RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PYY3Q5JQD4 70 aa10.09□□□□□ -0.79
HDAC6-215ENST00000465457 RNASEKQ6P5S7 137 aaKnown RBP10.09□□□□□ -0.79
HDAC6-215ENST00000465457 OR11H12B2RN74 326 aa10.08□□□□□ -0.8
HDAC6-215ENST00000465457 D6R8Y8 96 aa10.08□□□□□ -0.8
HDAC6-215ENST00000465457 NUPR1O60356 82 aa10.08□□□□□ -0.8
HDAC6-215ENST00000465457 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
HDAC6-215ENST00000465457 SPINK13Q1W4C9 94 aa10.08□□□□□ -0.8
HDAC6-215ENST00000465457 MRPL51Q4U2R6 128 aaKnown RBP10.08□□□□□ -0.8
HDAC6-215ENST00000465457 MUC21Q5SSG8 566 aa10.08□□□□□ -0.8
HDAC6-215ENST00000465457 IL17DQ8TAD2 202 aa10.08□□□□□ -0.8
HDAC6-215ENST00000465457 MRAP2Q96G30 205 aa10.08□□□□□ -0.8
HDAC6-215ENST00000465457 AP1S3Q96PC3 154 aa10.08□□□□□ -0.8
HDAC6-215ENST00000465457 MUC21A0A0G2JKD1 596 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 MUC21A0A140T8X8 626 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 KNCNA6PVL3 124 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 M0R2Z0 102 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 IGKV3-20P01619 116 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 CD7P09564 240 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 LINC00614P0C842 121 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 FA2HQ7L5A8 372 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 NIT1Q86X76 327 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 SYT8Q8NBV8 401 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 LINC00467Q9BRT7 94 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 DPH3P1Q9H4G8 78 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 NIT2Q9NQR4 276 aa10.07□□□□□ -0.8
HDAC6-215ENST00000465457 DYNC1H1Q14204 4646 aaKnown RBP10.06□□□□□ -0.8
HDAC6-215ENST00000465457 FAT2Q9NYQ8 4349 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 PPP1R17O96001 155 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 INSP01308 110 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 RNASE3P12724 160 aaKnown RBP10.06□□□□□ -0.8
HDAC6-215ENST00000465457 NUTF2P61970 127 aaKnown RBP10.06□□□□□ -0.8
HDAC6-215ENST00000465457 S100A12P80511 92 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 KIR3DS1Q14943 382 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 ODF3L2Q3SX64 289 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 Q6ZQT7 251 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 PRSS3P2Q8NHM4 247 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 RNF185Q96GF1 192 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 MAP1LC3AQ9H492 121 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 AP5S1Q9NUS5 200 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 MSRB1Q9NZV6 116 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 DNAH6Q9C0G6 4158 aa10.06□□□□□ -0.8
HDAC6-215ENST00000465457 IGHV3-16A0A0C4DH30 117 aa10.05□□□□□ -0.8
HDAC6-215ENST00000465457 M0R381 172 aa10.05□□□□□ -0.8
HDAC6-215ENST00000465457 SSTP61278 116 aa10.05□□□□□ -0.8
HDAC6-215ENST00000465457 STHQ8IWL8 128 aa10.05□□□□□ -0.8
HDAC6-215ENST00000465457 C9orf85Q96MD7 179 aa10.05□□□□□ -0.8
HDAC6-215ENST00000465457 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
HDAC6-215ENST00000465457 DNAH2Q9P225 4427 aa10.04□□□□□ -0.8
HDAC6-215ENST00000465457 TRAV12-2A0A075B6T6 113 aa10.04□□□□□ -0.8
HDAC6-215ENST00000465457 GNRH2O43555 120 aa10.04□□□□□ -0.8
HDAC6-215ENST00000465457 SMIM17P0DL12 118 aa10.04□□□□□ -0.8
HDAC6-215ENST00000465457 DEFB125Q8N687 156 aa10.04□□□□□ -0.8
HDAC6-215ENST00000465457 WFDC10AQ9H1F0 79 aa10.04□□□□□ -0.8
HDAC6-215ENST00000465457 GSN-AS1Q9NRJ2 163 aa10.04□□□□□ -0.8
HDAC6-215ENST00000465457 TIMM8BQ9Y5J9 83 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-215ENST00000465457 EVI2AP22794 236 aa10.03□□□□□ -0.8
HDAC6-215ENST00000465457 PIK3CD-AS1Q5SR53 167 aa10.03□□□□□ -0.8
HDAC6-215ENST00000465457 Q6ZWC4 215 aa10.03□□□□□ -0.8
HDAC6-215ENST00000465457 TRPT1Q86TN4 253 aaKnown RBP10.03□□□□□ -0.8
HDAC6-215ENST00000465457 URB1-AS1Q96HZ7 61 aa10.03□□□□□ -0.8
HDAC6-215ENST00000465457 HSPB8Q9UJY1 196 aa10.03□□□□□ -0.8
HDAC6-215ENST00000465457 CBY3A6NI87 242 aa10.02□□□□□ -0.81
HDAC6-215ENST00000465457 PRSS47A8MTI9 375 aa10.02□□□□□ -0.81
HDAC6-215ENST00000465457 CRXO43186 299 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-215ENST00000465457 SCGB1D1O95968 90 aa10.02□□□□□ -0.81
HDAC6-215ENST00000465457 POM121L12Q8N7R1 296 aa10.02□□□□□ -0.81
HDAC6-215ENST00000465457 PTH2Q96A98 100 aa10.02□□□□□ -0.81
HDAC6-215ENST00000465457 NDUFAF3Q9BU61 184 aa10.02□□□□□ -0.81
HDAC6-215ENST00000465457 IGHV1-24A0A0C4DH33 117 aa10.01□□□□□ -0.81
HDAC6-215ENST00000465457 LINC01546A6NGU7 62 aa10.01□□□□□ -0.81
HDAC6-215ENST00000465457 TNFRSF6BO95407 300 aa10.01□□□□□ -0.81
HDAC6-215ENST00000465457 NPYP01303 97 aa10.01□□□□□ -0.81
HDAC6-215ENST00000465457 ZNF415Q09FC8 603 aa10.01□□□□□ -0.81
HDAC6-215ENST00000465457 DNAH11Q96DT5 4516 aa10.01□□□□□ -0.81
HDAC6-215ENST00000465457 K7EMI3 77 aa10□□□□□ -0.81
HDAC6-215ENST00000465457 LEPROTL1O95214 131 aa10□□□□□ -0.81
HDAC6-215ENST00000465457 NCR2O95944 276 aa10□□□□□ -0.81
HDAC6-215ENST00000465457 KRTDAPP60985 99 aa10□□□□□ -0.81
HDAC6-215ENST00000465457 MORN3Q6PF18 240 aaPredicted RBP10□□□□□ -0.81
HDAC6-215ENST00000465457 FAM19A2Q8N3H0 131 aa10□□□□□ -0.81
HDAC6-215ENST00000465457 C20orf78Q9BR46 151 aa10□□□□□ -0.81
HDAC6-215ENST00000465457 C1QTNF4Q9BXJ3 329 aa10□□□□□ -0.81
HDAC6-215ENST00000465457 KRTAP4-5Q9BYR2 181 aa10□□□□□ -0.81
HDAC6-215ENST00000465457 C20orf202A1L168 122 aa9.99□□□□□ -0.81
HDAC6-215ENST00000465457 BTF3P20290 206 aaKnown RBP9.99□□□□□ -0.81
HDAC6-215ENST00000465457 IFI27P40305 119 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-215ENST00000465457 GTSCR1Q86UQ5 136 aa9.99□□□□□ -0.81
HDAC6-215ENST00000465457 C14orf178Q8N769 122 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-215ENST00000465457 SPXQ9BT56 116 aa9.99□□□□□ -0.81
HDAC6-215ENST00000465457 SMKR1H3BMG3 65 aa9.98□□□□□ -0.81
HDAC6-215ENST00000465457 ZNF124Q15973 351 aa9.98□□□□□ -0.81
HDAC6-215ENST00000465457 PMCHL1Q16048 86 aa9.98□□□□□ -0.81
HDAC6-215ENST00000465457 Q8N8P6 123 aa9.98□□□□□ -0.81
HDAC6-215ENST00000465457 NRACQ8N912 160 aa9.98□□□□□ -0.81
HDAC6-215ENST00000465457 TMEM70Q9BUB7 260 aa9.98□□□□□ -0.81
HDAC6-215ENST00000465457 MDFICQ9P1T7 246 aa9.98□□□□□ -0.81
HDAC6-215ENST00000465457 LOC389332A0A1B0GUA5 103 aa9.97□□□□□ -0.81
HDAC6-215ENST00000465457 TSTD3H0UI37 97 aa9.97□□□□□ -0.81
HDAC6-215ENST00000465457 HBDP02042 147 aa9.97□□□□□ -0.81
HDAC6-215ENST00000465457 MGPP08493 103 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms