RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 RS1O15537 224 aa13.74□□□□□ -0.21
RPS28-202ENST00000449223 CFAP126Q5VTH2 177 aa13.74□□□□□ -0.21
RPS28-202ENST00000449223 AMN1Q8IY45 258 aa13.74□□□□□ -0.21
RPS28-202ENST00000449223 C14orf178Q8N769 122 aaPredicted RBP13.74□□□□□ -0.21
RPS28-202ENST00000449223 FRZBQ92765 325 aa13.74□□□□□ -0.21
RPS28-202ENST00000449223 RNF185Q96GF1 192 aa13.74□□□□□ -0.21
RPS28-202ENST00000449223 DKK2Q9UBU2 259 aa13.74□□□□□ -0.21
RPS28-202ENST00000449223 TEX48A0A1B0GUV7 120 aa13.74□□□□□ -0.21
RPS28-202ENST00000449223 TRGC2P03986 189 aa13.74□□□□□ -0.21
RPS28-202ENST00000449223 ZFP2Q6ZN57 461 aa13.74□□□□□ -0.21
RPS28-202ENST00000449223 TRAV4A0A0B4J268 109 aa13.73□□□□□ -0.21
RPS28-202ENST00000449223 APCSP02743 223 aa13.73□□□□□ -0.21
RPS28-202ENST00000449223 RAB4AP20338 218 aa13.73□□□□□ -0.21
RPS28-202ENST00000449223 EMP1P54849 157 aa13.73□□□□□ -0.21
RPS28-202ENST00000449223 DEFA6Q01524 100 aa13.73□□□□□ -0.21
RPS28-202ENST00000449223 FABP9Q0Z7S8 132 aa13.73□□□□□ -0.21
RPS28-202ENST00000449223 RHODO00212 210 aa13.72□□□□□ -0.21
RPS28-202ENST00000449223 CIDEAO60543 219 aa13.72□□□□□ -0.21
RPS28-202ENST00000449223 SMIM17P0DL12 118 aa13.72□□□□□ -0.21
RPS28-202ENST00000449223 FAM222AQ5U5X8 452 aa13.72□□□□□ -0.21
RPS28-202ENST00000449223 SAMD10Q9BYL1 202 aa13.72□□□□□ -0.21
RPS28-202ENST00000449223 ZMAT4Q9H898 229 aa13.71□□□□□ -0.21
RPS28-202ENST00000449223 A0A087WWL8 130 aa13.7□□□□□ -0.22
RPS28-202ENST00000449223 DEFB4AO15263 64 aa13.7□□□□□ -0.22
RPS28-202ENST00000449223 MRPL51Q4U2R6 128 aaKnown RBP13.7□□□□□ -0.22
RPS28-202ENST00000449223 EDA2RQ9HAV5 297 aa13.7□□□□□ -0.22
RPS28-202ENST00000449223 U3KQK5 164 aa13.7□□□□□ -0.22
RPS28-202ENST00000449223 COL7A1Q02388 2944 aa13.7□□□□□ -0.22
RPS28-202ENST00000449223 GAGE12BA1L429 117 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 GAGE7O76087 117 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 PPBPP02775 128 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 GAGE12FP0CL80 117 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 GAGE12GP0CL81 117 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 GAGE12IP0CL82 117 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 SPART-AS1P0CW21 52 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 MRAP2Q96G30 205 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 DNAH9Q9NYC9 4486 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 HUWE1Q7Z6Z7 4374 aaKnown RBP13.69□□□□□ -0.22
RPS28-202ENST00000449223 TRGV2A0A075B6R0 118 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 OR4C5Q8NGB2 326 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 CELA1Q9UNI1 258 aa13.69□□□□□ -0.22
RPS28-202ENST00000449223 NHLRC4P0CG21 123 aaPredicted RBP13.68□□□□□ -0.22
RPS28-202ENST00000449223 FAM74A4Q5TZK3 123 aa13.68□□□□□ -0.22
RPS28-202ENST00000449223 ORMDL3Q8N138 153 aa13.67□□□□□ -0.22
RPS28-202ENST00000449223 ZNF479Q96JC4 524 aa13.67□□□□□ -0.22
RPS28-202ENST00000449223 PRKDCP78527 4128 aaKnown RBP13.66□□□□□ -0.22
RPS28-202ENST00000449223 C1orf196B1AJZ1 125 aa13.66□□□□□ -0.22
RPS28-202ENST00000449223 DEFB130BP0DP73 79 aa13.66□□□□□ -0.22
RPS28-202ENST00000449223 DEFB130AP0DP74 79 aa13.66□□□□□ -0.22
RPS28-202ENST00000449223 ALKBH7Q9BT30 221 aaPredicted RBP13.66□□□□□ -0.22
RPS28-202ENST00000449223 LAMTOR2Q9Y2Q5 125 aa13.66□□□□□ -0.22
RPS28-202ENST00000449223 A0A0J9YWU9 116 aa13.65□□□□□ -0.22
RPS28-202ENST00000449223 D6R8Y8 96 aa13.65□□□□□ -0.22
RPS28-202ENST00000449223 IGHV3-53P01767 116 aa13.65□□□□□ -0.22
RPS28-202ENST00000449223 MGPP08493 103 aa13.65□□□□□ -0.22
RPS28-202ENST00000449223 CKS2P33552 79 aa13.65□□□□□ -0.22
RPS28-202ENST00000449223 KIAA1644Q3SXP7 199 aa13.65□□□□□ -0.22
RPS28-202ENST00000449223 DAD1P61803 113 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 ZNF56Q15929 161 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 SUMO4Q6EEV6 95 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 M0QY20 66 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST1H2BKO60814 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST1H2BJP06899 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST1H2BOP23527 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST1H2BBP33778 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST1H2BDP58876 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST1H2BCP62807 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST2H2BEQ16778 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST1H2BHQ93079 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST1H2BNQ99877 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 HIST1H2BMQ99879 126 aa13.64□□□□□ -0.23
RPS28-202ENST00000449223 TRAV26-2A0A0B4J265 109 aa13.63□□□□□ -0.23
RPS28-202ENST00000449223 H7C1H1 209 aa13.63□□□□□ -0.23
RPS28-202ENST00000449223 PPP1R17O96001 155 aa13.63□□□□□ -0.23
RPS28-202ENST00000449223 SRIP30626 198 aa13.63□□□□□ -0.23
RPS28-202ENST00000449223 NRACQ8N912 160 aa13.63□□□□□ -0.23
RPS28-202ENST00000449223 STAB2Q8WWQ8 2551 aa13.62□□□□□ -0.23
RPS28-202ENST00000449223 F5H697 171 aa13.62□□□□□ -0.23
RPS28-202ENST00000449223 GAS8-AS1O95177 125 aa13.62□□□□□ -0.23
RPS28-202ENST00000449223 GATA1P15976 413 aaPredicted RBP13.62□□□□□ -0.23
RPS28-202ENST00000449223 RAB5BP61020 215 aa13.62□□□□□ -0.23
RPS28-202ENST00000449223 PRELID3AQ96N28 172 aa13.62□□□□□ -0.23
RPS28-202ENST00000449223 IGHV3-73A0A0B4J1V6 119 aa13.61□□□□□ -0.23
RPS28-202ENST00000449223 SMKR1H3BMG3 65 aa13.61□□□□□ -0.23
RPS28-202ENST00000449223 NCR2O95944 276 aa13.61□□□□□ -0.23
RPS28-202ENST00000449223 FHL2Q14192 279 aa13.61□□□□□ -0.23
RPS28-202ENST00000449223 C12orf74Q32Q52 190 aa13.61□□□□□ -0.23
RPS28-202ENST00000449223 Q6ZSN1 163 aa13.61□□□□□ -0.23
RPS28-202ENST00000449223 TRBV6-4A0A1B0GX49 114 aa13.6□□□□□ -0.23
RPS28-202ENST00000449223 PRSS47A8MTI9 375 aa13.6□□□□□ -0.23
RPS28-202ENST00000449223 ATP5G1P05496 136 aa13.6□□□□□ -0.23
RPS28-202ENST00000449223 OR10J3Q5JRS4 329 aa13.6□□□□□ -0.23
RPS28-202ENST00000449223 FBN3Q75N90 2809 aa13.6□□□□□ -0.23
RPS28-202ENST00000449223 TRBV6-5A0A0K0K1A5 114 aa13.59□□□□□ -0.23
RPS28-202ENST00000449223 TNFRSF6BO95407 300 aa13.59□□□□□ -0.23
RPS28-202ENST00000449223 NPYP01303 97 aa13.59□□□□□ -0.23
RPS28-202ENST00000449223 Q0VG73 95 aa13.59□□□□□ -0.23
RPS28-202ENST00000449223 C18orf32Q8TCD1 76 aa13.59□□□□□ -0.23
RPS28-202ENST00000449223 TRBV10-1A0A0K0K1A3 114 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms