RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-208	ENST00000448611	PRIMA1	Q86XR5	153 aa		12.97	□□□□□ -0.33
LMNA-208	ENST00000448611	ATOH7	Q8N100	152 aa		12.97	□□□□□ -0.33
LMNA-208	ENST00000448611	SYT8	Q8NBV8	401 aa		12.97	□□□□□ -0.33
LMNA-208	ENST00000448611	STH	Q8IWL8	128 aa		12.96	□□□□□ -0.33
LMNA-208	ENST00000448611	INS	P01308	110 aa		12.96	□□□□□ -0.34
LMNA-208	ENST00000448611	CMC4	P56277	68 aa	Predicted RBP	12.96	□□□□□ -0.34
LMNA-208	ENST00000448611	RPL39L	Q96EH5	51 aa	Known RBP	12.96	□□□□□ -0.34
LMNA-208	ENST00000448611	C20orf78	Q9BR46	151 aa		12.96	□□□□□ -0.34
LMNA-208	ENST00000448611	LINC00467	Q9BRT7	94 aa		12.96	□□□□□ -0.34
LMNA-208	ENST00000448611	C2CD3	Q4AC94	2353 aa		12.95	□□□□□ -0.34
LMNA-208	ENST00000448611		A0A087WWL8	130 aa		12.95	□□□□□ -0.34
LMNA-208	ENST00000448611	C20orf202	A1L168	122 aa		12.95	□□□□□ -0.34
LMNA-208	ENST00000448611	FCER1G	P30273	86 aa		12.95	□□□□□ -0.34
LMNA-208	ENST00000448611	SUMO2	P61956	95 aa	Known RBP	12.95	□□□□□ -0.34
LMNA-208	ENST00000448611	BEAN1	Q3B7T3	259 aa		12.95	□□□□□ -0.34
LMNA-208	ENST00000448611	LINC00482	Q8N8I6	264 aa		12.95	□□□□□ -0.34
LMNA-208	ENST00000448611	SMIM2	Q9BVW6	85 aa		12.95	□□□□□ -0.34
LMNA-208	ENST00000448611	FAM110A	Q9BQ89	295 aa		12.94	□□□□□ -0.34
LMNA-208	ENST00000448611	PF4	P02776	101 aa		12.94	□□□□□ -0.34
LMNA-208	ENST00000448611	PRM2	P04554	102 aa		12.94	□□□□□ -0.34
LMNA-208	ENST00000448611	HTN1	P15515	57 aa		12.94	□□□□□ -0.34
LMNA-208	ENST00000448611	SPATA45	Q537H7	98 aa		12.94	□□□□□ -0.34
LMNA-208	ENST00000448611	LINC01545	Q5VT33	79 aa		12.94	□□□□□ -0.34
LMNA-208	ENST00000448611	TRAV9-2	A0A087WT02	112 aa		12.93	□□□□□ -0.34
LMNA-208	ENST00000448611	PPP1R17	O96001	155 aa		12.93	□□□□□ -0.34
LMNA-208	ENST00000448611	CRYGD	P07320	174 aa		12.93	□□□□□ -0.34
LMNA-208	ENST00000448611	MAJIN	Q3KP22	176 aa		12.93	□□□□□ -0.34
LMNA-208	ENST00000448611	ZNF876P	Q49A33	203 aa		12.93	□□□□□ -0.34
LMNA-208	ENST00000448611	SUMO4	Q6EEV6	95 aa		12.93	□□□□□ -0.34
LMNA-208	ENST00000448611	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	12.93	□□□□□ -0.34
LMNA-208	ENST00000448611	NDUFAF3	Q9BU61	184 aa		12.93	□□□□□ -0.34
LMNA-208	ENST00000448611	MCRIP2	Q9BUT9	160 aa	Known RBP	12.93	□□□□□ -0.34
LMNA-208	ENST00000448611	C19orf73	Q9NVV2	129 aa		12.93	□□□□□ -0.34
LMNA-208	ENST00000448611		H0Y8G0	127 aa		12.92	□□□□□ -0.34
LMNA-208	ENST00000448611	TCAP	O15273	167 aa		12.92	□□□□□ -0.34
LMNA-208	ENST00000448611	LAGE3	Q14657	143 aa		12.92	□□□□□ -0.34
LMNA-208	ENST00000448611	LINC01587	Q99440	93 aa		12.92	□□□□□ -0.34
LMNA-208	ENST00000448611	DEFA6	Q01524	100 aa		12.92	□□□□□ -0.34
LMNA-208	ENST00000448611	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.92	□□□□□ -0.34
LMNA-208	ENST00000448611	TMEM158	Q8WZ71	300 aa		12.92	□□□□□ -0.34
LMNA-208	ENST00000448611	XCL2	Q9UBD3	114 aa		12.92	□□□□□ -0.34
LMNA-208	ENST00000448611	FAM74A4	Q5TZK3	123 aa		12.91	□□□□□ -0.34
LMNA-208	ENST00000448611	C11orf72	Q8NBR9	251 aa		12.91	□□□□□ -0.34
LMNA-208	ENST00000448611	IFI27L1	Q96BM0	104 aa		12.91	□□□□□ -0.34
LMNA-208	ENST00000448611	C14orf144	Q96I85	54 aa		12.91	□□□□□ -0.34
LMNA-208	ENST00000448611		F5H697	171 aa		12.9	□□□□□ -0.35
LMNA-208	ENST00000448611	ZNF415	Q09FC8	603 aa		12.9	□□□□□ -0.35
LMNA-208	ENST00000448611	C1orf158	Q8N1D5	194 aa		12.9	□□□□□ -0.35
LMNA-208	ENST00000448611	MIEN1	Q9BRT3	115 aa		12.9	□□□□□ -0.35
LMNA-208	ENST00000448611	WFDC10A	Q9H1F0	79 aa		12.9	□□□□□ -0.35
LMNA-208	ENST00000448611	NUTF2	P61970	127 aa	Known RBP	12.89	□□□□□ -0.35
LMNA-208	ENST00000448611	KRTAP24-1	Q3LI83	254 aa		12.89	□□□□□ -0.35
LMNA-208	ENST00000448611	PTH2	Q96A98	100 aa		12.89	□□□□□ -0.35
LMNA-208	ENST00000448611	PMCHL2	Q9BQD1	86 aa		12.89	□□□□□ -0.35
LMNA-208	ENST00000448611		K7EMI3	77 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	RPL32	P62910	135 aa	Known RBP	12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	PIK3CD-AS1	Q5SR53	167 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	C18orf15	Q96N68	181 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	ATR	Q13535	2644 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611		M0R2P5	195 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	IGLL1	P15814	213 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	ZNF56	Q15929	161 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	LGALS9B	Q3B8N2	356 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	LGALS9C	Q6DKI2	356 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	CSTL1	Q9H114	145 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611	ST20	Q9HBF5	79 aa		12.88	□□□□□ -0.35
LMNA-208	ENST00000448611		M0QY20	66 aa		12.87	□□□□□ -0.35
LMNA-208	ENST00000448611	GIG44	P09565	113 aa	Predicted RBP	12.87	□□□□□ -0.35
LMNA-208	ENST00000448611	ORMDL2	Q53FV1	153 aa		12.87	□□□□□ -0.35
LMNA-208	ENST00000448611	CITED1	Q99966	193 aa		12.87	□□□□□ -0.35
LMNA-208	ENST00000448611	TRBV6-5	A0A0K0K1A5	114 aa		12.86	□□□□□ -0.35
LMNA-208	ENST00000448611	IGLC3	P0DOY3	106 aa		12.86	□□□□□ -0.35
LMNA-208	ENST00000448611	POLR2K	P53803	58 aa	Known RBP	12.86	□□□□□ -0.35
LMNA-208	ENST00000448611	MORN3	Q6PF18	240 aa	Predicted RBP	12.86	□□□□□ -0.35
LMNA-208	ENST00000448611	FBN1	P35555	2871 aa	Known RBP	12.86	□□□□□ -0.35
LMNA-208	ENST00000448611	hDV102S1	A0JD36	115 aa		12.86	□□□□□ -0.35
LMNA-208	ENST00000448611	NUDT3	O95989	172 aa		12.86	□□□□□ -0.35
LMNA-208	ENST00000448611	SPX	Q9BT56	116 aa		12.86	□□□□□ -0.35
LMNA-208	ENST00000448611	TMEM208	Q9BTX3	173 aa		12.86	□□□□□ -0.35
LMNA-208	ENST00000448611	AZU1	P20160	251 aa		12.85	□□□□□ -0.35
LMNA-208	ENST00000448611	UFSP1	Q6NVU6	142 aa		12.85	□□□□□ -0.35
LMNA-208	ENST00000448611	SPATA3	Q8NHX4	192 aa		12.85	□□□□□ -0.35
LMNA-208	ENST00000448611		A8MWV9	139 aa		12.84	□□□□□ -0.35
LMNA-208	ENST00000448611	ATP5L	O75964	103 aa		12.84	□□□□□ -0.35
LMNA-208	ENST00000448611	NEGR1	Q7Z3B1	354 aa		12.84	□□□□□ -0.35
LMNA-208	ENST00000448611	UQCR10	Q9UDW1	63 aa		12.84	□□□□□ -0.35
LMNA-208	ENST00000448611	GOLT1B	Q9Y3E0	138 aa		12.84	□□□□□ -0.35
LMNA-208	ENST00000448611	IGHV3OR16-12	A0A075B7B8	117 aa		12.83	□□□□□ -0.36
LMNA-208	ENST00000448611	INSL3	P51460	131 aa		12.83	□□□□□ -0.36
LMNA-208	ENST00000448611	IL17D	Q8TAD2	202 aa		12.83	□□□□□ -0.36
LMNA-208	ENST00000448611	EDA2R	Q9HAV5	297 aa		12.83	□□□□□ -0.36
LMNA-208	ENST00000448611	TRBV27	A0A0K0K1C4	114 aa		12.82	□□□□□ -0.36
LMNA-208	ENST00000448611	SDHAF1	A6NFY7	115 aa		12.82	□□□□□ -0.36
LMNA-208	ENST00000448611	VCY	O14598	125 aa		12.82	□□□□□ -0.36
LMNA-208	ENST00000448611	RPL35A	P18077	110 aa	Known RBP	12.82	□□□□□ -0.36
LMNA-208	ENST00000448611	TOMM6	Q96B49	74 aa		12.82	□□□□□ -0.36
LMNA-208	ENST00000448611	RNASE8	Q8TDE3	154 aa	Known RBP	12.82	□□□□□ -0.36
LMNA-208	ENST00000448611	HSBP1L1	C9JCN9	74 aa		12.81	□□□□□ -0.36
LMNA-208	ENST00000448611	CTAG1A	P78358	180 aa		12.81	□□□□□ -0.36
LMNA-208	ENST00000448611	CFAP126	Q5VTH2	177 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms