RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TCRAP04437 139 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 PFN1P07737 140 aaKnown RBP3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 STAG3L2P0CL84 134 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 STAG3L3P0CL85 134 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 RNASE3P12724 160 aaKnown RBP3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 GCHFRP30047 84 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 CDC34P49427 236 aaPredicted RBP3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 SEC61BP60468 96 aaKnown RBP3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 UBE2V1Q13404 147 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 WFDC2Q14508 124 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 ZNF506Q5JVG8 444 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 OR2T35Q8NGX2 323 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 KCNS1Q96KK3 526 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 PRADC1Q9BSG0 188 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 SAMD10Q9BYL1 202 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 SH3BGRL3Q9H299 93 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 EPDR1Q9UM22 224 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 ALG5Q9Y673 324 aa3.12□□□□□ -1.91
GTF3C3-208ENST00000455546 IGKV3D-20A0A0C4DH25 116 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 TRBV6-4A0A1B0GX49 114 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 PET100P0DJ07 73 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 ATP6V0CP27449 155 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 DEFA1P59665 94 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 DEFA3P59666 94 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 FLI1Q01543 452 aaPredicted RBP3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 GAGE1Q13065 139 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 GAGE4Q13068 117 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 GAGE5Q13069 117 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 TWIST1Q15672 202 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 LGALSLQ3ZCW2 172 aaPredicted RBP3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 LINC01620Q4KN68 170 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 LINC01556Q5JQF7 62 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 LELP1Q5T871 98 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 SH2D6Q7Z4S9 175 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 DAZ4Q86SG3 579 aaKnown RBP3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 C10orf126Q8N4M7 172 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 C14orf178Q8N769 122 aaPredicted RBP3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 C5orf17Q8NAS9 161 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 ATP6V0E2Q8NHE4 81 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 DNAJC30Q96LL9 226 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 C9orf85Q96MD7 179 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 NDFIP1Q9BT67 221 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 GTSF1LQ9H1H1 148 aa3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 DAZ3Q9NR90 486 aaKnown RBP3.11□□□□□ -1.91
GTF3C3-208ENST00000455546 FAT1Q14517 4588 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 GRIFINA4D1Z8 144 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 GGTLC3B5MD39 225 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 K7EP13 123 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 M0R036 132 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 CRIP1P50238 77 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 FGF8P55075 233 aaPredicted RBP3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 UBE2G2P60604 165 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 RHOHQ15669 191 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 ZNF726P1Q15940 193 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 SMUG1Q53HV7 270 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 RPL7L1Q6DKI1 246 aaKnown RBP3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 ARL6IP6Q8N6S5 226 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 Q8N814 137 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 SUN5Q8TC36 379 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 BAALCQ8WXS3 180 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 ACTR3CQ9C0K3 210 aaPredicted RBP3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 PARLQ9H300 379 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 ARL2-SNX15V9GYD0 113 aa3.1□□□□□ -1.91
GTF3C3-208ENST00000455546 IGLV5-37A0A075B6J1 123 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 TMSB15BA0A087X1C1 80 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 SERTM2A0A1B0GWG4 89 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 FABP5P3A8MUU1 101 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 H3BVH4 76 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 K7EQM0 130 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 CIDEAO60543 219 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 CXorf1O96002 111 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 IFNA7P01567 189 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 ARMS2P0C7Q2 107 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 MGST1P10620 155 aaKnown RBP3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 VPREB1P12018 145 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 S100A4P26447 101 aaKnown RBP3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 SERF2P84101 59 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 SAPCD1Q5SSQ6 148 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 FAM74A4Q5TZK3 123 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 UFSP1Q6NVU6 142 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 CYB561D1Q8N8Q1 229 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 OR2G3Q8NGZ4 309 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 ZC2HC1AQ96GY0 325 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 AQP10Q96PS8 301 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 PSMG3Q9BT73 122 aaPredicted RBP3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 MED28Q9H204 178 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 TMEM167BQ9NRX6 74 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 TNFSF18Q9UNG2 199 aa3.09□□□□□ -1.91
GTF3C3-208ENST00000455546 FXYD6-FXYD2A0A087WZ82 144 aa3.08□□□□□ -1.92
GTF3C3-208ENST00000455546 A0A1W2PRE2 83 aa3.08□□□□□ -1.92
GTF3C3-208ENST00000455546 RNF222A6NCQ9 220 aa3.08□□□□□ -1.92
GTF3C3-208ENST00000455546 FAM74A7A6NL05 159 aa3.08□□□□□ -1.92
GTF3C3-208ENST00000455546 A8MWV9 139 aa3.08□□□□□ -1.92
GTF3C3-208ENST00000455546 B4DEV8 164 aa3.08□□□□□ -1.92
GTF3C3-208ENST00000455546 KRBOX1C9JBD0 128 aa3.08□□□□□ -1.92
GTF3C3-208ENST00000455546 SH2D1AO60880 128 aa3.08□□□□□ -1.92
GTF3C3-208ENST00000455546 MBP02144 154 aa3.08□□□□□ -1.92
GTF3C3-208ENST00000455546 ASIPP42127 132 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms