9NX20 251 aaKnown RBP4.87□□□□□ -1.63
CLDN4-204ENST00000466411 HHLA3Q9XRX5 114 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 ICOSQ9Y6W8 199 aa4.87□□□□□ -1.63
CLDN4-204ENST00000466411 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 TRAV26-1A0A087WT03 109 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 TMSB15BA0A087X1C1 80 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 TRBV10-1A0A0K0K1A3 114 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 PGPEP1LA6NFU8 196 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 K7EN84 100 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 K7EP13 123 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 M0R381 172 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 RS1O15537 224 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 IGLC6P0CF74 106 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 FOXA3P55318 350 aaPredicted RBP4.86□□□□□ -1.63
CLDN4-204ENST00000466411 CCL18P55774 89 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 RPL23P62829 140 aaKnown RBP4.86□□□□□ -1.63
CLDN4-204ENST00000466411 MRPL23Q16540 153 aaKnown RBP4.86□□□□□ -1.63
CLDN4-204ENST00000466411 CFAP126Q5VTH2 177 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 TMEM88Q6PEY1 159 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 NAT8BQ9UHF3 227 aa4.86□□□□□ -1.63
CLDN4-204ENST00000466411 A0A1B0GUT8 65 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 TMEM218A2RU14 115 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 GRIFINA4D1Z8 144 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 F8W036 122 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 PRM2P04554 102 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 GATA1P15976 413 aaPredicted RBP4.85□□□□□ -1.63
CLDN4-204ENST00000466411 MALP21145 153 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 SRIP30626 198 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 RAB4BP61018 213 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms