RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 K7EP13 123 aa13.21□□□□□ -0.29
CLDN9-201ENST00000445369 AMTNQ6UX39 209 aa13.21□□□□□ -0.29
CLDN9-201ENST00000445369 TCTEX1D4Q5JR98 221 aa13.2□□□□□ -0.3
CLDN9-201ENST00000445369 C18orf65Q6ZTR6 163 aa13.2□□□□□ -0.3
CLDN9-201ENST00000445369 MAPKAPK5-AS1Q8N8E1 139 aa13.2□□□□□ -0.3
CLDN9-201ENST00000445369 Q96MF0 132 aa13.2□□□□□ -0.3
CLDN9-201ENST00000445369 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
CLDN9-201ENST00000445369 SLURP1P55000 103 aa13.2□□□□□ -0.3
CLDN9-201ENST00000445369 KRTAP1-3Q8IUG1 177 aa13.19□□□□□ -0.3
CLDN9-201ENST00000445369 SYT8Q8NBV8 401 aa13.19□□□□□ -0.3
CLDN9-201ENST00000445369 JMJD8Q96S16 334 aa13.19□□□□□ -0.3
CLDN9-201ENST00000445369 TRBV6-5A0A0K0K1A5 114 aa13.19□□□□□ -0.3
CLDN9-201ENST00000445369 FXYD2P54710 66 aa13.19□□□□□ -0.3
CLDN9-201ENST00000445369 DEFB136Q30KP8 78 aa13.19□□□□□ -0.3
CLDN9-201ENST00000445369 ZFP2Q6ZN57 461 aa13.19□□□□□ -0.3
CLDN9-201ENST00000445369 CYSLTR1Q9Y271 337 aa13.19□□□□□ -0.3
CLDN9-201ENST00000445369 F5H697 171 aa13.18□□□□□ -0.3
CLDN9-201ENST00000445369 GCSHP23434 173 aa13.18□□□□□ -0.3
CLDN9-201ENST00000445369 PRSS29PA6NIE9 313 aa13.17□□□□□ -0.3
CLDN9-201ENST00000445369 LINC01549A6NIU2 74 aa13.17□□□□□ -0.3
CLDN9-201ENST00000445369 VCYO14598 125 aa13.17□□□□□ -0.3
CLDN9-201ENST00000445369 TRBV27A0A0K0K1C4 114 aa13.17□□□□□ -0.3
CLDN9-201ENST00000445369 SDHAF1A6NFY7 115 aa13.17□□□□□ -0.3
CLDN9-201ENST00000445369 H3BUT2 72 aa13.17□□□□□ -0.3
CLDN9-201ENST00000445369 CRYGDP07320 174 aa13.17□□□□□ -0.3
CLDN9-201ENST00000445369 FAM74A4Q5TZK3 123 aa13.17□□□□□ -0.3
CLDN9-201ENST00000445369 RNASE8Q8TDE3 154 aaKnown RBP13.17□□□□□ -0.3
CLDN9-201ENST00000445369 TP53TG1Q9Y2A0 90 aa13.17□□□□□ -0.3
CLDN9-201ENST00000445369 PTPN13Q12923 2485 aa13.16□□□□□ -0.3
CLDN9-201ENST00000445369 TSHBP01222 138 aa13.16□□□□□ -0.3
CLDN9-201ENST00000445369 KIR2DL4Q99706 377 aa13.16□□□□□ -0.3
CLDN9-201ENST00000445369 TM2D2Q9BX73 214 aa13.16□□□□□ -0.3
CLDN9-201ENST00000445369 IGIPA6NJ69 53 aa13.16□□□□□ -0.3
CLDN9-201ENST00000445369 A8MTW9 85 aa13.16□□□□□ -0.3
CLDN9-201ENST00000445369 LINC01619G3V211 115 aa13.16□□□□□ -0.3
CLDN9-201ENST00000445369 RIPPLY3P57055 190 aa13.16□□□□□ -0.3
CLDN9-201ENST00000445369 MORN3Q6PF18 240 aaPredicted RBP13.16□□□□□ -0.3
CLDN9-201ENST00000445369 M0QY20 66 aa13.15□□□□□ -0.3
CLDN9-201ENST00000445369 RBMY1A1P0DJD3 496 aaKnown RBP13.15□□□□□ -0.3
CLDN9-201ENST00000445369 RBMY1CP0DJD4 496 aa13.15□□□□□ -0.3
CLDN9-201ENST00000445369 RBMY1FQ15415 496 aaKnown RBP13.15□□□□□ -0.3
CLDN9-201ENST00000445369 ZNF56Q15929 161 aa13.15□□□□□ -0.3
CLDN9-201ENST00000445369 UFSP1Q6NVU6 142 aa13.15□□□□□ -0.3
CLDN9-201ENST00000445369 CEND1Q8N111 149 aa13.15□□□□□ -0.3
CLDN9-201ENST00000445369 C4orf3Q8WVX3 66 aa13.15□□□□□ -0.3
CLDN9-201ENST00000445369 RAB37Q96AX2 223 aa13.15□□□□□ -0.3
CLDN9-201ENST00000445369 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
CLDN9-201ENST00000445369 OR11H12B2RN74 326 aa13.14□□□□□ -0.31
CLDN9-201ENST00000445369 OR11H1Q8NG94 326 aa13.14□□□□□ -0.31
CLDN9-201ENST00000445369 OR11H2Q8NH07 326 aa13.14□□□□□ -0.31
CLDN9-201ENST00000445369 NAA38Q9BRA0 125 aaKnown RBP13.14□□□□□ -0.31
CLDN9-201ENST00000445369 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
CLDN9-201ENST00000445369 GAGE10A6NGK3 116 aa13.14□□□□□ -0.31
CLDN9-201ENST00000445369 KNCNA6PVL3 124 aa13.14□□□□□ -0.31
CLDN9-201ENST00000445369 SMIM13P0DJ93 91 aa13.14□□□□□ -0.31
CLDN9-201ENST00000445369 TAL2Q16559 108 aa13.14□□□□□ -0.31
CLDN9-201ENST00000445369 ZNF256Q9Y2P7 627 aaPredicted RBP13.14□□□□□ -0.31
CLDN9-201ENST00000445369 SORL1Q92673 2214 aa13.13□□□□□ -0.31
CLDN9-201ENST00000445369 E9PLD3 99 aa13.13□□□□□ -0.31
CLDN9-201ENST00000445369 DEFB131AP59861 70 aa13.13□□□□□ -0.31
CLDN9-201ENST00000445369 RPL39P62891 51 aaKnown RBP13.13□□□□□ -0.31
CLDN9-201ENST00000445369 TIMM17AQ99595 171 aa13.13□□□□□ -0.31
CLDN9-201ENST00000445369 DEFB104AQ8WTQ1 72 aa13.12□□□□□ -0.31
CLDN9-201ENST00000445369 TMEM141Q96I45 108 aa13.12□□□□□ -0.31
CLDN9-201ENST00000445369 PEMTQ9UBM1 199 aa13.12□□□□□ -0.31
CLDN9-201ENST00000445369 CENPEQ02224 2701 aa13.12□□□□□ -0.31
CLDN9-201ENST00000445369 IGLV4-69A0A075B6H9 119 aa13.12□□□□□ -0.31
CLDN9-201ENST00000445369 MYMXA0A1B0GTQ4 84 aa13.12□□□□□ -0.31
CLDN9-201ENST00000445369 K7EP34 96 aa13.12□□□□□ -0.31
CLDN9-201ENST00000445369 ZNF876PQ49A33 203 aa13.12□□□□□ -0.31
CLDN9-201ENST00000445369 GTF2H5Q6ZYL4 71 aa13.12□□□□□ -0.31
CLDN9-201ENST00000445369 TRPT1Q86TN4 253 aaKnown RBP13.12□□□□□ -0.31
CLDN9-201ENST00000445369 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
CLDN9-201ENST00000445369 A0A1W2PPM0 123 aa13.11□□□□□ -0.31
CLDN9-201ENST00000445369 H3BMM0 161 aa13.11□□□□□ -0.31
CLDN9-201ENST00000445369 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
CLDN9-201ENST00000445369 MXRA5Q9NR99 2828 aa13.11□□□□□ -0.31
CLDN9-201ENST00000445369 RBMY1BA6NDE4 496 aaKnown RBP13.11□□□□□ -0.31
CLDN9-201ENST00000445369 RBMY1EA6NEQ0 496 aaKnown RBP13.11□□□□□ -0.31
CLDN9-201ENST00000445369 RBMY1DP0C7P1 496 aaKnown RBP13.11□□□□□ -0.31
CLDN9-201ENST00000445369 PMVKQ15126 192 aa13.11□□□□□ -0.31
CLDN9-201ENST00000445369 DUX3Q96PT4 197 aa13.11□□□□□ -0.31
CLDN9-201ENST00000445369 NAV2Q8IVL1 2488 aa13.1□□□□□ -0.31
CLDN9-201ENST00000445369 CREBBPQ92793 2442 aa13.1□□□□□ -0.31
CLDN9-201ENST00000445369 GAGE12BA1L429 117 aa13.1□□□□□ -0.31
CLDN9-201ENST00000445369 NSUN5P1Q3KNT7 163 aa13.1□□□□□ -0.31
CLDN9-201ENST00000445369 TMEM86BQ8N661 226 aa13.1□□□□□ -0.31
CLDN9-201ENST00000445369 PRADC1Q9BSG0 188 aa13.1□□□□□ -0.31
CLDN9-201ENST00000445369 CST9LQ9H4G1 147 aa13.1□□□□□ -0.31
CLDN9-201ENST00000445369 TRBV7-3A0A075B6L6 115 aa13.09□□□□□ -0.31
CLDN9-201ENST00000445369 C11orf86A6NJI1 115 aa13.09□□□□□ -0.31
CLDN9-201ENST00000445369 K7ERJ3 54 aa13.09□□□□□ -0.31
CLDN9-201ENST00000445369 RHOHQ15669 191 aa13.09□□□□□ -0.31
CLDN9-201ENST00000445369 RBX1P62877 108 aa13.09□□□□□ -0.31
CLDN9-201ENST00000445369 KHDC1LQ5JSQ8 128 aa13.09□□□□□ -0.31
CLDN9-201ENST00000445369 PAPPA-AS1Q5QFB9 102 aa13.09□□□□□ -0.31
CLDN9-201ENST00000445369 DLX4Q92988 240 aaPredicted RBP13.09□□□□□ -0.31
CLDN9-201ENST00000445369 NHP2Q9NX24 153 aaKnown RBP13.09□□□□□ -0.31
CLDN9-201ENST00000445369 KLHL30-AS1Q8NEE0 82 aa13.08□□□□□ -0.32
CLDN9-201ENST00000445369 PLA2G2AP14555 144 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms