RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 DAZ4Q86SG3 579 aaKnown RBP6.9□□□□□ -1.3
PTPRN-208ENST00000446182 TMEM75Q8N9X5 138 aa6.9□□□□□ -1.3
PTPRN-208ENST00000446182 HSD17B11Q8NBQ5 300 aa6.9□□□□□ -1.3
PTPRN-208ENST00000446182 NDFIP1Q9BT67 221 aa6.9□□□□□ -1.3
PTPRN-208ENST00000446182 DAZ3Q9NR90 486 aaKnown RBP6.9□□□□□ -1.3
PTPRN-208ENST00000446182 SERTM2A0A1B0GWG4 89 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 A0A1W2PPV4 95 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 GAGE12JA6NER3 117 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 GCGP01275 180 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 RNASE3P12724 160 aaKnown RBP6.89□□□□□ -1.31
PTPRN-208ENST00000446182 GAGE1Q13065 139 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 GAGE4Q13068 117 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 GAGE5Q13069 117 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 GAGE13Q4V321 117 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 MBD3L1Q8WWY6 194 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 BAALCQ8WXS3 180 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 NKX6-2Q9C056 277 aaPredicted RBP6.89□□□□□ -1.31
PTPRN-208ENST00000446182 SH3BGRL3Q9H299 93 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 PARLQ9H300 379 aa6.89□□□□□ -1.31
PTPRN-208ENST00000446182 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 SCO1O75880 301 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 IGLV2-11P01706 119 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 TCRAP04437 139 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 ARL14EPLP0DKL9 152 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 FHITP49789 147 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 RHEBQ15382 184 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 SERTAD4-AS1Q5TG53 156 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 C5orf17Q8NAS9 161 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 FAM213BQ8TBF2 198 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 EIF5A2Q9GZV4 153 aaKnown RBP6.88□□□□□ -1.31
PTPRN-208ENST00000446182 Q9UF83 564 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 PSG8Q9UQ74 426 aa6.88□□□□□ -1.31
PTPRN-208ENST00000446182 RBFOX3A6NFN3 312 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 GGTLC3B5MD39 225 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 C9JQL5 133 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 SMUG1Q53HV7 270 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 ZFP2Q6ZN57 461 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 OR10G9Q8NGN4 311 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 OR10G7Q8NGN6 311 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 DNAJC30Q96LL9 226 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 LINC00479Q96M42 142 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 CHAC1Q9BUX1 264 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 COX11Q9Y6N1 276 aa6.87□□□□□ -1.31
PTPRN-208ENST00000446182 A0A087WWC5 75 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 IGKV3D-20A0A0C4DH25 116 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 A8MWV9 139 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 B4DEV8 164 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 K7EQM0 130 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 STAG3L2P0CL84 134 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 STAG3L3P0CL85 134 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 ADCYAP1P18509 176 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 CDC34P49427 236 aaPredicted RBP6.86□□□□□ -1.31
PTPRN-208ENST00000446182 FLI1Q01543 452 aaPredicted RBP6.86□□□□□ -1.31
PTPRN-208ENST00000446182 PNRC1Q12796 327 aaPredicted RBP6.86□□□□□ -1.31
PTPRN-208ENST00000446182 FAM74A3Q4VXF1 159 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 PIK3CD-AS1Q5SR53 167 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 UFSP1Q6NVU6 142 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 ATRAIDQ6UW56 229 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 PRNTQ86SH4 94 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 C14orf178Q8N769 122 aaPredicted RBP6.86□□□□□ -1.31
PTPRN-208ENST00000446182 CYB561D1Q8N8Q1 229 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 Q8N976 141 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 SYT8Q8NBV8 401 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 RMI2Q96E14 147 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 SAMD10Q9BYL1 202 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 ACTR3CQ9C0K3 210 aaPredicted RBP6.86□□□□□ -1.31
PTPRN-208ENST00000446182 MANBALQ9NQG1 85 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 SMCO4Q9NRQ5 59 aa6.86□□□□□ -1.31
PTPRN-208ENST00000446182 OXTP01178 125 aa6.85□□□□□ -1.31
PTPRN-208ENST00000446182 GCHFRP30047 84 aa6.85□□□□□ -1.31
PTPRN-208ENST00000446182 NIT1Q86X76 327 aa6.85□□□□□ -1.31
PTPRN-208ENST00000446182 CIRBP-AS1Q8TBR5 109 aa6.85□□□□□ -1.31
PTPRN-208ENST00000446182 SFT2D1Q8WV19 159 aa6.85□□□□□ -1.31
PTPRN-208ENST00000446182 JPT2Q9H910 190 aa6.85□□□□□ -1.31
PTPRN-208ENST00000446182 EPDR1Q9UM22 224 aa6.85□□□□□ -1.31
PTPRN-208ENST00000446182 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 IGKV2D-24A0A075B6R9 120 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 CTXND1A0A1B0GTU2 59 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 S100A4P26447 101 aaKnown RBP6.84□□□□□ -1.31
PTPRN-208ENST00000446182 FGF8P55075 233 aaPredicted RBP6.84□□□□□ -1.31
PTPRN-208ENST00000446182 SUMO1P63165 101 aaKnown RBP6.84□□□□□ -1.31
PTPRN-208ENST00000446182 CCL20P78556 96 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 CLRN3Q8NCR9 226 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 RAB24Q969Q5 203 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 VAX2Q9UIW0 290 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 KLK12Q9UKR0 248 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 URGCP-MRPS24S4R325 110 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 ARL2-SNX15V9GYD0 113 aa6.84□□□□□ -1.31
PTPRN-208ENST00000446182 TMEM250H0YL14 139 aa6.83□□□□□ -1.32
PTPRN-208ENST00000446182 IGLV2-8P01709 118 aa6.83□□□□□ -1.32
PTPRN-208ENST00000446182 ASIPP42127 132 aa6.83□□□□□ -1.32
PTPRN-208ENST00000446182 SAPCD1Q5SSQ6 148 aa6.83□□□□□ -1.32
PTPRN-208ENST00000446182 C15orf54Q8N8G6 183 aa6.83□□□□□ -1.32
PTPRN-208ENST00000446182 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
PTPRN-208ENST00000446182 TMEM242Q9NWH2 141 aa6.83□□□□□ -1.32
PTPRN-208ENST00000446182 IL36BQ9NZH7 164 aa6.83□□□□□ -1.32
PTPRN-208ENST00000446182 MAP1LC3B2A6NCE7 125 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 RHODO00212 210 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 BCL2P10415 239 aa6.82□□□□□ -1.32
PTPRN-208ENST00000446182 ZNF726P1Q15940 193 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms