RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 RASL10AQ92737 203 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 EEF1AKMT3Q96AZ1 226 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 AJUBAQ96IF1 538 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 SCGB3A1Q96QR1 104 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 UBTD1Q9HAC8 227 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 HRNRQ86YZ3 2850 aaPredicted RBP6.45□□□□□ -1.38
VPS50-208ENST00000458707 DOPEY1Q5JWR5 2465 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 CSMD1Q96PZ7 3565 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 MYO9AB2RTY4 2548 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 ABCA12Q86UK0 2595 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 IGHV3-66A0A0C4DH42 116 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 PRSS29PA6NIE9 313 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 HOXA3O43365 443 aaPredicted RBP6.45□□□□□ -1.38
VPS50-208ENST00000458707 MED14OSP0DP75 135 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 COX6B1P14854 86 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 GRNP28799 593 aaKnown RBP6.45□□□□□ -1.38
VPS50-208ENST00000458707 UBE2D1P51668 147 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 ECSCRQ19T08 205 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 AMTNQ6UX39 209 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 C9orf139Q6ZV77 190 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 BAALCQ8WXS3 180 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 DPH3P1Q9H4G8 78 aa6.45□□□□□ -1.38
VPS50-208ENST00000458707 IFITM1P13164 125 aa6.44□□□□□ -1.38
VPS50-208ENST00000458707 POM121L12Q8N7R1 296 aa6.44□□□□□ -1.38
VPS50-208ENST00000458707 LINC00477Q96M19 166 aa6.44□□□□□ -1.38
VPS50-208ENST00000458707 RAXQ9Y2V3 346 aa6.44□□□□□ -1.38
VPS50-208ENST00000458707 ITPR1Q14643 2758 aa6.44□□□□□ -1.38
VPS50-208ENST00000458707 TENM4Q6N022 2769 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 ADARB2-AS1A8MUL3 147 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 J3KT08 172 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 PPP1R17O96001 155 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 ZFP36P26651 326 aaKnown RBP6.43□□□□□ -1.38
VPS50-208ENST00000458707 UBE2E1P51965 193 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 CFAP126Q5VTH2 177 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 C2orf66Q6UXQ4 117 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 ZFAND2AQ8N6M9 145 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 PRADC1Q9BSG0 188 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 IGHV3OR16-13A0A075B7E8 117 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 IGHV3-74A0A0B4J1X5 117 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 G3V318 75 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 UBE2D3P61077 147 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 UBE2D2P62837 147 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 MEIG1Q5JSS6 88 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 FAM19A5Q7Z5A7 132 aaPredicted RBP6.43□□□□□ -1.38
VPS50-208ENST00000458707 APRG1Q8IVJ8 170 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 DLX4Q92988 240 aaPredicted RBP6.43□□□□□ -1.38
VPS50-208ENST00000458707 RPL39LQ96EH5 51 aaKnown RBP6.43□□□□□ -1.38
VPS50-208ENST00000458707 C16orf92Q96LL3 132 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 C20orf173Q96LM9 149 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 FAM19A4Q96LR4 140 aa6.43□□□□□ -1.38
VPS50-208ENST00000458707 IGHV3-49A0A0A0MS15 119 aa6.42□□□□□ -1.38
VPS50-208ENST00000458707 TRAV21A0A0B4J279 112 aa6.42□□□□□ -1.38
VPS50-208ENST00000458707 IGHV1-69DA0A0B4J2H0 117 aa6.42□□□□□ -1.38
VPS50-208ENST00000458707 LINC01549A6NIU2 74 aa6.42□□□□□ -1.38
VPS50-208ENST00000458707 CD7P09564 240 aa6.42□□□□□ -1.38
VPS50-208ENST00000458707 INSL3P51460 131 aa6.42□□□□□ -1.38
VPS50-208ENST00000458707 C19orf54Q5BKX5 351 aa6.42□□□□□ -1.38
VPS50-208ENST00000458707 LINC01587Q99440 93 aa6.42□□□□□ -1.38
VPS50-208ENST00000458707 KLK15Q9H2R5 256 aa6.42□□□□□ -1.38
VPS50-208ENST00000458707 LINC01548A6NM66 108 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 ZNF815PA8K554 130 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 SOCS3O14543 225 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 OVOL1O14753 267 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 NXPH4O95158 308 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 APOMO95445 188 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 IGF1P05019 195 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 CRYGDP07320 174 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 ASIPP42127 132 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 SEC61GP60059 68 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 GAGE2BQ13066 116 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 FHL3Q13643 280 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 GAGE2EQ4V326 116 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 PAPPA-AS1Q5QFB9 102 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 GPHB5Q86YW7 130 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 ZNF843Q8N446 348 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 TMEM101Q96IK0 257 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 GAGE2DQ9UEU5 116 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 IGHV4OR15-8A0A075B7B6 117 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 A0A087WW49 117 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 FAM223BA6NKX1 122 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 CRIP2P52943 208 aaPredicted RBP6.41□□□□□ -1.38
VPS50-208ENST00000458707 TTC32Q5I0X7 151 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 FAM223AQ8IWN6 122 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 C14orf178Q8N769 122 aaPredicted RBP6.41□□□□□ -1.38
VPS50-208ENST00000458707 C5orf56Q8N8D9 126 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 PLEKHB2Q96CS7 222 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 PHLDA3Q9Y5J5 127 aa6.41□□□□□ -1.38
VPS50-208ENST00000458707 TEX15Q9BXT5 2789 aa6.4□□□□□ -1.38
VPS50-208ENST00000458707 IGLV4-69A0A075B6H9 119 aa6.4□□□□□ -1.39
VPS50-208ENST00000458707 C9JAW5 83 aa6.4□□□□□ -1.39
VPS50-208ENST00000458707 RNASE3P12724 160 aaKnown RBP6.4□□□□□ -1.39
VPS50-208ENST00000458707 SAA4P35542 130 aa6.4□□□□□ -1.39
VPS50-208ENST00000458707 ANXA2RQ3ZCQ2 193 aa6.4□□□□□ -1.39
VPS50-208ENST00000458707 FAM159AQ6UWV7 190 aa6.4□□□□□ -1.39
VPS50-208ENST00000458707 OR10J6PQ8NGY7 276 aa6.4□□□□□ -1.39
VPS50-208ENST00000458707 PPDPFLQ8WWR9 84 aa6.4□□□□□ -1.39
VPS50-208ENST00000458707 DUX3Q96PT4 197 aa6.4□□□□□ -1.39
VPS50-208ENST00000458707 SPANXDQ9BXN6 97 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms