RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 TRAV2A0A0B4J234 112 aa16.14■□□□□ 0.17
NPAS1-202ENST00000449844 IGKV3-20P01619 116 aa16.14■□□□□ 0.17
NPAS1-202ENST00000449844 RPL32P62910 135 aaKnown RBP16.14■□□□□ 0.17
NPAS1-202ENST00000449844 C11orf44Q8N8P7 122 aa16.14■□□□□ 0.17
NPAS1-202ENST00000449844 HIVEP2P31629 2446 aa16.14■□□□□ 0.17
NPAS1-202ENST00000449844 IGHV1OR15-1A0A075B7D0 117 aa16.14■□□□□ 0.17
NPAS1-202ENST00000449844 TOMM6Q96B49 74 aa16.14■□□□□ 0.17
NPAS1-202ENST00000449844 HHLA3Q9XRX5 114 aa16.14■□□□□ 0.17
NPAS1-202ENST00000449844 TRAV12-2A0A075B6T6 113 aa16.13■□□□□ 0.17
NPAS1-202ENST00000449844 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.13■□□□□ 0.17
NPAS1-202ENST00000449844 CD28P10747 220 aa16.13■□□□□ 0.17
NPAS1-202ENST00000449844 AMTNQ6UX39 209 aa16.13■□□□□ 0.17
NPAS1-202ENST00000449844 JMJD8Q96S16 334 aa16.13■□□□□ 0.17
NPAS1-202ENST00000449844 A0A087WX48 190 aa16.12■□□□□ 0.17
NPAS1-202ENST00000449844 SPINK13Q1W4C9 94 aa16.12■□□□□ 0.17
NPAS1-202ENST00000449844 MTORP42345 2549 aa16.12■□□□□ 0.17
NPAS1-202ENST00000449844 SYT8Q8NBV8 401 aa16.12■□□□□ 0.17
NPAS1-202ENST00000449844 MUC4Q99102 2169 aa16.12■□□□□ 0.17
NPAS1-202ENST00000449844 TRAV12-1A0A0B4J245 112 aa16.11■□□□□ 0.17
NPAS1-202ENST00000449844 A0A1W2PRX2 142 aa16.11■□□□□ 0.17
NPAS1-202ENST00000449844 NMUP48645 174 aa16.11■□□□□ 0.17
NPAS1-202ENST00000449844 DLX4Q92988 240 aaPredicted RBP16.11■□□□□ 0.17
NPAS1-202ENST00000449844 NPSP0C0P6 89 aa16.11■□□□□ 0.17
NPAS1-202ENST00000449844 Q8N1Y9 231 aa16.11■□□□□ 0.17
NPAS1-202ENST00000449844 SCGB3A1Q96QR1 104 aa16.1■□□□□ 0.17
NPAS1-202ENST00000449844 CSTL1Q9H114 145 aa16.1■□□□□ 0.17
NPAS1-202ENST00000449844 JPT2Q9H910 190 aa16.1■□□□□ 0.17
NPAS1-202ENST00000449844 NOTCH2Q04721 2471 aa16.1■□□□□ 0.17
NPAS1-202ENST00000449844 A8MTW9 85 aa16.09■□□□□ 0.17
NPAS1-202ENST00000449844 TMEM97Q5BJF2 176 aa16.09■□□□□ 0.17
NPAS1-202ENST00000449844 SUMO4Q6EEV6 95 aa16.09■□□□□ 0.17
NPAS1-202ENST00000449844 MRPL35Q9NZE8 188 aaKnown RBP16.09■□□□□ 0.17
NPAS1-202ENST00000449844 MDFICQ9P1T7 246 aa16.09■□□□□ 0.17
NPAS1-202ENST00000449844 RAX2Q96IS3 184 aa16.09■□□□□ 0.17
NPAS1-202ENST00000449844 CITED2Q99967 270 aaPredicted RBP16.09■□□□□ 0.17
NPAS1-202ENST00000449844 TRGV11A0A075B6L2 103 aa16.08■□□□□ 0.16
NPAS1-202ENST00000449844 NDUFA7O95182 113 aa16.08■□□□□ 0.16
NPAS1-202ENST00000449844 TCTAP57738 103 aa16.08■□□□□ 0.16
NPAS1-202ENST00000449844 SEC11AP67812 179 aa16.08■□□□□ 0.16
NPAS1-202ENST00000449844 PCP2Q8IVA1 136 aa16.08■□□□□ 0.16
NPAS1-202ENST00000449844 TSSC4Q9Y5U2 329 aaPredicted RBP16.08■□□□□ 0.16
NPAS1-202ENST00000449844 CUBNO60494 3623 aa16.08■□□□□ 0.16
NPAS1-202ENST00000449844 LINC01549A6NIU2 74 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 HLA-DRB4P13762 266 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 PLNP26678 52 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 C2orf66Q6UXQ4 117 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 HLA-DRB4X5D2U9 266 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 A0A087WWL8 130 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 H7C1H1 209 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 TAX1BP3O14907 124 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 DEFB131AP59861 70 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 HSD52Q0P140 79 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 ZC2HC1BQ5TFG8 222 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 DYNLRB2Q8TF09 96 aa16.07■□□□□ 0.16
NPAS1-202ENST00000449844 INAFM1C9JVW0 142 aa16.06■□□□□ 0.16
NPAS1-202ENST00000449844 POLR2KP53803 58 aaKnown RBP16.06■□□□□ 0.16
NPAS1-202ENST00000449844 Q6ZVH6 145 aa16.06■□□□□ 0.16
NPAS1-202ENST00000449844 TRBV6-5A0A0K0K1A5 114 aa16.06■□□□□ 0.16
NPAS1-202ENST00000449844 KNCNA6PVL3 124 aa16.06■□□□□ 0.16
NPAS1-202ENST00000449844 F5H697 171 aa16.06■□□□□ 0.16
NPAS1-202ENST00000449844 FHL3Q13643 280 aa16.06■□□□□ 0.16
NPAS1-202ENST00000449844 F8VRH5 84 aa16.05■□□□□ 0.16
NPAS1-202ENST00000449844 CCL24O00175 119 aa16.05■□□□□ 0.16
NPAS1-202ENST00000449844 TMEM61Q8N0U2 210 aa16.05■□□□□ 0.16
NPAS1-202ENST00000449844 IGKV2D-26A0A0A0MRZ7 120 aa16.04■□□□□ 0.16
NPAS1-202ENST00000449844 H3BMM0 161 aa16.04■□□□□ 0.16
NPAS1-202ENST00000449844 VCYO14598 125 aa16.04■□□□□ 0.16
NPAS1-202ENST00000449844 ERASQ7Z444 233 aa16.04■□□□□ 0.16
NPAS1-202ENST00000449844 GTSCR1Q86UQ5 136 aa16.04■□□□□ 0.16
NPAS1-202ENST00000449844 NEXN-AS1Q8NBZ9 246 aa16.04■□□□□ 0.16
NPAS1-202ENST00000449844 OTOGQ6ZRI0 2925 aa16.03■□□□□ 0.16
NPAS1-202ENST00000449844 CRYGDP07320 174 aa16.03■□□□□ 0.16
NPAS1-202ENST00000449844 HIGD1BQ9P298 99 aa16.03■□□□□ 0.16
NPAS1-202ENST00000449844 CHTOPQ9Y3Y2 248 aaKnown RBP16.03■□□□□ 0.16
NPAS1-202ENST00000449844 CYSLTR1Q9Y271 337 aa16.02■□□□□ 0.16
NPAS1-202ENST00000449844 FOSL1P15407 271 aa16.02■□□□□ 0.15
NPAS1-202ENST00000449844 KIR2DL4Q99706 377 aa16.02■□□□□ 0.15
NPAS1-202ENST00000449844 CBY3A6NI87 242 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 UBE2V1Q13404 147 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 DEFB114Q30KQ6 69 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 FAM74A4Q5TZK3 123 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 BAALCQ8WXS3 180 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 ZNF256Q9Y2P7 627 aaPredicted RBP16.01■□□□□ 0.15
NPAS1-202ENST00000449844 NF1P21359 2839 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 TRBV27A0A0K0K1C4 114 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 PROK1P58294 105 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 ZFP2Q6ZN57 461 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 NEGR1Q7Z3B1 354 aa16.01■□□□□ 0.15
NPAS1-202ENST00000449844 AGRNO00468 2067 aa16■□□□□ 0.15
NPAS1-202ENST00000449844 A6NDN8 102 aa16■□□□□ 0.15
NPAS1-202ENST00000449844 SDHAF1A6NFY7 115 aa16■□□□□ 0.15
NPAS1-202ENST00000449844 RBMY1A1P0DJD3 496 aaKnown RBP16■□□□□ 0.15
NPAS1-202ENST00000449844 RBMY1CP0DJD4 496 aa16■□□□□ 0.15
NPAS1-202ENST00000449844 RBMY1FQ15415 496 aaKnown RBP16■□□□□ 0.15
NPAS1-202ENST00000449844 ZNF56Q15929 161 aa16■□□□□ 0.15
NPAS1-202ENST00000449844 ZNF124Q15973 351 aa16■□□□□ 0.15
NPAS1-202ENST00000449844 M0QY20 66 aa15.99■□□□□ 0.15
NPAS1-202ENST00000449844 PTTG1IPP53801 180 aa15.99■□□□□ 0.15
NPAS1-202ENST00000449844 ZNF876PQ49A33 203 aa15.99■□□□□ 0.15
NPAS1-202ENST00000449844 MAP6D1Q9H9H5 199 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms