RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 MGPP08493 103 aa10.43□□□□□ -0.74
TNF-208ENST00000449264 RASL11AQ6T310 242 aa10.43□□□□□ -0.74
TNF-208ENST00000449264 SAMD10Q9BYL1 202 aa10.43□□□□□ -0.74
TNF-208ENST00000449264 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
TNF-208ENST00000449264 A8MWV9 139 aa10.42□□□□□ -0.74
TNF-208ENST00000449264 SPART-AS1P0CW21 52 aa10.42□□□□□ -0.74
TNF-208ENST00000449264 PIK3CD-AS1Q5SR53 167 aa10.42□□□□□ -0.74
TNF-208ENST00000449264 CFAP126Q5VTH2 177 aa10.42□□□□□ -0.74
TNF-208ENST00000449264 TMEM136Q6ZRR5 245 aa10.42□□□□□ -0.74
TNF-208ENST00000449264 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
TNF-208ENST00000449264 RAB5AP20339 215 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 RPS10P46783 165 aaKnown RBP10.41□□□□□ -0.74
TNF-208ENST00000449264 DAD1P61803 113 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 AMN1Q8IY45 258 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 OR4C5Q8NGB2 326 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 FRZBQ92765 325 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 DPH3P1Q9H4G8 78 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 ZNF56Q15929 161 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 COX19Q49B96 90 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 LINC00612Q8N6U2 182 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 POM121L12Q8N7R1 296 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 NDUFAF3Q9BU61 184 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 GNB1LQ9BYB4 327 aa10.41□□□□□ -0.74
TNF-208ENST00000449264 TRAV4A0A0B4J268 109 aa10.4□□□□□ -0.74
TNF-208ENST00000449264 TEX48A0A1B0GUV7 120 aa10.4□□□□□ -0.74
TNF-208ENST00000449264 RS1O15537 224 aa10.4□□□□□ -0.74
TNF-208ENST00000449264 HLA-DQA1P01909 254 aa10.4□□□□□ -0.74
TNF-208ENST00000449264 CRYGDP07320 174 aa10.4□□□□□ -0.74
TNF-208ENST00000449264 NHLRC4P0CG21 123 aaPredicted RBP10.4□□□□□ -0.74
TNF-208ENST00000449264 SLAQ13239 276 aa10.4□□□□□ -0.74
TNF-208ENST00000449264 GATD1Q8NB37 220 aa10.4□□□□□ -0.74
TNF-208ENST00000449264 ZNF479Q96JC4 524 aa10.4□□□□□ -0.74
TNF-208ENST00000449264 TRAPPC1Q9Y5R8 145 aa10.4□□□□□ -0.74
TNF-208ENST00000449264 F5H697 171 aa10.39□□□□□ -0.75
TNF-208ENST00000449264 MT-ND6P03923 174 aa10.39□□□□□ -0.75
TNF-208ENST00000449264 MRPL18Q9H0U6 180 aaKnown RBP10.39□□□□□ -0.75
TNF-208ENST00000449264 KIF25-AS1Q9Y6Z4 181 aa10.39□□□□□ -0.75
TNF-208ENST00000449264 FAM104BQ5XKR9 115 aa10.38□□□□□ -0.75
TNF-208ENST00000449264 TRAV26-2A0A0B4J265 109 aa10.38□□□□□ -0.75
TNF-208ENST00000449264 RHODO00212 210 aa10.38□□□□□ -0.75
TNF-208ENST00000449264 APCSP02743 223 aa10.38□□□□□ -0.75
TNF-208ENST00000449264 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
TNF-208ENST00000449264 KIAA1644Q3SXP7 199 aa10.38□□□□□ -0.75
TNF-208ENST00000449264 C11orf45Q8TAV5 145 aa10.38□□□□□ -0.75
TNF-208ENST00000449264 RNF185Q96GF1 192 aa10.38□□□□□ -0.75
TNF-208ENST00000449264 NCR2O95944 276 aa10.37□□□□□ -0.75
TNF-208ENST00000449264 RAB4AP20338 218 aa10.37□□□□□ -0.75
TNF-208ENST00000449264 LINC00315P59091 139 aa10.37□□□□□ -0.75
TNF-208ENST00000449264 NANOS2P60321 138 aaKnown RBP10.37□□□□□ -0.75
TNF-208ENST00000449264 C12orf74Q32Q52 190 aa10.37□□□□□ -0.75
TNF-208ENST00000449264 MRPL51Q4U2R6 128 aaKnown RBP10.37□□□□□ -0.75
TNF-208ENST00000449264 UFSP1Q6NVU6 142 aa10.37□□□□□ -0.75
TNF-208ENST00000449264 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
TNF-208ENST00000449264 TRGC2P03986 189 aa10.36□□□□□ -0.75
TNF-208ENST00000449264 HTN3P15516 51 aa10.36□□□□□ -0.75
TNF-208ENST00000449264 SUMO4Q6EEV6 95 aa10.36□□□□□ -0.75
TNF-208ENST00000449264 C18orf15Q96N68 181 aa10.36□□□□□ -0.75
TNF-208ENST00000449264 TRGV4A0A0C4DH28 118 aa10.35□□□□□ -0.75
TNF-208ENST00000449264 D6R8Y8 96 aa10.35□□□□□ -0.75
TNF-208ENST00000449264 ATP5G1P05496 136 aa10.35□□□□□ -0.75
TNF-208ENST00000449264 ZFP2Q6ZN57 461 aa10.35□□□□□ -0.75
TNF-208ENST00000449264 Q6ZTC4 211 aa10.35□□□□□ -0.75
TNF-208ENST00000449264 U3KQK5 164 aa10.35□□□□□ -0.75
TNF-208ENST00000449264 CKS2P33552 79 aa10.34□□□□□ -0.75
TNF-208ENST00000449264 Q6ZSN1 163 aa10.34□□□□□ -0.75
TNF-208ENST00000449264 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
TNF-208ENST00000449264 HOXA5P20719 270 aa10.34□□□□□ -0.75
TNF-208ENST00000449264 F5H768 121 aa10.33□□□□□ -0.76
TNF-208ENST00000449264 GATA1P15976 413 aaPredicted RBP10.33□□□□□ -0.76
TNF-208ENST00000449264 FHL2Q14192 279 aa10.33□□□□□ -0.76
TNF-208ENST00000449264 ORMDL3Q8N138 153 aa10.33□□□□□ -0.76
TNF-208ENST00000449264 MRAP2Q96G30 205 aa10.33□□□□□ -0.76
TNF-208ENST00000449264 TGP01266 2768 aa10.33□□□□□ -0.76
TNF-208ENST00000449264 P0DMU3 169 aa10.32□□□□□ -0.76
TNF-208ENST00000449264 FAM231AP0DMU4 169 aa10.32□□□□□ -0.76
TNF-208ENST00000449264 FAM231CP0DMU5 169 aa10.32□□□□□ -0.76
TNF-208ENST00000449264 K7EQD1 137 aa10.31□□□□□ -0.76
TNF-208ENST00000449264 CIDEAO60543 219 aa10.31□□□□□ -0.76
TNF-208ENST00000449264 SRIP30626 198 aa10.31□□□□□ -0.76
TNF-208ENST00000449264 SLC25A29Q8N8R3 303 aa10.31□□□□□ -0.76
TNF-208ENST00000449264 RPL39LQ96EH5 51 aaKnown RBP10.31□□□□□ -0.76
TNF-208ENST00000449264 PRELID3AQ96N28 172 aa10.31□□□□□ -0.76
TNF-208ENST00000449264 EDA2RQ9HAV5 297 aa10.31□□□□□ -0.76
TNF-208ENST00000449264 H7C1H1 209 aa10.31□□□□□ -0.76
TNF-208ENST00000449264 M0QY20 66 aa10.31□□□□□ -0.76
TNF-208ENST00000449264 PPBPP02775 128 aa10.3□□□□□ -0.76
TNF-208ENST00000449264 OR10J3Q5JRS4 329 aa10.3□□□□□ -0.76
TNF-208ENST00000449264 HHLA3Q9XRX5 114 aa10.3□□□□□ -0.76
TNF-208ENST00000449264 A0A0J9YY99 117 aa10.29□□□□□ -0.76
TNF-208ENST00000449264 PHOX2AO14813 284 aa10.29□□□□□ -0.76
TNF-208ENST00000449264 NPYP01303 97 aa10.29□□□□□ -0.76
TNF-208ENST00000449264 RHOHQ15669 191 aa10.29□□□□□ -0.76
TNF-208ENST00000449264 ALKBH7Q9BT30 221 aaPredicted RBP10.29□□□□□ -0.76
TNF-208ENST00000449264 Q9UF83 564 aa10.29□□□□□ -0.76
TNF-208ENST00000449264 TRAV26-1A0A087WT03 109 aa10.28□□□□□ -0.76
TNF-208ENST00000449264 DEFB131BA0A096LNP1 70 aa10.28□□□□□ -0.76
TNF-208ENST00000449264 TRBV6-4A0A1B0GX49 114 aa10.28□□□□□ -0.76
TNF-208ENST00000449264 TNFRSF6BO95407 300 aa10.28□□□□□ -0.76
TNF-208ENST00000449264 NRACQ8N912 160 aa10.28□□□□□ -0.76
TNF-208ENST00000449264 PRO0255Q9UI72 69 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms