RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 CDIP1Q9H305 208 aa7.43□□□□□ -1.22
THBS3-203ENST00000457183 MRPL16Q9NX20 251 aaKnown RBP7.43□□□□□ -1.22
THBS3-203ENST00000457183 CLPSL1A2RUU4 121 aa7.43□□□□□ -1.22
THBS3-203ENST00000457183 H3BVH4 76 aa7.43□□□□□ -1.22
THBS3-203ENST00000457183 MT-ATP8P03928 68 aa7.43□□□□□ -1.22
THBS3-203ENST00000457183 LGALS1P09382 135 aaKnown RBP7.43□□□□□ -1.22
THBS3-203ENST00000457183 SMCPP49901 116 aaPredicted RBP7.43□□□□□ -1.22
THBS3-203ENST00000457183 C8orf86Q6ZUL3 223 aa7.43□□□□□ -1.22
THBS3-203ENST00000457183 SCGB3A1Q96QR1 104 aa7.43□□□□□ -1.22
THBS3-203ENST00000457183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.42□□□□□ -1.22
THBS3-203ENST00000457183 IGHV3-49A0A0A0MS15 119 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 TGFAP01135 160 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 PTH2Q96A98 100 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 YAE1D1Q9NRH1 226 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 ZNF469Q96JG9 3925 aaPredicted RBP7.42□□□□□ -1.22
THBS3-203ENST00000457183 MTORP42345 2549 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 FHL3Q13643 280 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 OXLD1Q5BKU9 147 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 TEX29Q8N6K0 151 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 ZNF418Q8TF45 676 aaPredicted RBP7.42□□□□□ -1.22
THBS3-203ENST00000457183 TOMM6Q96B49 74 aa7.42□□□□□ -1.22
THBS3-203ENST00000457183 LOC107984156A0A0G2JMH3 177 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 LINC01548A6NM66 108 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 PSMB2P49721 201 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 ORMDL2Q53FV1 153 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 ZFP2Q6ZN57 461 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 ARL17AQ8IVW1 177 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 C1QTNF4Q9BXJ3 329 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 VCX2Q9H322 139 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
THBS3-203ENST00000457183 ECSCRQ19T08 205 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 CFAP126Q5VTH2 177 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 C9orf47Q6ZRZ4 202 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 PRADC1Q9BSG0 188 aa7.41□□□□□ -1.22
THBS3-203ENST00000457183 SPRY2O43597 315 aa7.4□□□□□ -1.22
THBS3-203ENST00000457183 XGP55808 180 aa7.4□□□□□ -1.22
THBS3-203ENST00000457183 PRR9Q5T870 116 aa7.4□□□□□ -1.22
THBS3-203ENST00000457183 CLEC19AQ6UXS0 136 aa7.4□□□□□ -1.22
THBS3-203ENST00000457183 Q8N9W7 124 aa7.4□□□□□ -1.22
THBS3-203ENST00000457183 LINC01549A6NIU2 74 aa7.4□□□□□ -1.23
THBS3-203ENST00000457183 ZNF815PA8K554 130 aa7.4□□□□□ -1.23
THBS3-203ENST00000457183 M0QXV9 152 aa7.4□□□□□ -1.23
THBS3-203ENST00000457183 FSHBP01225 129 aa7.4□□□□□ -1.23
THBS3-203ENST00000457183 IGHV4-38-2P0DP08 117 aa7.4□□□□□ -1.23
THBS3-203ENST00000457183 BAALCQ8WXS3 180 aa7.4□□□□□ -1.23
THBS3-203ENST00000457183 RASL10AQ92737 203 aa7.4□□□□□ -1.23
THBS3-203ENST00000457183 DLX4Q92988 240 aaPredicted RBP7.4□□□□□ -1.23
THBS3-203ENST00000457183 RPL39LQ96EH5 51 aaKnown RBP7.4□□□□□ -1.23
THBS3-203ENST00000457183 CCDC140Q96MF4 163 aa7.4□□□□□ -1.23
THBS3-203ENST00000457183 M0R381 172 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 AVPP01185 164 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 IGF1P05019 195 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 SCGB1D4Q6XE38 83 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 SMIM20Q8N5G0 67 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 FAM110DQ8TAY7 271 aaPredicted RBP7.39□□□□□ -1.23
THBS3-203ENST00000457183 PRSS29PA6NIE9 313 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 C2orf66Q6UXQ4 117 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 Q6ZUT4 128 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
THBS3-203ENST00000457183 MRPL53Q96EL3 112 aaKnown RBP7.39□□□□□ -1.23
THBS3-203ENST00000457183 SETD2Q9BYW2 2564 aaPredicted RBP7.38□□□□□ -1.23
THBS3-203ENST00000457183 INAFM1C9JVW0 142 aa7.38□□□□□ -1.23
THBS3-203ENST00000457183 UBE2D1P51668 147 aa7.38□□□□□ -1.23
THBS3-203ENST00000457183 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
THBS3-203ENST00000457183 C14orf178Q8N769 122 aaPredicted RBP7.38□□□□□ -1.23
THBS3-203ENST00000457183 ATP6V0E2Q8NHE4 81 aa7.38□□□□□ -1.23
THBS3-203ENST00000457183 RNF183Q96D59 192 aa7.38□□□□□ -1.23
THBS3-203ENST00000457183 METTL26Q96S19 204 aa7.38□□□□□ -1.23
THBS3-203ENST00000457183 ATP6V0E1O15342 81 aa7.38□□□□□ -1.23
THBS3-203ENST00000457183 TSPAN13O95857 204 aa7.38□□□□□ -1.23
THBS3-203ENST00000457183 BRD3OSQ6XYD6 125 aa7.38□□□□□ -1.23
THBS3-203ENST00000457183 KLHL30-AS1Q8NEE0 82 aa7.38□□□□□ -1.23
THBS3-203ENST00000457183 G3V318 75 aa7.37□□□□□ -1.23
THBS3-203ENST00000457183 CARD19Q96LW7 228 aa7.37□□□□□ -1.23
THBS3-203ENST00000457183 C2CD3Q4AC94 2353 aa7.37□□□□□ -1.23
THBS3-203ENST00000457183 IGHV3OR16-10A0A075B7F0 116 aa7.37□□□□□ -1.23
THBS3-203ENST00000457183 KRTAP1-1Q07627 177 aa7.37□□□□□ -1.23
THBS3-203ENST00000457183 C16orf92Q96LL3 132 aa7.37□□□□□ -1.23
THBS3-203ENST00000457183 DPH3P1Q9H4G8 78 aa7.37□□□□□ -1.23
THBS3-203ENST00000457183 CD7P09564 240 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 UBE2D3P61077 147 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 UBE2D2P62837 147 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 CITED2Q99967 270 aaPredicted RBP7.36□□□□□ -1.23
THBS3-203ENST00000457183 TLN2Q9Y4G6 2542 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 ZANQ9Y493 2812 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 CSPG4Q6UVK1 2322 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 S100A4P26447 101 aaKnown RBP7.36□□□□□ -1.23
THBS3-203ENST00000457183 C20orf173Q96LM9 149 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 PHLDA3Q9Y5J5 127 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 CRYGDP07320 174 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 MGPP08493 103 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 KLK9Q2XQG4 91 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 KIR2DL4Q99706 377 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 KLK9Q9UKQ9 250 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 U3KQE9 123 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 NF1P21359 2839 aa7.36□□□□□ -1.23
THBS3-203ENST00000457183 HIVEP2P31629 2446 aa7.35□□□□□ -1.23
THBS3-203ENST00000457183 DUSP14O95147 198 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms