RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 SUMO1P63165 101 aaKnown RBP3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 SLC38A11Q08AI6 406 aa3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 IQCJQ1A5X6 159 aa3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 ZFP69Q49AA0 526 aa3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 C1orf146Q5VVC0 180 aa3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 C12orf45Q8N5I9 185 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 SVIPQ8NHG7 77 aa3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 LINC00526Q96FQ7 95 aa3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 OPRPNQ99935 248 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 GPN1Q9HCN4 374 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 SHPKQ9UHJ6 478 aa3.71□□□□□ -1.82
TRAPPC10-205ENST00000461889 DUXBA0A1W2PPF3 345 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 APOMO95445 188 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 BCL2P10415 239 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 SULT1A2P50226 295 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 MEF2BQ02080 365 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 SPANXN5Q5MJ07 72 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 C22orf42Q6IC83 251 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 NEXN-AS1Q8NBZ9 246 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 PYDC1Q8WXC3 89 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 S100A16Q96FQ6 103 aaKnown RBP3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 AQP10Q96PS8 301 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 RTBDNQ9BSG5 229 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 C11orf21Q9P2W6 132 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 MGAT4CQ9UBM8 478 aa3.7□□□□□ -1.82
TRAPPC10-205ENST00000461889 IGHV1-58A0A0C4DH39 117 aa3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 PTGES3LE9PB15 166 aa3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 EIF4EBP3O60516 100 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 MT1FP04733 61 aa3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 CSN1S1P47710 185 aa3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 OR1L4Q8NGR5 311 aa3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 CHCHD10Q8WYQ3 142 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 ISOC2Q96AB3 205 aa3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 PFDN5Q99471 154 aa3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 SOSTQ9BQB4 213 aa3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 NDUFB11Q9NX14 153 aa3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 STRAPQ9Y3F4 350 aaKnown RBP3.69□□□□□ -1.82
TRAPPC10-205ENST00000461889 IGKV2D-26A0A0A0MRZ7 120 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 TRBV6-1A0A0K0K1D8 114 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 SYNGR2O43760 224 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 NUPR1O60356 82 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 PYYP10082 97 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 SLC25A6P12236 298 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 UBE2BP63146 152 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 FOXI1Q12951 378 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 FAM74A4Q5TZK3 123 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 Q6ZRG5 221 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 LYZL2Q7Z4W2 148 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 NUP35Q8NFH5 326 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 SFRP2Q96HF1 295 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 DERL1Q9BUN8 251 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 SLIRPQ9GZT3 109 aaKnown RBP3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 MED28Q9H204 178 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 PRR13Q9NZ81 148 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 RABL2AQ9UBK7 228 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 RABL2BQ9UNT1 228 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 FLVCR2Q9UPI3 526 aa3.68□□□□□ -1.82
TRAPPC10-205ENST00000461889 IGLV4-69A0A075B6H9 119 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 IGHV1-24A0A0C4DH33 117 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 F6UZH7 168 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 ZNF561-AS1K7EIQ3 104 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 TMEM127O75204 238 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 NBEAP1P0C6P0 100 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 CAMPP49913 170 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 RNASE10Q5GAN6 216 aaKnown RBP3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 KRTAP7-1Q8IUC3 87 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 C8orf59Q8N0T1 100 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 C14orf166Q9Y224 244 aaKnown RBP3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 UBE2D4Q9Y2X8 147 aa3.67□□□□□ -1.82
TRAPPC10-205ENST00000461889 H3BP45 60 aa3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 GNAO1P09471 354 aa3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 RPL28P46779 137 aaKnown RBP3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 RRAS2P62070 204 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 ZFP1Q6P2D0 407 aa3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 DYNC2LI1Q8TCX1 351 aa3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 MGST2Q99735 147 aa3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 TREM1Q9NP99 234 aa3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 IL36BQ9NZH7 164 aa3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 PSG8Q9UQ74 426 aa3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 KCNIP3Q9Y2W7 256 aa3.66□□□□□ -1.82
TRAPPC10-205ENST00000461889 PIGBOS1A0A0B4J2F0 54 aa3.65□□□□□ -1.83
TRAPPC10-205ENST00000461889 RAB4BP61018 213 aa3.65□□□□□ -1.83
TRAPPC10-205ENST00000461889 BCL7BQ9BQE9 202 aa3.65□□□□□ -1.83
TRAPPC10-205ENST00000461889 TXNL4BQ9NX01 149 aaKnown RBP3.65□□□□□ -1.83
TRAPPC10-205ENST00000461889 CCDC59Q9P031 241 aaKnown RBP3.65□□□□□ -1.83
TRAPPC10-205ENST00000461889 NDUFA12Q9UI09 145 aa3.65□□□□□ -1.83
TRAPPC10-205ENST00000461889 C19orf71A6NCJ1 209 aa3.64□□□□□ -1.83
TRAPPC10-205ENST00000461889 M0QXV9 152 aa3.64□□□□□ -1.83
TRAPPC10-205ENST00000461889 S100A4P26447 101 aaKnown RBP3.64□□□□□ -1.83
TRAPPC10-205ENST00000461889 SDC2P34741 201 aa3.64□□□□□ -1.83
TRAPPC10-205ENST00000461889 ZNF80P51504 273 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC10-205ENST00000461889 MXD1Q05195 221 aa3.64□□□□□ -1.83
TRAPPC10-205ENST00000461889 UBE2NLQ5JXB2 153 aa3.64□□□□□ -1.83
TRAPPC10-205ENST00000461889 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC10-205ENST00000461889 SDHCQ99643 169 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC10-205ENST00000461889 GGACTQ9BVM4 153 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms