RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TMEM78Q5T7P6 136 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 PPP1R27Q86WC6 154 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 PPDPFLQ8WWR9 84 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 F6UB75 175 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 BAALCQ8WXS3 180 aa3.4□□□□□ -1.87
DEPDC1-202ENST00000456315 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 H7C2G1 150 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 TRIAP1O43715 76 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 SLC25A20O43772 301 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 ASIPP42127 132 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 OR11H6Q8NGC7 330 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 C2orf48Q96LS8 159 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 MRPS17Q9Y2R5 130 aaKnown RBP3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 FAM215AQ9Y5M1 114 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 KIF25-AS1Q9Y6Z4 181 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 IGHV3-64A0A075B6Q5 118 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 TEX36Q5VZQ5 186 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 SLC25A29Q8N8R3 303 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 RNF125Q96EQ8 232 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 AAMDCQ9H7C9 122 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 MDFICQ9P1T7 246 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 TRAV8-3A0A0A6YYJ7 113 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 PIGBOS1A0A0B4J2F0 54 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 RPL7P18124 248 aaKnown RBP3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 CD40P25942 277 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 RIGQ13278 110 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 TDHQ8IZJ6 230 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 C15orf53Q8NAA6 179 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 ZNF815PA8K554 130 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 C17orf100A8MU93 164 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 H3BRN7 92 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 CEACAM4O75871 244 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 ERHP84090 104 aaKnown RBP3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 MEIG1Q5JSS6 88 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 FAM57AQ8TBR7 257 aa3.39□□□□□ -1.87
DEPDC1-202ENST00000456315 TRAV8-2A0A0B4J237 113 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 H3BVH4 76 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 J3KRW8 73 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 ORM1P02763 201 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 DAND5Q8N907 189 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 FDCSPQ8NFU4 85 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 FAT2Q9NYQ8 4349 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 MEGF8Q7Z7M0 2845 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 SHISA9B4DS77 424 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 ZNF688P0C7X2 276 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 RPL27AP46776 148 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 FOXC1Q12948 553 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 C2orf66Q6UXQ4 117 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 RASL11BQ9BPW5 248 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 RAB9BQ9NP90 201 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 GAGE2BQ13066 116 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 EBI3Q14213 229 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 GAGE2EQ4V326 116 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 PRR30Q53SZ7 412 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 FAM19A5Q7Z5A7 132 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 CLEC2BQ92478 149 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 SMIM2Q9BVW6 85 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 TMEM14CQ9P0S9 112 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 GAGE2DQ9UEU5 116 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 H7C423 109 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 AVPP01185 164 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 RNASE3P12724 160 aaKnown RBP3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 ADIPOQQ15848 244 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 TEX29Q8N6K0 151 aa3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 BEX4Q9NWD9 120 aaPredicted RBP3.38□□□□□ -1.87
DEPDC1-202ENST00000456315 ZFAND6Q6FIF0 208 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 Q6ZS92 163 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 ZFAND2AQ8N6M9 145 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 ENY2Q9NPA8 101 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 TIMM23O14925 209 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 GNRH2O43555 120 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 NXPH4O95158 308 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 GLRXP35754 106 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 TNFAIP6P98066 277 aaPredicted RBP3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 DSCR8Q96T75 97 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 TRBV6-1A0A0K0K1D8 114 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 BUB3O43684 328 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 VMO1Q7Z5L0 202 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 DNAH10Q8IVF4 4471 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 C20orf173Q96LM9 149 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 ONECUT1Q9UBC0 465 aa3.37□□□□□ -1.87
DEPDC1-202ENST00000456315 A0A0J9YXV3 536 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 CDSNQ15517 529 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 TMEM263Q8WUH6 116 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 CCL17Q92583 94 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 HIGD1AQ9Y241 93 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 CSDC2Q9Y534 153 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 FBN3Q75N90 2809 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 A0A087WVE0 104 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 M0R381 172 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 ENSAO43768 121 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 CFIP05156 583 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 SUMO2P61956 95 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 LINC01620Q4KN68 170 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 TMEM155Q4W5P6 130 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 RNASE13Q5GAN3 156 aaKnown RBP3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 SDIM1Q6ZPB5 146 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 ZFAND3Q9H8U3 227 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 SSUH2Q9Y2M2 353 aa3.36□□□□□ -1.87
DEPDC1-202ENST00000456315 UBE2E1P51965 193 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms