RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 IMUPQ9GZP8 106 aa5.45□□□□□ -1.54
CLSTN1-204ENST00000464286 MDFICQ9P1T7 246 aa5.45□□□□□ -1.54
CLSTN1-204ENST00000464286 TP53TG1Q9Y2A0 90 aa5.45□□□□□ -1.54
CLSTN1-204ENST00000464286 S4R3C0 116 aa5.45□□□□□ -1.54
CLSTN1-204ENST00000464286 TRBV27A0A0K0K1C4 114 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 NDUFA4O00483 81 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 TECTAO75443 2155 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 ATP5G1P05496 136 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 FBXL19-AS1Q494R0 122 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 LINC01620Q4KN68 170 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 IGFL4Q6B9Z1 124 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 FAM159AQ6UWV7 190 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 CLEC19AQ6UXS0 136 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 TRPT1Q86TN4 253 aaKnown RBP5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 C14orf178Q8N769 122 aaPredicted RBP5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 Q8N9W7 124 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 ITLN2Q8WWU7 325 aaPredicted RBP5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 USMG5Q96IX5 58 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 ODF3Q96PU9 254 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 C11orf21Q9P2W6 132 aa5.44□□□□□ -1.54
CLSTN1-204ENST00000464286 IGLV4-69A0A075B6H9 119 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 IGHV3-23P01764 117 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 IGHV3-33P01772 117 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 UBE2E1P51965 193 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 POLR2KP53803 58 aaKnown RBP5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 NDPQ00604 133 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 ECSCRQ19T08 205 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 CFAP161Q6P656 301 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 TMEM263Q8WUH6 116 aaKnown RBP5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 TMEM101Q96IK0 257 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 FAM110AQ9BQ89 295 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 REV3LO60673 3130 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 ICE1Q9Y2F5 2266 aa5.43□□□□□ -1.54
CLSTN1-204ENST00000464286 ARFGEF3Q5TH69 2177 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 TRAV2A0A0B4J234 112 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 A0A0J9YXY3 114 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 TMEM223A0PJW6 202 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 CLPSL1A2RUU4 121 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 A4D1N5 150 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 F5H697 171 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 LGALS9O00182 355 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 TIMM17BO60830 172 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 DUSP14O95147 198 aaKnown RBP5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 CRIP2P52943 208 aaPredicted RBP5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 ANXA2RQ3ZCQ2 193 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 C2orf82Q6UX34 121 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 ZFAND2AQ8N6M9 145 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 DEFB124Q8NES8 71 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 RPL39LQ96EH5 51 aaKnown RBP5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 FAM19A4Q96LR4 140 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 MSRB2Q9Y3D2 182 aa5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 URB1O60287 2271 aaKnown RBP5.42□□□□□ -1.54
CLSTN1-204ENST00000464286 MAP1BP46821 2468 aaKnown RBP5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 B5MCH6 92 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 I3L3M4 83 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 ATP6V0E1O15342 81 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 RNASE4P34096 147 aaKnown RBP5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 CIRBPQ14011 172 aaKnown RBP5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 LY6DQ14210 128 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 SUMO4Q6EEV6 95 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 GPHB5Q86YW7 130 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 PTH2Q96A98 100 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 ZNF256Q9Y2P7 627 aaPredicted RBP5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 MOB4Q9Y3A3 225 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 PYGO1Q9Y3Y4 419 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 DNAH14Q0VDD8 3507 aa5.41□□□□□ -1.54
CLSTN1-204ENST00000464286 FAM208BQ5VWN6 2430 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 WDFY4Q6ZS81 3184 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 TRAV41A0A0B4J266 112 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 CRYGDP07320 174 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 DEFB121Q5J5C9 76 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 C15orf53Q8NAA6 179 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 KLHL30-AS1Q8NEE0 82 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 NTN5Q8WTR8 489 aaPredicted RBP5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 AJUBAQ96IF1 538 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 TIMM21Q9BVV7 248 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 SS18L2Q9UHA2 77 aa5.4□□□□□ -1.54
CLSTN1-204ENST00000464286 TRGV11A0A075B6L2 103 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 TRBV7-7A0A0K0K1E9 115 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 FAM90A27PA6NNH2 459 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 KLLNB2CW77 178 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 K7EMT4 169 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 SOCS3O14543 225 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 MUSTN1Q8IVN3 82 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 SIRPDQ9H106 197 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 PPDPFQ9H3Y8 114 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 EDA2RQ9HAV5 297 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 ICOSQ9Y6W8 199 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 KIF25-AS1Q9Y6Z4 181 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 ACACBO00763 2458 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 SVILO95425 2214 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 ABCA1O95477 2261 aa5.39□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV3-35A0A0C4DH35 117 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 IGHV3-66A0A0C4DH42 116 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 LYNX1G3V0Z9 82 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 TSHBP01222 138 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 LYNX1P0DP58 116 aa5.38□□□□□ -1.55
CLSTN1-204ENST00000464286 PF4V1P10720 104 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms