RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 TRAV12-2A0A075B6T6 113 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 SAP30O75446 220 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 INSP01308 110 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 C3orf79P0CE67 100 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 BTF3P20290 206 aaKnown RBP5.06□□□□□ -1.6
RFC4-209ENST00000448497 IFI27P40305 119 aaPredicted RBP5.06□□□□□ -1.6
RFC4-209ENST00000448497 PKIAP61925 76 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 NUTF2P61970 127 aaKnown RBP5.06□□□□□ -1.6
RFC4-209ENST00000448497 NSUN5P1Q3KNT7 163 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 Q8N8P6 123 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 Q8N976 141 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 SPXQ9BT56 116 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 EDA2RQ9HAV5 297 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 HSPB8Q9UJY1 196 aa5.06□□□□□ -1.6
RFC4-209ENST00000448497 TEP1Q99973 2627 aaKnown RBP5.05□□□□□ -1.6
RFC4-209ENST00000448497 NACAE9PAV3 2078 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 A0A096LNJ9 63 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 LEPROTL1O95214 131 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 SCGB1D1O95968 90 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 IGKV3-20P01619 116 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 RBMY1A1P0DJD3 496 aaKnown RBP5.05□□□□□ -1.6
RFC4-209ENST00000448497 RBMY1CP0DJD4 496 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 RBMY1FQ15415 496 aaKnown RBP5.05□□□□□ -1.6
RFC4-209ENST00000448497 PMCHL1Q16048 86 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 HIST2H2BDQ6DRA6 164 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 PET117Q6UWS5 81 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 STHQ8IWL8 128 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 SPATA25Q9BR10 227 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 TMEM70Q9BUB7 260 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 MDFICQ9P1T7 246 aa5.05□□□□□ -1.6
RFC4-209ENST00000448497 KIR2DL5BA0A0G2JN68 375 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 KIR2DL5BA0A0G2JPC4 375 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 TRBV6-5A0A0K0K1A5 114 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 LINC01549A6NIU2 74 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 TSTD3H0UI37 97 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 SMKR1H3BMG3 65 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 NCR2O95944 276 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 HBDP02042 147 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 SMIM17P0DL12 118 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 FCER1GP30273 86 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 KRTDAPP60985 99 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 SSTP61278 116 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 ZNF415Q09FC8 603 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 C9orf66Q5T8R8 295 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 MORN3Q6PF18 240 aaPredicted RBP5.04□□□□□ -1.6
RFC4-209ENST00000448497 KIR2DL5AQ8N109 375 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 C14orf178Q8N769 122 aaPredicted RBP5.04□□□□□ -1.6
RFC4-209ENST00000448497 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.04□□□□□ -1.6
RFC4-209ENST00000448497 WFDC9Q8NEX5 89 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 RASL10AQ92737 203 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 MCRIP2Q9BUT9 160 aaKnown RBP5.04□□□□□ -1.6
RFC4-209ENST00000448497 ZNF747Q9BV97 191 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 C1QTNF4Q9BXJ3 329 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 ZMAT4Q9H898 229 aa5.04□□□□□ -1.6
RFC4-209ENST00000448497 C20orf202A1L168 122 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 CBY3A6NI87 242 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 A8MWV9 139 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 SYS1-DBNDD2H3BUS1 97 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 M0R2P5 195 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 GAS8-AS1O95177 125 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 CRYGDP07320 174 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 SUMO2P61956 95 aaKnown RBP5.03□□□□□ -1.6
RFC4-209ENST00000448497 LINC01545Q5VT33 79 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 ZNF664Q8N3J9 261 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 C11orf72Q8NBR9 251 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 IL17DQ8TAD2 202 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 SMIM2Q9BVW6 85 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 MAP1LC3CQ9BXW4 147 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 TIMM8BQ9Y5J9 83 aaPredicted RBP5.03□□□□□ -1.6
RFC4-209ENST00000448497 NIPBLQ6KC79 2804 aaeCLIP5.03□□□□□ -1.6
RFC4-209ENST00000448497 BAHCC1Q9P281 2608 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 TENM1Q9UKZ4 2725 aa5.03□□□□□ -1.6
RFC4-209ENST00000448497 LOC389332A0A1B0GUA5 103 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.02□□□□□ -1.61
RFC4-209ENST00000448497 TCAPO15273 167 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 GIG44P09565 113 aaPredicted RBP5.02□□□□□ -1.61
RFC4-209ENST00000448497 GATA1P15976 413 aaPredicted RBP5.02□□□□□ -1.61
RFC4-209ENST00000448497 G0S2P27469 103 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 POLR2KP53803 58 aaKnown RBP5.02□□□□□ -1.61
RFC4-209ENST00000448497 FXYD7P58549 80 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 LAGE3Q14657 143 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 ZNF876PQ49A33 203 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 ORMDL2Q53FV1 153 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 UFSP1Q6NVU6 142 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 C1orf158Q8N1D5 194 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 LINC01587Q99440 93 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 JMJD1CQ15652 2540 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 ATRQ13535 2644 aa5.02□□□□□ -1.61
RFC4-209ENST00000448497 TRAV26-2A0A0B4J265 109 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 TRBV27A0A0K0K1C4 114 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 H7C1H1 209 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 M0QY20 66 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 RHODO00212 210 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 SPRY2O43597 315 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 LGALS9BQ3B8N2 356 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 LGALS9CQ6DKI2 356 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 SUMO4Q6EEV6 95 aa5.01□□□□□ -1.61
RFC4-209ENST00000448497 ZFP2Q6ZN57 461 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms