RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 RNF185Q96GF1 192 aa11.85□□□□□ -0.51
LINC00963-208ENST00000454968 DPH3P1Q9H4G8 78 aa11.85□□□□□ -0.51
LINC00963-208ENST00000454968 TEX48A0A1B0GUV7 120 aa11.84□□□□□ -0.51
LINC00963-208ENST00000454968 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-208ENST00000454968 SSTP61278 116 aa11.84□□□□□ -0.51
LINC00963-208ENST00000454968 SLAQ13239 276 aa11.84□□□□□ -0.51
LINC00963-208ENST00000454968 FAM222AQ5U5X8 452 aa11.84□□□□□ -0.51
LINC00963-208ENST00000454968 ZFP2Q6ZN57 461 aa11.84□□□□□ -0.51
LINC00963-208ENST00000454968 FRZBQ92765 325 aa11.84□□□□□ -0.51
LINC00963-208ENST00000454968 SAMD10Q9BYL1 202 aa11.84□□□□□ -0.51
LINC00963-208ENST00000454968 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
LINC00963-208ENST00000454968 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
LINC00963-208ENST00000454968 CIDEAO60543 219 aa11.83□□□□□ -0.52
LINC00963-208ENST00000454968 RAB4AP20338 218 aa11.83□□□□□ -0.52
LINC00963-208ENST00000454968 C14orf178Q8N769 122 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-208ENST00000454968 EDA2RQ9HAV5 297 aa11.83□□□□□ -0.52
LINC00963-208ENST00000454968 CELA1Q9UNI1 258 aa11.83□□□□□ -0.52
LINC00963-208ENST00000454968 RHODO00212 210 aa11.82□□□□□ -0.52
LINC00963-208ENST00000454968 DEFB4AO15263 64 aa11.82□□□□□ -0.52
LINC00963-208ENST00000454968 SPART-AS1P0CW21 52 aa11.82□□□□□ -0.52
LINC00963-208ENST00000454968 EMP1P54849 157 aa11.82□□□□□ -0.52
LINC00963-208ENST00000454968 SMIM15Q7Z3B0 74 aa11.82□□□□□ -0.52
LINC00963-208ENST00000454968 AMN1Q8IY45 258 aa11.82□□□□□ -0.52
LINC00963-208ENST00000454968 GAGE12BA1L429 117 aa11.81□□□□□ -0.52
LINC00963-208ENST00000454968 GAGE7O76087 117 aa11.81□□□□□ -0.52
LINC00963-208ENST00000454968 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
LINC00963-208ENST00000454968 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
LINC00963-208ENST00000454968 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
LINC00963-208ENST00000454968 RPS10P46783 165 aaKnown RBP11.81□□□□□ -0.52
LINC00963-208ENST00000454968 MRPL18Q9H0U6 180 aaKnown RBP11.81□□□□□ -0.52
LINC00963-208ENST00000454968 MRPL51Q4U2R6 128 aaKnown RBP11.8□□□□□ -0.52
LINC00963-208ENST00000454968 TRAPPC1Q9Y5R8 145 aa11.8□□□□□ -0.52
LINC00963-208ENST00000454968 U3KQK5 164 aa11.8□□□□□ -0.52
LINC00963-208ENST00000454968 A0A087WWL8 130 aa11.79□□□□□ -0.52
LINC00963-208ENST00000454968 A0A0J9YWU9 116 aa11.79□□□□□ -0.52
LINC00963-208ENST00000454968 APCSP02743 223 aa11.79□□□□□ -0.52
LINC00963-208ENST00000454968 RAB4BP61018 213 aa11.79□□□□□ -0.52
LINC00963-208ENST00000454968 TRGC2P03986 189 aa11.78□□□□□ -0.52
LINC00963-208ENST00000454968 SMIM17P0DL12 118 aa11.78□□□□□ -0.52
LINC00963-208ENST00000454968 FABP9Q0Z7S8 132 aa11.78□□□□□ -0.52
LINC00963-208ENST00000454968 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
LINC00963-208ENST00000454968 MRAP2Q96G30 205 aa11.78□□□□□ -0.52
LINC00963-208ENST00000454968 ZNF479Q96JC4 524 aa11.78□□□□□ -0.52
LINC00963-208ENST00000454968 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.52
LINC00963-208ENST00000454968 IGHV3-53P01767 116 aa11.77□□□□□ -0.52
LINC00963-208ENST00000454968 PPBPP02775 128 aa11.77□□□□□ -0.52
LINC00963-208ENST00000454968 DEFB130BP0DP73 79 aa11.77□□□□□ -0.53
LINC00963-208ENST00000454968 DEFB130AP0DP74 79 aa11.77□□□□□ -0.53
LINC00963-208ENST00000454968 FHL2Q14192 279 aa11.77□□□□□ -0.53
LINC00963-208ENST00000454968 C12orf74Q32Q52 190 aa11.77□□□□□ -0.53
LINC00963-208ENST00000454968 M0QY20 66 aa11.76□□□□□ -0.53
LINC00963-208ENST00000454968 GATA1P15976 413 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-208ENST00000454968 DAD1P61803 113 aa11.76□□□□□ -0.53
LINC00963-208ENST00000454968 FAM74A4Q5TZK3 123 aa11.76□□□□□ -0.53
LINC00963-208ENST00000454968 SUMO4Q6EEV6 95 aa11.76□□□□□ -0.53
LINC00963-208ENST00000454968 Q6ZSN1 163 aa11.76□□□□□ -0.53
LINC00963-208ENST00000454968 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-208ENST00000454968 ALKBH7Q9BT30 221 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-208ENST00000454968 GAS8-AS1O95177 125 aa11.75□□□□□ -0.53
LINC00963-208ENST00000454968 ORMDL3Q8N138 153 aa11.75□□□□□ -0.53
LINC00963-208ENST00000454968 NRACQ8N912 160 aa11.75□□□□□ -0.53
LINC00963-208ENST00000454968 LAMTOR2Q9Y2Q5 125 aa11.75□□□□□ -0.53
LINC00963-208ENST00000454968 DNAH7Q8WXX0 4024 aa11.74□□□□□ -0.53
LINC00963-208ENST00000454968 D6R8Y8 96 aa11.74□□□□□ -0.53
LINC00963-208ENST00000454968 KIAA1644Q3SXP7 199 aa11.74□□□□□ -0.53
LINC00963-208ENST00000454968 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
LINC00963-208ENST00000454968 TRBV6-5A0A0K0K1A5 114 aa11.73□□□□□ -0.53
LINC00963-208ENST00000454968 TRBV6-4A0A1B0GX49 114 aa11.73□□□□□ -0.53
LINC00963-208ENST00000454968 PRSS47A8MTI9 375 aa11.73□□□□□ -0.53
LINC00963-208ENST00000454968 ATP5G1P05496 136 aa11.73□□□□□ -0.53
LINC00963-208ENST00000454968 MGPP08493 103 aa11.73□□□□□ -0.53
LINC00963-208ENST00000454968 HOXA5P20719 270 aa11.73□□□□□ -0.53
LINC00963-208ENST00000454968 CKS2P33552 79 aa11.73□□□□□ -0.53
LINC00963-208ENST00000454968 ZNF56Q15929 161 aa11.73□□□□□ -0.53
LINC00963-208ENST00000454968 C11orf45Q8TAV5 145 aa11.72□□□□□ -0.53
LINC00963-208ENST00000454968 DYNC2H1Q8NCM8 4307 aaKnown RBP11.72□□□□□ -0.53
LINC00963-208ENST00000454968 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.53
LINC00963-208ENST00000454968 TRBV10-1A0A0K0K1A3 114 aa11.71□□□□□ -0.53
LINC00963-208ENST00000454968 SMKR1H3BMG3 65 aa11.71□□□□□ -0.53
LINC00963-208ENST00000454968 H7C1H1 209 aa11.71□□□□□ -0.53
LINC00963-208ENST00000454968 PPP1R17O96001 155 aa11.71□□□□□ -0.53
LINC00963-208ENST00000454968 SLC25A29Q8N8R3 303 aa11.71□□□□□ -0.53
LINC00963-208ENST00000454968 F5H697 171 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST1H2BKO60814 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 NCR2O95944 276 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 NPYP01303 97 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST1H2BJP06899 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST1H2BOP23527 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 SRIP30626 198 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST1H2BBP33778 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST1H2BDP58876 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST1H2BCP62807 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST2H2BEQ16778 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST1H2BHQ93079 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 PRELID3AQ96N28 172 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST1H2BNQ99877 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 HIST1H2BMQ99879 126 aa11.7□□□□□ -0.54
LINC00963-208ENST00000454968 C1orf196B1AJZ1 125 aa11.69□□□□□ -0.54
LINC00963-208ENST00000454968 K7EQD1 137 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms