RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ESDP10768 282 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 RRN3P1Q2M238 152 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 PIK3CD-AS1Q5SR53 167 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 FAM74A4Q5TZK3 123 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 PTH2Q96A98 100 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 C16orf74Q96GX8 76 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 LAMTOR2Q9Y2Q5 125 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 G3V4G9 280 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 NPYP01303 97 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 AKR1D1P51857 326 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 RNASEKQ6P5S7 137 aaKnown RBP13.74□□□□□ -0.21
CCDC78-206ENST00000463539 IL17DQ8TAD2 202 aa13.74□□□□□ -0.21
CCDC78-206ENST00000463539 CMYA5Q8N3K9 4069 aa13.73□□□□□ -0.21
CCDC78-206ENST00000463539 HIST1H2BLQ99880 126 aa13.73□□□□□ -0.21
CCDC78-206ENST00000463539 TNFRSF6BO95407 300 aa13.72□□□□□ -0.21
CCDC78-206ENST00000463539 FABP4P15090 132 aa13.72□□□□□ -0.21
CCDC78-206ENST00000463539 GATA1P15976 413 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-206ENST00000463539 LINC00315P59091 139 aa13.72□□□□□ -0.21
CCDC78-206ENST00000463539 NIT1Q86X76 327 aa13.72□□□□□ -0.21
CCDC78-206ENST00000463539 POM121L12Q8N7R1 296 aa13.72□□□□□ -0.21
CCDC78-206ENST00000463539 SAMD10Q9BYL1 202 aa13.72□□□□□ -0.21
CCDC78-206ENST00000463539 MRPL16Q9NX20 251 aaKnown RBP13.72□□□□□ -0.21
CCDC78-206ENST00000463539 CRYGDP07320 174 aa13.71□□□□□ -0.21
CCDC78-206ENST00000463539 A8MWV9 139 aa13.71□□□□□ -0.22
CCDC78-206ENST00000463539 SAMD5Q5TGI4 173 aa13.71□□□□□ -0.22
CCDC78-206ENST00000463539 PRSS3P2Q8NHM4 247 aa13.71□□□□□ -0.22
CCDC78-206ENST00000463539 TMEM18Q96B42 140 aa13.71□□□□□ -0.22
CCDC78-206ENST00000463539 LOC389332A0A1B0GUA5 103 aa13.7□□□□□ -0.22
CCDC78-206ENST00000463539 F5H697 171 aa13.7□□□□□ -0.22
CCDC78-206ENST00000463539 HSBP1O75506 76 aa13.7□□□□□ -0.22
CCDC78-206ENST00000463539 NRACQ8N912 160 aa13.7□□□□□ -0.22
CCDC78-206ENST00000463539 RASL10AQ92737 203 aa13.7□□□□□ -0.22
CCDC78-206ENST00000463539 CHCHD1Q96BP2 118 aaKnown RBP13.7□□□□□ -0.22
CCDC78-206ENST00000463539 URB1-AS1Q96HZ7 61 aa13.7□□□□□ -0.22
CCDC78-206ENST00000463539 NDUFAF3Q9BU61 184 aa13.7□□□□□ -0.22
CCDC78-206ENST00000463539 MAP1LC3AQ9H492 121 aa13.7□□□□□ -0.22
CCDC78-206ENST00000463539 LINC00614P0C842 121 aa13.69□□□□□ -0.22
CCDC78-206ENST00000463539 ZNF56Q15929 161 aa13.69□□□□□ -0.22
CCDC78-206ENST00000463539 DEFB135Q30KP9 77 aa13.69□□□□□ -0.22
CCDC78-206ENST00000463539 TRGV1A0A0A0MS02 117 aa13.69□□□□□ -0.22
CCDC78-206ENST00000463539 IFI27P40305 119 aaPredicted RBP13.69□□□□□ -0.22
CCDC78-206ENST00000463539 DAZ2Q13117 558 aaKnown RBP13.69□□□□□ -0.22
CCDC78-206ENST00000463539 SUMO4Q6EEV6 95 aa13.69□□□□□ -0.22
CCDC78-206ENST00000463539 PACRGQ96M98 296 aaPredicted RBP13.69□□□□□ -0.22
CCDC78-206ENST00000463539 PLAC8L1A1L4L8 177 aa13.68□□□□□ -0.22
CCDC78-206ENST00000463539 PMCHP20382 165 aa13.68□□□□□ -0.22
CCDC78-206ENST00000463539 FA2HQ7L5A8 372 aa13.68□□□□□ -0.22
CCDC78-206ENST00000463539 NOP10Q9NPE3 64 aaKnown RBP13.68□□□□□ -0.22
CCDC78-206ENST00000463539 AMTP48728 403 aa13.67□□□□□ -0.22
CCDC78-206ENST00000463539 LGALS9BQ3B8N2 356 aa13.67□□□□□ -0.22
CCDC78-206ENST00000463539 CFAP126Q5VTH2 177 aa13.67□□□□□ -0.22
CCDC78-206ENST00000463539 SMIM9A6NGZ8 99 aa13.67□□□□□ -0.22
CCDC78-206ENST00000463539 PPP1R17O96001 155 aa13.67□□□□□ -0.22
CCDC78-206ENST00000463539 OR10D4PQ8NGN7 298 aa13.67□□□□□ -0.22
CCDC78-206ENST00000463539 AP5S1Q9NUS5 200 aa13.67□□□□□ -0.22
CCDC78-206ENST00000463539 X6R8D5 127 aa13.67□□□□□ -0.22
CCDC78-206ENST00000463539 A8MZ25 164 aa13.66□□□□□ -0.22
CCDC78-206ENST00000463539 Q6ZTI0 123 aa13.66□□□□□ -0.22
CCDC78-206ENST00000463539 FAM19A2Q8N3H0 131 aa13.66□□□□□ -0.22
CCDC78-206ENST00000463539 RPL39LQ96EH5 51 aaKnown RBP13.66□□□□□ -0.22
CCDC78-206ENST00000463539 RHODO00212 210 aa13.65□□□□□ -0.22
CCDC78-206ENST00000463539 IGHV3-73A0A0B4J1V6 119 aa13.64□□□□□ -0.23
CCDC78-206ENST00000463539 RS1O15537 224 aa13.64□□□□□ -0.23
CCDC78-206ENST00000463539 EMP1P54849 157 aa13.64□□□□□ -0.23
CCDC78-206ENST00000463539 UFSP1Q6NVU6 142 aa13.64□□□□□ -0.23
CCDC78-206ENST00000463539 Q6ZWC4 215 aa13.64□□□□□ -0.23
CCDC78-206ENST00000463539 C20orf78Q9BR46 151 aa13.64□□□□□ -0.23
CCDC78-206ENST00000463539 OVOL2Q9BRP0 275 aa13.64□□□□□ -0.23
CCDC78-206ENST00000463539 NXT2Q9NPJ8 142 aaKnown RBP13.64□□□□□ -0.23
CCDC78-206ENST00000463539 SUMO2P61956 95 aaKnown RBP13.64□□□□□ -0.23
CCDC78-206ENST00000463539 NOTCH1P46531 2555 aa13.64□□□□□ -0.23
CCDC78-206ENST00000463539 M0QY20 66 aa13.63□□□□□ -0.23
CCDC78-206ENST00000463539 OR11H2Q8NH07 326 aa13.63□□□□□ -0.23
CCDC78-206ENST00000463539 MGAM2Q2M2H8 2515 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 IGHV1-24A0A0C4DH33 117 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 PRSS47A8MTI9 375 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 PMCHL1Q16048 86 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 Q8N8P6 123 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 OR4C5Q8NGB2 326 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 NBEAL2Q6ZNJ1 2754 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 H7C1H1 209 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 ZFP2Q6ZN57 461 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 RNF183Q96D59 192 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 SMIM2Q9BVW6 85 aa13.62□□□□□ -0.23
CCDC78-206ENST00000463539 NBEAL1Q6ZS30 2694 aa13.61□□□□□ -0.23
CCDC78-206ENST00000463539 ST20Q9HBF5 79 aa13.61□□□□□ -0.23
CCDC78-206ENST00000463539 DNAH3Q8TD57 4116 aa13.61□□□□□ -0.23
CCDC78-206ENST00000463539 IGLV2-18A0A075B6J9 118 aa13.6□□□□□ -0.23
CCDC78-206ENST00000463539 TRGV2A0A075B6R0 118 aa13.6□□□□□ -0.23
CCDC78-206ENST00000463539 GAGE12BA1L429 117 aa13.6□□□□□ -0.23
CCDC78-206ENST00000463539 GAGE7O76087 117 aa13.6□□□□□ -0.23
CCDC78-206ENST00000463539 GAGE12FP0CL80 117 aa13.6□□□□□ -0.23
CCDC78-206ENST00000463539 GAGE12GP0CL81 117 aa13.6□□□□□ -0.23
CCDC78-206ENST00000463539 GAGE12IP0CL82 117 aa13.6□□□□□ -0.23
CCDC78-206ENST00000463539 EDA2RQ9HAV5 297 aa13.6□□□□□ -0.23
CCDC78-206ENST00000463539 TRAV4A0A0B4J268 109 aa13.6□□□□□ -0.23
CCDC78-206ENST00000463539 LINC01546A6NGU7 62 aa13.59□□□□□ -0.23
CCDC78-206ENST00000463539 ZNF479Q96JC4 524 aa13.59□□□□□ -0.23
CCDC78-206ENST00000463539 TRBV6-5A0A0K0K1A5 114 aa13.58□□□□□ -0.24
CCDC78-206ENST00000463539 MIFP14174 115 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms