RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 KNCNA6PVL3 124 aa12.57□□□□□ -0.4
LAPTM4B-201ENST00000445593 PRM2P04554 102 aa12.57□□□□□ -0.4
LAPTM4B-201ENST00000445593 PET117Q6UWS5 81 aa12.57□□□□□ -0.4
LAPTM4B-201ENST00000445593 TMEM158Q8WZ71 300 aa12.57□□□□□ -0.4
LAPTM4B-201ENST00000445593 CRXO43186 299 aaPredicted RBP12.57□□□□□ -0.4
LAPTM4B-201ENST00000445593 FAM74A4Q5TZK3 123 aa12.57□□□□□ -0.4
LAPTM4B-201ENST00000445593 UBE2E2Q96LR5 201 aa12.57□□□□□ -0.4
LAPTM4B-201ENST00000445593 LRRC75A-AS1Q8N1F1 130 aa12.57□□□□□ -0.4
LAPTM4B-201ENST00000445593 IFI27L1Q96BM0 104 aa12.57□□□□□ -0.4
LAPTM4B-201ENST00000445593 DKK2Q9UBU2 259 aa12.56□□□□□ -0.4
LAPTM4B-201ENST00000445593 B5MCH6 92 aa12.56□□□□□ -0.4
LAPTM4B-201ENST00000445593 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
LAPTM4B-201ENST00000445593 HSD52Q0P140 79 aa12.56□□□□□ -0.4
LAPTM4B-201ENST00000445593 YAE1D1Q9NRH1 226 aa12.56□□□□□ -0.4
LAPTM4B-201ENST00000445593 LENEPQ9Y5L5 61 aa12.56□□□□□ -0.4
LAPTM4B-201ENST00000445593 PRSS1P07477 247 aa12.55□□□□□ -0.4
LAPTM4B-201ENST00000445593 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
LAPTM4B-201ENST00000445593 JMJD8Q96S16 334 aa12.55□□□□□ -0.4
LAPTM4B-201ENST00000445593 KMT2BQ9UMN6 2715 aaPredicted RBP12.55□□□□□ -0.4
LAPTM4B-201ENST00000445593 LINC01545Q5VT33 79 aa12.55□□□□□ -0.4
LAPTM4B-201ENST00000445593 DNAJC9-AS1A6NH13 148 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 F5H697 171 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 NACAE9PAV3 2078 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 GAGE12HA6NDE8 117 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 PLA2G2AP14555 144 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 DEFB131AP59861 70 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 NRACQ8N912 160 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 ESM1Q9NQ30 184 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 MDFICQ9P1T7 246 aa12.54□□□□□ -0.4
LAPTM4B-201ENST00000445593 J3QKU1 62 aa12.53□□□□□ -0.4
LAPTM4B-201ENST00000445593 K7EQG2 157 aa12.53□□□□□ -0.4
LAPTM4B-201ENST00000445593 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
LAPTM4B-201ENST00000445593 Q6ZSV7 163 aa12.53□□□□□ -0.4
LAPTM4B-201ENST00000445593 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
LAPTM4B-201ENST00000445593 FAM19A4Q96LR4 140 aa12.53□□□□□ -0.4
LAPTM4B-201ENST00000445593 SMR3AQ99954 134 aa12.53□□□□□ -0.4
LAPTM4B-201ENST00000445593 A0A0J9YX75 114 aa12.53□□□□□ -0.4
LAPTM4B-201ENST00000445593 TMEM61Q8N0U2 210 aa12.52□□□□□ -0.41
LAPTM4B-201ENST00000445593 FOXC2Q99958 501 aa12.52□□□□□ -0.41
LAPTM4B-201ENST00000445593 NXT2Q9NPJ8 142 aaKnown RBP12.52□□□□□ -0.41
LAPTM4B-201ENST00000445593 SLC25A34Q6PIV7 304 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 APRG1Q8IVJ8 170 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 RNF183Q96D59 192 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 SPCS1Q9Y6A9 102 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 KLLNB2CW77 178 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 CD5LO43866 347 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 NMUP48645 174 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 LINC01619G3V211 115 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 K7EMI3 77 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 DYNLRB2Q8TF09 96 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 DPH3P1Q9H4G8 78 aa12.51□□□□□ -0.41
LAPTM4B-201ENST00000445593 SMIM17P0DL12 118 aa12.5□□□□□ -0.41
LAPTM4B-201ENST00000445593 RASL10AQ92737 203 aa12.5□□□□□ -0.41
LAPTM4B-201ENST00000445593 TTTY13Q9BZ97 58 aa12.5□□□□□ -0.41
LAPTM4B-201ENST00000445593 ST20Q9HBF5 79 aa12.5□□□□□ -0.41
LAPTM4B-201ENST00000445593 TMEM89A2RUT3 159 aa12.5□□□□□ -0.41
LAPTM4B-201ENST00000445593 SH2D6Q7Z4S9 175 aa12.5□□□□□ -0.41
LAPTM4B-201ENST00000445593 Q8N8P6 123 aa12.5□□□□□ -0.41
LAPTM4B-201ENST00000445593 MYOZ3Q8TDC0 251 aa12.5□□□□□ -0.41
LAPTM4B-201ENST00000445593 FCER1GP30273 86 aa12.49□□□□□ -0.41
LAPTM4B-201ENST00000445593 Q8N1Y9 231 aa12.49□□□□□ -0.41
LAPTM4B-201ENST00000445593 TRBV7-9A0A0J9YWB2 115 aa12.48□□□□□ -0.41
LAPTM4B-201ENST00000445593 LAGE3Q14657 143 aa12.48□□□□□ -0.41
LAPTM4B-201ENST00000445593 SCRT2Q9NQ03 307 aa12.48□□□□□ -0.41
LAPTM4B-201ENST00000445593 IGLV2-18A0A075B6J9 118 aa12.48□□□□□ -0.41
LAPTM4B-201ENST00000445593 IGHV3-73A0A0B4J1V6 119 aa12.48□□□□□ -0.41
LAPTM4B-201ENST00000445593 C12orf54Q6X4T0 127 aa12.48□□□□□ -0.41
LAPTM4B-201ENST00000445593 OR9G4Q8NGQ1 327 aa12.48□□□□□ -0.41
LAPTM4B-201ENST00000445593 IGHV4-4A0A075B6R2 117 aa12.47□□□□□ -0.41
LAPTM4B-201ENST00000445593 CD28P10747 220 aa12.47□□□□□ -0.41
LAPTM4B-201ENST00000445593 SUMO2P61956 95 aaKnown RBP12.47□□□□□ -0.41
LAPTM4B-201ENST00000445593 C3orf56Q8N813 242 aa12.47□□□□□ -0.41
LAPTM4B-201ENST00000445593 SMIM2Q9BVW6 85 aa12.47□□□□□ -0.41
LAPTM4B-201ENST00000445593 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
LAPTM4B-201ENST00000445593 FLNBO75369 2602 aaKnown RBP12.46□□□□□ -0.41
LAPTM4B-201ENST00000445593 LGALS9O00182 355 aa12.46□□□□□ -0.41
LAPTM4B-201ENST00000445593 INSL3P51460 131 aa12.46□□□□□ -0.42
LAPTM4B-201ENST00000445593 ETDBQ3ZM63 59 aa12.46□□□□□ -0.42
LAPTM4B-201ENST00000445593 PCP2Q8IVA1 136 aa12.46□□□□□ -0.42
LAPTM4B-201ENST00000445593 OTOGQ6ZRI0 2925 aa12.45□□□□□ -0.42
LAPTM4B-201ENST00000445593 RBMY1A1P0DJD3 496 aaKnown RBP12.45□□□□□ -0.42
LAPTM4B-201ENST00000445593 RBMY1CP0DJD4 496 aa12.45□□□□□ -0.42
LAPTM4B-201ENST00000445593 RBMY1FQ15415 496 aaKnown RBP12.45□□□□□ -0.42
LAPTM4B-201ENST00000445593 ZNF56Q15929 161 aa12.45□□□□□ -0.42
LAPTM4B-201ENST00000445593 CD300EQ496F6 205 aaPredicted RBP12.45□□□□□ -0.42
LAPTM4B-201ENST00000445593 PGPEP1Q9NXJ5 209 aa12.45□□□□□ -0.42
LAPTM4B-201ENST00000445593 LGALS9BQ3B8N2 356 aa12.45□□□□□ -0.42
LAPTM4B-201ENST00000445593 LGALS9CQ6DKI2 356 aa12.45□□□□□ -0.42
LAPTM4B-201ENST00000445593 GTSCR1Q86UQ5 136 aa12.44□□□□□ -0.42
LAPTM4B-201ENST00000445593 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
LAPTM4B-201ENST00000445593 MRAP2Q96G30 205 aa12.44□□□□□ -0.42
LAPTM4B-201ENST00000445593 CITED2Q99967 270 aaPredicted RBP12.44□□□□□ -0.42
LAPTM4B-201ENST00000445593 ZNF256Q9Y2P7 627 aaPredicted RBP12.44□□□□□ -0.42
LAPTM4B-201ENST00000445593 C4orf3Q8WVX3 66 aa12.44□□□□□ -0.42
LAPTM4B-201ENST00000445593 IGHV1OR15-1A0A075B7D0 117 aa12.43□□□□□ -0.42
LAPTM4B-201ENST00000445593 RAX2Q96IS3 184 aa12.43□□□□□ -0.42
LAPTM4B-201ENST00000445593 MRPL35Q9NZE8 188 aaKnown RBP12.43□□□□□ -0.42
LAPTM4B-201ENST00000445593 IGHV3-16A0A0C4DH30 117 aa12.43□□□□□ -0.42
LAPTM4B-201ENST00000445593 WFDC2Q14508 124 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms