RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 SPINK4O60575 86 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 IGKV2D-40P01614 121 aaPredicted RBP6.79□□□□□ -1.32
LINC01238-204ENST00000451070 CRISP2P16562 243 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 RNASE4P34096 147 aaKnown RBP6.79□□□□□ -1.32
LINC01238-204ENST00000451070 TCL1AP56279 114 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 HBG1P69891 147 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 HBG2P69892 147 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 PDZD11Q5EBL8 140 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 Q6ZRN7 208 aaPredicted RBP6.79□□□□□ -1.32
LINC01238-204ENST00000451070 C9orf47Q6ZRZ4 202 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 Q8N1X5 172 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 STPG4Q8N801 248 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 NHLRC2Q8NBF2 726 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 BLNKQ8WV28 456 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 FAM167A-AS1Q96KT0 104 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 VGLL1Q99990 258 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 SLC25A2Q9BXI2 301 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 NPCDR1Q9BY65 106 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 TP53TG3Q9ULZ0 132 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 FUT9Q9Y231 359 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 TIMM9Q9Y5J7 89 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 URGCP-MRPS24S4R325 110 aa6.79□□□□□ -1.32
LINC01238-204ENST00000451070 FBLL1A6NHQ2 334 aaKnown RBP6.78□□□□□ -1.32
LINC01238-204ENST00000451070 C9JQL5 133 aa6.78□□□□□ -1.32
LINC01238-204ENST00000451070 MPDU1O75352 247 aa6.78□□□□□ -1.32
LINC01238-204ENST00000451070 LINC00315P59091 139 aa6.78□□□□□ -1.32
LINC01238-204ENST00000451070 ICAM4Q14773 271 aa6.78□□□□□ -1.32
LINC01238-204ENST00000451070 ACOT6Q3I5F7 207 aaPredicted RBP6.78□□□□□ -1.32
LINC01238-204ENST00000451070 MIR17HGQ75NE6 70 aa6.78□□□□□ -1.32
LINC01238-204ENST00000451070 CYTL1Q9NRR1 136 aa6.78□□□□□ -1.32
LINC01238-204ENST00000451070 ZNF492Q9P255 531 aa6.78□□□□□ -1.32
LINC01238-204ENST00000451070 TRAV34A0A0B4J273 112 aa6.77□□□□□ -1.33
LINC01238-204ENST00000451070 F8WDY8 70 aa6.77□□□□□ -1.33
LINC01238-204ENST00000451070 SIVA1O15304 175 aa6.77□□□□□ -1.33
LINC01238-204ENST00000451070 PDE6DO43924 150 aa6.77□□□□□ -1.33
LINC01238-204ENST00000451070 GPX1P07203 203 aa6.77□□□□□ -1.33
LINC01238-204ENST00000451070 CXCL1P09341 107 aa6.77□□□□□ -1.33
LINC01238-204ENST00000451070 CYCSP99999 105 aaKnown RBP6.77□□□□□ -1.33
LINC01238-204ENST00000451070 VAMP3Q15836 100 aa6.77□□□□□ -1.33
LINC01238-204ENST00000451070 IBA57Q5T440 356 aaKnown RBP6.77□□□□□ -1.33
LINC01238-204ENST00000451070 PSMG3Q9BT73 122 aaPredicted RBP6.77□□□□□ -1.33
LINC01238-204ENST00000451070 CTDSP1Q9GZU7 261 aa6.77□□□□□ -1.33
LINC01238-204ENST00000451070 AAMDCQ9H7C9 122 aa6.77□□□□□ -1.33
LINC01238-204ENST00000451070 IGHV1OR15-1A0A075B7D0 117 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 PAX4O43316 350 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 IGHV3-53P01767 116 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 BATFQ16520 125 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 TMEM78Q5T7P6 136 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 FER1L6-AS1Q8NA97 138 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 OR5C1Q8NGR4 320 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 FXYD5Q96DB9 178 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 VAMP8Q9BV40 100 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 SCRT2Q9NQ03 307 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 MRPL16Q9NX20 251 aaKnown RBP6.76□□□□□ -1.33
LINC01238-204ENST00000451070 FAT1Q14517 4588 aa6.76□□□□□ -1.33
LINC01238-204ENST00000451070 H0YIZ8 118 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 NXPH4O95158 308 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 ZNF138P52744 262 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 PNRC1Q12796 327 aaPredicted RBP6.75□□□□□ -1.33
LINC01238-204ENST00000451070 FHL2Q14192 279 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 Q8TAT8 98 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 TMED6Q8WW62 240 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 BTF3L4Q96K17 158 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 PAXXQ9BUH6 204 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 GEMIN7Q9H840 131 aaKnown RBP6.75□□□□□ -1.33
LINC01238-204ENST00000451070 PRO0255Q9UI72 69 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 ICOSQ9Y6W8 199 aa6.75□□□□□ -1.33
LINC01238-204ENST00000451070 E5RGE8 158 aa6.74□□□□□ -1.33
LINC01238-204ENST00000451070 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
LINC01238-204ENST00000451070 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
LINC01238-204ENST00000451070 LYPD5Q6UWN5 251 aa6.74□□□□□ -1.33
LINC01238-204ENST00000451070 NEGR1Q7Z3B1 354 aa6.74□□□□□ -1.33
LINC01238-204ENST00000451070 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
LINC01238-204ENST00000451070 OR10G4Q8NGN3 311 aa6.74□□□□□ -1.33
LINC01238-204ENST00000451070 TVP23CQ96ET8 276 aa6.74□□□□□ -1.33
LINC01238-204ENST00000451070 C8orf49Q96NF6 230 aa6.74□□□□□ -1.33
LINC01238-204ENST00000451070 AQP10Q96PS8 301 aa6.74□□□□□ -1.33
LINC01238-204ENST00000451070 MRPL32Q9BYC8 188 aaKnown RBP6.74□□□□□ -1.33
LINC01238-204ENST00000451070 WDR61Q9GZS3 305 aaKnown RBP6.74□□□□□ -1.33
LINC01238-204ENST00000451070 HHLA3Q9XRX5 114 aa6.74□□□□□ -1.33
LINC01238-204ENST00000451070 K7EQM0 130 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 CTRLP40313 264 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 ZNF415Q09FC8 603 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 GAGE5Q13069 117 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 GAGE6Q13070 117 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 ZNF266Q14584 549 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 MRPL23Q16540 153 aaKnown RBP6.73□□□□□ -1.33
LINC01238-204ENST00000451070 LRRC37A5PQ49AS3 106 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 MUC21Q5SSG8 566 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 DAZAP1Q96EP5 407 aaKnown RBP6.73□□□□□ -1.33
LINC01238-204ENST00000451070 NMES1Q9C002 83 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 MDFICQ9P1T7 246 aa6.73□□□□□ -1.33
LINC01238-204ENST00000451070 RBAKDNA6NC62 111 aa6.72□□□□□ -1.33
LINC01238-204ENST00000451070 RPL32P62910 135 aaKnown RBP6.72□□□□□ -1.33
LINC01238-204ENST00000451070 Q6AWC8 147 aa6.72□□□□□ -1.33
LINC01238-204ENST00000451070 GTF2H5Q6ZYL4 71 aa6.72□□□□□ -1.33
LINC01238-204ENST00000451070 LYPD1Q8N2G4 141 aa6.72□□□□□ -1.33
LINC01238-204ENST00000451070 PTH2Q96A98 100 aa6.72□□□□□ -1.33
LINC01238-204ENST00000451070 KCNIP2Q9NS61 270 aa6.72□□□□□ -1.33
LINC01238-204ENST00000451070 PSG8Q9UQ74 426 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms