RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 CD28P10747 220 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 GATA1P15976 413 aaPredicted RBP4.55□□□□□ -1.68
PROM1-201ENST00000447510 HIST2H2BDQ6DRA6 164 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 NBPF19A0A087WUL8 3843 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 IGKV3-7A0A075B6H7 116 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 TRBV7-1A0A0A6YYK4 115 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 H3BUA1 57 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 NDUFA7O95182 113 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 ZNF688P0C7X2 276 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 IFITM1P13164 125 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 FHL3Q13643 280 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 DUX3Q96PT4 197 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 NSD1Q96L73 2696 aaPredicted RBP4.55□□□□□ -1.68
PROM1-201ENST00000447510 IGHV3OR16-13A0A075B7E8 117 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 IGHV3-49A0A0A0MS15 119 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 IGHV3-74A0A0B4J1X5 117 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 C9JAW5 83 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 M0QXV9 152 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 ODF1Q14990 250 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 DEFB136Q30KP8 78 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 MRPL36Q9P0J6 103 aaKnown RBP4.55□□□□□ -1.68
PROM1-201ENST00000447510 OTOGQ6ZRI0 2925 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 CSMD1Q96PZ7 3565 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 FABP5P3A8MUU1 101 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 IGHG4P01861 327 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 NDUFV3P56181 108 aaKnown RBP4.55□□□□□ -1.68
PROM1-201ENST00000447510 RAX2Q96IS3 184 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 C8orf49Q96NF6 230 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 METTL26Q96S19 204 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 ZNF492Q9P255 531 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 KLF12Q9Y4X4 402 aa4.55□□□□□ -1.68
PROM1-201ENST00000447510 TRAV4A0A0B4J268 109 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 CRYGCP07315 174 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 CT83Q5H943 113 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 FAM104BQ5XKR9 115 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 FAM110AQ9BQ89 295 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 PPDPFQ9H3Y8 114 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 HIGD1AQ9Y241 93 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 IGLV11-55A0A075B6I3 123 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 C19orf71A6NCJ1 209 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 ZNF815PA8K554 130 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 TMEM262E9PQX1 116 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 LYRM7Q5U5X0 104 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 PHLDA1Q8WV24 401 aaPredicted RBP4.54□□□□□ -1.68
PROM1-201ENST00000447510 C17orf77Q96MU5 243 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 GFRA4Q9GZZ7 299 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 MSRB1Q9NZV6 116 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 ZNF785A8K8V0 405 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 LINC01619G3V211 115 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 EGR2P11161 476 aaPredicted RBP4.54□□□□□ -1.68
PROM1-201ENST00000447510 SYNJ2BPP57105 145 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 KRTAP24-1Q3LI83 254 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 TEN1Q86WV5 123 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 UBE2E2Q96LR5 201 aa4.54□□□□□ -1.68
PROM1-201ENST00000447510 NIPBLQ6KC79 2804 aaeCLIP4.53□□□□□ -1.68
PROM1-201ENST00000447510 IGHV3-66A0A0C4DH42 116 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 TMEM89A2RUT3 159 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 BRI3O95415 125 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 LGALS1P09382 135 aaKnown RBP4.53□□□□□ -1.68
PROM1-201ENST00000447510 TMEM75Q8N9X5 138 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 Q8TAT8 98 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 FANCD2OSQ96PS1 177 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 MLST8Q9BVC4 326 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 C16orf95Q9H693 158 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 PEMTQ9UBM1 199 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 CCL24O00175 119 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 GAS8-AS1O95177 125 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 HIGD1BQ9P298 99 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 CGB1A6NKQ9 187 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 SMCPP49901 116 aaPredicted RBP4.53□□□□□ -1.68
PROM1-201ENST00000447510 CFAP126Q5VTH2 177 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 IGFL4Q6B9Z1 124 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 Q6ZQT7 251 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 ZNF491Q8N8L2 437 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 C15orf53Q8NAA6 179 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 PRO0461Q9UI25 63 aa4.53□□□□□ -1.68
PROM1-201ENST00000447510 CSMD2Q7Z408 3487 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 J3KRW8 73 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 K7EIM0 57 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 NTN5Q8WTR8 489 aaPredicted RBP4.52□□□□□ -1.69
PROM1-201ENST00000447510 CARD19Q96LW7 228 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 COL6A5A8TX70 2615 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 TRAV26-2A0A0B4J265 109 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 INS-IGF2F8WCM5 200 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 TMEM78Q5T7P6 136 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 RNF125Q96EQ8 232 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 IGHV4OR15-8A0A075B7B6 117 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 A0A087WW49 117 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 IGKV2-40A0A087WW87 121 aaPredicted RBP4.52□□□□□ -1.69
PROM1-201ENST00000447510 I3L2K1 104 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 ATP5LO75964 103 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 TCL1BO95988 128 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 IGKV2D-40P01614 121 aaPredicted RBP4.52□□□□□ -1.69
PROM1-201ENST00000447510 PSMB8P28062 276 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 HOXD3P31249 432 aaPredicted RBP4.52□□□□□ -1.69
PROM1-201ENST00000447510 SLURP1P55000 103 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 PROK1P58294 105 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 PVRIGQ6DKI7 326 aa4.52□□□□□ -1.69
PROM1-201ENST00000447510 OTORQ9NRC9 128 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms