RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 Q9UF83 564 aa9.56□□□□□ -0.88
SNRNP40-203ENST00000463988 HERC1Q15751 4861 aa9.55□□□□□ -0.88
SNRNP40-203ENST00000463988 M0R036 132 aa9.55□□□□□ -0.88
SNRNP40-203ENST00000463988 C1QBP02746 253 aa9.55□□□□□ -0.88
SNRNP40-203ENST00000463988 RGS21Q2M5E4 152 aa9.55□□□□□ -0.88
SNRNP40-203ENST00000463988 SFRP2Q96HF1 295 aa9.55□□□□□ -0.88
SNRNP40-203ENST00000463988 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
SNRNP40-203ENST00000463988 GRIFINA4D1Z8 144 aa9.54□□□□□ -0.88
SNRNP40-203ENST00000463988 TPT1P13693 172 aaKnown RBP9.54□□□□□ -0.88
SNRNP40-203ENST00000463988 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
SNRNP40-203ENST00000463988 COX11Q9Y6N1 276 aa9.54□□□□□ -0.88
SNRNP40-203ENST00000463988 VPS13BQ7Z7G8 4022 aa9.54□□□□□ -0.88
SNRNP40-203ENST00000463988 TRBV10-1A0A0K0K1A3 114 aa9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 FAM229AH3BQW9 127 aa9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 SMR3BP02814 79 aaPredicted RBP9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 S100A9P06702 114 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 SEC11BP0C7V7 166 aa9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 ZNF345Q14585 488 aa9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 DAZ4Q86SG3 579 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 ZFP82Q8N141 532 aa9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 Q8N3U1 123 aa9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 DAZ3Q9NR90 486 aaKnown RBP9.53□□□□□ -0.88
SNRNP40-203ENST00000463988 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.88
SNRNP40-203ENST00000463988 UMAD1C9J7I0 102 aa9.52□□□□□ -0.89
SNRNP40-203ENST00000463988 AKR1C3P42330 323 aa9.52□□□□□ -0.89
SNRNP40-203ENST00000463988 FAM74A4Q5TZK3 123 aa9.52□□□□□ -0.89
SNRNP40-203ENST00000463988 KCNRGQ8N5I3 272 aa9.52□□□□□ -0.89
SNRNP40-203ENST00000463988 MBD3L1Q8WWY6 194 aa9.52□□□□□ -0.89
SNRNP40-203ENST00000463988 DNAH8Q96JB1 4490 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 A0A087WWL8 130 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 TMSB15BA0A087X1C1 80 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 M0R381 172 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 PAGE4O60829 102 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 WFDC2Q14508 124 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 NIT1Q86X76 327 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 RMI2Q96E14 147 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 URGCP-MRPS24S4R325 110 aa9.51□□□□□ -0.89
SNRNP40-203ENST00000463988 CXCL1P09341 107 aa9.5□□□□□ -0.89
SNRNP40-203ENST00000463988 RPL36AP83881 106 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-203ENST00000463988 SFT2D1Q8WV19 159 aa9.5□□□□□ -0.89
SNRNP40-203ENST00000463988 RPL36ALQ969Q0 106 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-203ENST00000463988 MYCBP2O75592 4640 aa9.5□□□□□ -0.89
SNRNP40-203ENST00000463988 TRBV7-3A0A075B6L6 115 aa9.49□□□□□ -0.89
SNRNP40-203ENST00000463988 HMSDA8MTL9 139 aa9.49□□□□□ -0.89
SNRNP40-203ENST00000463988 UBE2D3P61077 147 aa9.49□□□□□ -0.89
SNRNP40-203ENST00000463988 UBE2D2P62837 147 aa9.49□□□□□ -0.89
SNRNP40-203ENST00000463988 ELOBQ15370 118 aa9.49□□□□□ -0.89
SNRNP40-203ENST00000463988 Q6ZSA8 131 aa9.49□□□□□ -0.89
SNRNP40-203ENST00000463988 OR10G8Q8NGN5 311 aa9.49□□□□□ -0.89
SNRNP40-203ENST00000463988 MLST8Q9BVC4 326 aa9.49□□□□□ -0.89
SNRNP40-203ENST00000463988 FAM30AQ9NZY2 134 aa9.49□□□□□ -0.89
SNRNP40-203ENST00000463988 A0A0D9SG52 128 aa9.48□□□□□ -0.89
SNRNP40-203ENST00000463988 SMLR1H3BR10 107 aa9.48□□□□□ -0.89
SNRNP40-203ENST00000463988 RAB4BP61018 213 aa9.48□□□□□ -0.89
SNRNP40-203ENST00000463988 HAMPP81172 84 aa9.48□□□□□ -0.89
SNRNP40-203ENST00000463988 FAM213BQ8TBF2 198 aa9.48□□□□□ -0.89
SNRNP40-203ENST00000463988 A0A087WX48 190 aa9.47□□□□□ -0.89
SNRNP40-203ENST00000463988 LECT2O14960 151 aa9.47□□□□□ -0.89
SNRNP40-203ENST00000463988 PFDN1O60925 122 aa9.47□□□□□ -0.89
SNRNP40-203ENST00000463988 EIF5AP63241 154 aaKnown RBP9.47□□□□□ -0.89
SNRNP40-203ENST00000463988 KCNIP4Q6PIL6 250 aa9.47□□□□□ -0.89
SNRNP40-203ENST00000463988 BAGE2Q86Y30 109 aa9.47□□□□□ -0.89
SNRNP40-203ENST00000463988 Q8N976 141 aa9.47□□□□□ -0.89
SNRNP40-203ENST00000463988 SSBP4Q9BWG4 385 aaPredicted RBP9.47□□□□□ -0.89
SNRNP40-203ENST00000463988 KLK12Q9UKR0 248 aa9.47□□□□□ -0.89
SNRNP40-203ENST00000463988 SCO2A0A1W2PP80 73 aa9.46□□□□□ -0.9
SNRNP40-203ENST00000463988 BCL2L11O43521 198 aa9.46□□□□□ -0.9
SNRNP40-203ENST00000463988 SNAI2O43623 268 aa9.46□□□□□ -0.9
SNRNP40-203ENST00000463988 OR5AL1P0C617 328 aa9.46□□□□□ -0.9
SNRNP40-203ENST00000463988 Q0VG73 95 aa9.46□□□□□ -0.9
SNRNP40-203ENST00000463988 PRR27Q6MZM9 219 aa9.46□□□□□ -0.9
SNRNP40-203ENST00000463988 ATRAIDQ6UW56 229 aa9.46□□□□□ -0.9
SNRNP40-203ENST00000463988 BAALCQ8WXS3 180 aa9.46□□□□□ -0.9
SNRNP40-203ENST00000463988 ZNF471Q9BX82 626 aaPredicted RBP9.46□□□□□ -0.9
SNRNP40-203ENST00000463988 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
SNRNP40-203ENST00000463988 TRBV6-8A0A0A6YYG3 113 aa9.45□□□□□ -0.9
SNRNP40-203ENST00000463988 KANTRA0A1W2PQU2 76 aa9.45□□□□□ -0.9
SNRNP40-203ENST00000463988 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
SNRNP40-203ENST00000463988 TMUB2Q71RG4 321 aa9.45□□□□□ -0.9
SNRNP40-203ENST00000463988 OR10AG1Q8NH19 301 aa9.45□□□□□ -0.9
SNRNP40-203ENST00000463988 UBE2WQ96B02 151 aa9.45□□□□□ -0.9
SNRNP40-203ENST00000463988 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.44□□□□□ -0.9
SNRNP40-203ENST00000463988 A0A1B0GV50 99 aa9.44□□□□□ -0.9
SNRNP40-203ENST00000463988 RPL19P84098 196 aaKnown RBP9.44□□□□□ -0.9
SNRNP40-203ENST00000463988 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.44□□□□□ -0.9
SNRNP40-203ENST00000463988 PKIAP61925 76 aa9.43□□□□□ -0.9
SNRNP40-203ENST00000463988 ZNF56Q15929 161 aa9.43□□□□□ -0.9
SNRNP40-203ENST00000463988 SPANXN1Q5VSR9 72 aa9.43□□□□□ -0.9
SNRNP40-203ENST00000463988 NEXN-AS1Q8NBZ9 246 aa9.43□□□□□ -0.9
SNRNP40-203ENST00000463988 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
SNRNP40-203ENST00000463988 TRAV1-1A0A0B4J248 108 aa9.42□□□□□ -0.9
SNRNP40-203ENST00000463988 RBFOX3A6NFN3 312 aa9.42□□□□□ -0.9
SNRNP40-203ENST00000463988 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
SNRNP40-203ENST00000463988 PLA2G1BP04054 148 aaKnown RBP9.42□□□□□ -0.9
SNRNP40-203ENST00000463988 RPL35P42766 123 aaKnown RBP9.42□□□□□ -0.9
SNRNP40-203ENST00000463988 TMEM97Q5BJF2 176 aa9.42□□□□□ -0.9
SNRNP40-203ENST00000463988 C11orf52Q96A22 123 aa9.42□□□□□ -0.9
SNRNP40-203ENST00000463988 MANBALQ9NQG1 85 aa9.42□□□□□ -0.9
SNRNP40-203ENST00000463988 C14orf177Q52M58 125 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms