RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 GAGE12BA1L429 117 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 COLCA2A8K830 154 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 SCO1O75880 301 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 GAGE7O76087 117 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 GAGE12FP0CL80 117 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 GAGE12GP0CL81 117 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 GAGE12IP0CL82 117 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 DAD1P61803 113 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 CFAP126Q5VTH2 177 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 MSRB1Q9NZV6 116 aa7.61□□□□□ -1.19
RTF1-202ENST00000462276 A0A0J9YWU9 116 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 DEFB4AO15263 64 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 PPP1R17O96001 155 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 PPBPP02775 128 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 CRYGDP07320 174 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 DEFB130BP0DP73 79 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 DEFB130AP0DP74 79 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 RAB5AP20339 215 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 EVI2AP22794 236 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 RAB4BP61018 213 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 SSTP61278 116 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 FAM104BQ5XKR9 115 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 C14orf178Q8N769 122 aaPredicted RBP7.6□□□□□ -1.19
RTF1-202ENST00000462276 POM121L12Q8N7R1 296 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 C11orf45Q8TAV5 145 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 KIF25-AS1Q9Y6Z4 181 aa7.6□□□□□ -1.19
RTF1-202ENST00000462276 H7C1H1 209 aa7.59□□□□□ -1.19
RTF1-202ENST00000462276 ATP5G1P05496 136 aa7.59□□□□□ -1.19
RTF1-202ENST00000462276 UFSP1Q6NVU6 142 aa7.59□□□□□ -1.19
RTF1-202ENST00000462276 TMEM136Q6ZRR5 245 aa7.59□□□□□ -1.19
RTF1-202ENST00000462276 MRAP2Q96G30 205 aa7.59□□□□□ -1.19
RTF1-202ENST00000462276 U3KQK5 164 aa7.59□□□□□ -1.19
RTF1-202ENST00000462276 APCSP02743 223 aa7.58□□□□□ -1.2
RTF1-202ENST00000462276 RAB4AP20338 218 aa7.58□□□□□ -1.2
RTF1-202ENST00000462276 LINC00315P59091 139 aa7.58□□□□□ -1.2
RTF1-202ENST00000462276 EDA2RQ9HAV5 297 aa7.58□□□□□ -1.2
RTF1-202ENST00000462276 LAMTOR2Q9Y2Q5 125 aa7.58□□□□□ -1.2
RTF1-202ENST00000462276 TRAPPC1Q9Y5R8 145 aa7.58□□□□□ -1.2
RTF1-202ENST00000462276 STAB2Q8WWQ8 2551 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 A0A087WWL8 130 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 TRBV10-1A0A0K0K1A3 114 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 TRBV6-4A0A1B0GX49 114 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 F5H697 171 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 IGHV3-53P01767 116 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 RPS10P46783 165 aaKnown RBP7.57□□□□□ -1.2
RTF1-202ENST00000462276 C12orf74Q32Q52 190 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 FAM74A4Q5TZK3 123 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 AMN1Q8IY45 258 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 SAMD10Q9BYL1 202 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 JPT2Q9H910 190 aa7.57□□□□□ -1.2
RTF1-202ENST00000462276 KMT2CQ8NEZ4 4911 aaKnown RBP7.57□□□□□ -1.2
RTF1-202ENST00000462276 TRGV4A0A0C4DH28 118 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 PHOX2AO14813 284 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 CKS2P33552 79 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 FABP9Q0Z7S8 132 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 ORMDL3Q8N138 153 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 RNF185Q96GF1 192 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 ZNF479Q96JC4 524 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 MRPL18Q9H0U6 180 aaKnown RBP7.56□□□□□ -1.2
RTF1-202ENST00000462276 PRO0255Q9UI72 69 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 HHLA3Q9XRX5 114 aa7.56□□□□□ -1.2
RTF1-202ENST00000462276 MUC4Q99102 2169 aa7.55□□□□□ -1.2
RTF1-202ENST00000462276 H3BNG1 76 aa7.55□□□□□ -1.2
RTF1-202ENST00000462276 MGPP08493 103 aa7.55□□□□□ -1.2
RTF1-202ENST00000462276 GATA1P15976 413 aaPredicted RBP7.55□□□□□ -1.2
RTF1-202ENST00000462276 FHL2Q14192 279 aa7.55□□□□□ -1.2
RTF1-202ENST00000462276 ZNF56Q15929 161 aa7.55□□□□□ -1.2
RTF1-202ENST00000462276 DNAJC30Q96LL9 226 aa7.55□□□□□ -1.2
RTF1-202ENST00000462276 PRADC1Q9BSG0 188 aa7.55□□□□□ -1.2
RTF1-202ENST00000462276 TENM3Q9P273 2699 aa7.55□□□□□ -1.2
RTF1-202ENST00000462276 DNAH9Q9NYC9 4486 aa7.55□□□□□ -1.2
RTF1-202ENST00000462276 TRAV10A0A0B4J240 114 aa7.54□□□□□ -1.2
RTF1-202ENST00000462276 M0QY20 66 aa7.54□□□□□ -1.2
RTF1-202ENST00000462276 RHOHQ15669 191 aa7.54□□□□□ -1.2
RTF1-202ENST00000462276 MRPL51Q4U2R6 128 aaKnown RBP7.54□□□□□ -1.2
RTF1-202ENST00000462276 SUMO4Q6EEV6 95 aa7.54□□□□□ -1.2
RTF1-202ENST00000462276 RYR3Q15413 4870 aa7.53□□□□□ -1.2
RTF1-202ENST00000462276 TRBV6-5A0A0K0K1A5 114 aa7.53□□□□□ -1.2
RTF1-202ENST00000462276 F5H768 121 aa7.53□□□□□ -1.2
RTF1-202ENST00000462276 SH2D6Q7Z4S9 175 aa7.53□□□□□ -1.2
RTF1-202ENST00000462276 C20orf78Q9BR46 151 aa7.53□□□□□ -1.2
RTF1-202ENST00000462276 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
RTF1-202ENST00000462276 HUWE1Q7Z6Z7 4374 aaKnown RBP7.52□□□□□ -1.21
RTF1-202ENST00000462276 DEFB131BA0A096LNP1 70 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 IGHV3-73A0A0B4J1V6 119 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 D6R8Y8 96 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 K7EQD1 137 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 PAX4O43316 350 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 TRGC2P03986 189 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 CRYBA4P53673 196 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 NANOS2P60321 138 aaKnown RBP7.52□□□□□ -1.21
RTF1-202ENST00000462276 RPL32P62910 135 aaKnown RBP7.52□□□□□ -1.21
RTF1-202ENST00000462276 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
RTF1-202ENST00000462276 Q6ZTC4 211 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 SLC25A29Q8N8R3 303 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.52□□□□□ -1.21
RTF1-202ENST00000462276 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
RTF1-202ENST00000462276 PRELID3AQ96N28 172 aa7.52□□□□□ -1.21
RTF1-202ENST00000462276 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms