RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PRADC1Q9BSG0 188 aa10.04□□□□□ -0.8
USP39-206ENST00000448971 Q9H8V8 135 aa10.04□□□□□ -0.8
USP39-206ENST00000448971 RBFOX3A6NFN3 312 aa10.03□□□□□ -0.8
USP39-206ENST00000448971 RHODO00212 210 aa10.03□□□□□ -0.8
USP39-206ENST00000448971 CXCL1P09341 107 aa10.03□□□□□ -0.8
USP39-206ENST00000448971 TTC32Q5I0X7 151 aa10.03□□□□□ -0.8
USP39-206ENST00000448971 SLC25A29Q8N8R3 303 aa10.03□□□□□ -0.8
USP39-206ENST00000448971 TRBV20OR9-2A0A075B6H5 130 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 TRBV6-4A0A1B0GX49 114 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 NXPH4O95158 308 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 IGLV2-8P01709 118 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 CEBPGP53567 150 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 C1orf134Q5TEV5 83 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 JPT2Q9H910 190 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 SCRT2Q9NQ03 307 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 BIN3Q9NQY0 253 aa10.02□□□□□ -0.81
USP39-206ENST00000448971 P01737 135 aa10.01□□□□□ -0.81
USP39-206ENST00000448971 CDPF1Q6NVV7 123 aa10.01□□□□□ -0.81
USP39-206ENST00000448971 LYPD5Q6UWN5 251 aa10.01□□□□□ -0.81
USP39-206ENST00000448971 SH2D6Q7Z4S9 175 aa10.01□□□□□ -0.81
USP39-206ENST00000448971 OR2D3Q8NGH3 330 aa10.01□□□□□ -0.81
USP39-206ENST00000448971 OR10AG1Q8NH19 301 aa10.01□□□□□ -0.81
USP39-206ENST00000448971 LYPD6BQ8NI32 183 aa10.01□□□□□ -0.81
USP39-206ENST00000448971 SAMD10Q9BYL1 202 aa10.01□□□□□ -0.81
USP39-206ENST00000448971 EIF5A2Q9GZV4 153 aaKnown RBP10.01□□□□□ -0.81
USP39-206ENST00000448971 A0A087WWL8 130 aa10□□□□□ -0.81
USP39-206ENST00000448971 TMEM250H0YL14 139 aa10□□□□□ -0.81
USP39-206ENST00000448971 SIVA1O15304 175 aa10□□□□□ -0.81
USP39-206ENST00000448971 SPANXN1Q5VSR9 72 aa10□□□□□ -0.81
USP39-206ENST00000448971 SFRP2Q96HF1 295 aa10□□□□□ -0.81
USP39-206ENST00000448971 TPPP3Q9BW30 176 aa10□□□□□ -0.81
USP39-206ENST00000448971 MUC21A0A0G2JKD1 596 aa9.99□□□□□ -0.81
USP39-206ENST00000448971 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
USP39-206ENST00000448971 XKRY2A2RUG3 117 aa9.99□□□□□ -0.81
USP39-206ENST00000448971 C19orf71A6NCJ1 209 aa9.99□□□□□ -0.81
USP39-206ENST00000448971 SNAI2O43623 268 aa9.99□□□□□ -0.81
USP39-206ENST00000448971 RPS20P60866 119 aaKnown RBP9.99□□□□□ -0.81
USP39-206ENST00000448971 FAM210AQ96ND0 272 aa9.99□□□□□ -0.81
USP39-206ENST00000448971 GAGE12JA6NER3 117 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 OR5AL1P0C617 328 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 GZMBP10144 247 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 SSTP61278 116 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 GAGE1Q13065 139 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 GAGE4Q13068 117 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 GAGE5Q13069 117 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 GAGE13Q4V321 117 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 C6orf223Q8N319 242 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 FER1L6-AS1Q8NA97 138 aa9.98□□□□□ -0.81
USP39-206ENST00000448971 APOBP04114 4563 aaKnown RBP9.98□□□□□ -0.81
USP39-206ENST00000448971 A0A1W2PPQ1 181 aa9.97□□□□□ -0.81
USP39-206ENST00000448971 ZNF56Q15929 161 aa9.97□□□□□ -0.81
USP39-206ENST00000448971 UFSP1Q6NVU6 142 aa9.97□□□□□ -0.81
USP39-206ENST00000448971 TEX261Q6UWH6 196 aa9.97□□□□□ -0.81
USP39-206ENST00000448971 Q6ZSN1 163 aa9.97□□□□□ -0.81
USP39-206ENST00000448971 WFDC10BQ8IUB3 73 aa9.97□□□□□ -0.81
USP39-206ENST00000448971 KRTAP1-5Q9BYS1 174 aa9.97□□□□□ -0.81
USP39-206ENST00000448971 CDK2AP2O75956 126 aa9.96□□□□□ -0.82
USP39-206ENST00000448971 C14orf178Q8N769 122 aaPredicted RBP9.96□□□□□ -0.82
USP39-206ENST00000448971 ATP6V0E2Q8NHE4 81 aa9.96□□□□□ -0.82
USP39-206ENST00000448971 AP1S3Q96PC3 154 aa9.96□□□□□ -0.82
USP39-206ENST00000448971 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.82
USP39-206ENST00000448971 LY96Q9Y6Y9 160 aa9.96□□□□□ -0.82
USP39-206ENST00000448971 K7EN84 100 aa9.95□□□□□ -0.82
USP39-206ENST00000448971 CRYGDP07320 174 aa9.95□□□□□ -0.82
USP39-206ENST00000448971 IGLC6P0CF74 106 aa9.95□□□□□ -0.82
USP39-206ENST00000448971 SMIM17P0DL12 118 aa9.95□□□□□ -0.82
USP39-206ENST00000448971 OR10J3Q5JRS4 329 aa9.95□□□□□ -0.82
USP39-206ENST00000448971 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
USP39-206ENST00000448971 SMIM7Q9BQ49 75 aa9.95□□□□□ -0.82
USP39-206ENST00000448971 RNASE7Q9H1E1 156 aaKnown RBP9.95□□□□□ -0.82
USP39-206ENST00000448971 RPP21Q9H633 154 aaKnown RBP9.95□□□□□ -0.82
USP39-206ENST00000448971 HERC1Q15751 4861 aa9.95□□□□□ -0.82
USP39-206ENST00000448971 TIRAPP58753 221 aa9.94□□□□□ -0.82
USP39-206ENST00000448971 NUDT10Q8NFP7 164 aa9.94□□□□□ -0.82
USP39-206ENST00000448971 NUDT11Q96G61 164 aa9.94□□□□□ -0.82
USP39-206ENST00000448971 DNAH5Q8TE73 4624 aa9.94□□□□□ -0.82
USP39-206ENST00000448971 TRAV8-6A0A0B4J262 113 aa9.93□□□□□ -0.82
USP39-206ENST00000448971 ZNF727A8MUV8 499 aa9.93□□□□□ -0.82
USP39-206ENST00000448971 LINC00694P0DN24 101 aa9.93□□□□□ -0.82
USP39-206ENST00000448971 EVI2AP22794 236 aa9.93□□□□□ -0.82
USP39-206ENST00000448971 CACNG7P62955 275 aa9.93□□□□□ -0.82
USP39-206ENST00000448971 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
USP39-206ENST00000448971 TRAV9-2A0A087WT02 112 aa9.92□□□□□ -0.82
USP39-206ENST00000448971 C16orf90A8MZG2 172 aa9.92□□□□□ -0.82
USP39-206ENST00000448971 F5H697 171 aa9.92□□□□□ -0.82
USP39-206ENST00000448971 NDUFS6O75380 124 aaKnown RBP9.92□□□□□ -0.82
USP39-206ENST00000448971 MGPP08493 103 aa9.92□□□□□ -0.82
USP39-206ENST00000448971 SRP19P09132 144 aaKnown RBP9.92□□□□□ -0.82
USP39-206ENST00000448971 LINC00315P59091 139 aa9.92□□□□□ -0.82
USP39-206ENST00000448971 RPL36AP83881 106 aaKnown RBP9.92□□□□□ -0.82
USP39-206ENST00000448971 LELP1Q5T871 98 aa9.92□□□□□ -0.82
USP39-206ENST00000448971 MAPKAPK5-AS1Q8N8E1 139 aa9.92□□□□□ -0.82
USP39-206ENST00000448971 RPL36ALQ969Q0 106 aaKnown RBP9.92□□□□□ -0.82
USP39-206ENST00000448971 IGHV3-38A0A0C4DH36 116 aa9.91□□□□□ -0.82
USP39-206ENST00000448971 TRBV10-1A0A0K0K1A3 114 aa9.91□□□□□ -0.82
USP39-206ENST00000448971 F2Z2F3 143 aa9.91□□□□□ -0.82
USP39-206ENST00000448971 GATCO43716 136 aaKnown RBP9.91□□□□□ -0.82
USP39-206ENST00000448971 ERVFC1-1P60608 527 aa9.91□□□□□ -0.82
USP39-206ENST00000448971 RAB4BP61018 213 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms