RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 RBMY1A1P0DJD3 496 aaKnown RBP13.87□□□□□ -0.19
SEMA3D-202ENST00000444867 RBMY1CP0DJD4 496 aa13.87□□□□□ -0.19
SEMA3D-202ENST00000444867 RBMY1FQ15415 496 aaKnown RBP13.87□□□□□ -0.19
SEMA3D-202ENST00000444867 IFI27L1Q96BM0 104 aa13.87□□□□□ -0.19
SEMA3D-202ENST00000444867 NSD1Q96L73 2696 aaPredicted RBP13.87□□□□□ -0.19
SEMA3D-202ENST00000444867 MTORP42345 2549 aa13.87□□□□□ -0.19
SEMA3D-202ENST00000444867 OR11H12B2RN74 326 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 LGALS9BQ3B8N2 356 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 LGALS9CQ6DKI2 356 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 SAP30O75446 220 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 INSP01308 110 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 IGLC3P0DOY3 106 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 RPL32P62910 135 aaKnown RBP13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 NSUN5P1Q3KNT7 163 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 TMEM158Q8WZ71 300 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 FAM110AQ9BQ89 295 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 UQCR10Q9UDW1 63 aa13.86□□□□□ -0.19
SEMA3D-202ENST00000444867 IGLV1-51P01701 117 aa13.85□□□□□ -0.19
SEMA3D-202ENST00000444867 MRPL52Q86TS9 123 aaKnown RBP13.85□□□□□ -0.19
SEMA3D-202ENST00000444867 STHQ8IWL8 128 aa13.85□□□□□ -0.19
SEMA3D-202ENST00000444867 ST20Q9HBF5 79 aa13.85□□□□□ -0.19
SEMA3D-202ENST00000444867 HSBP1L1C9JCN9 74 aa13.84□□□□□ -0.19
SEMA3D-202ENST00000444867 H0Y8G0 127 aa13.84□□□□□ -0.19
SEMA3D-202ENST00000444867 ORMDL2Q53FV1 153 aa13.84□□□□□ -0.19
SEMA3D-202ENST00000444867 PTH2Q96A98 100 aa13.84□□□□□ -0.19
SEMA3D-202ENST00000444867 RPL39LQ96EH5 51 aaKnown RBP13.84□□□□□ -0.19
SEMA3D-202ENST00000444867 IGLL1P15814 213 aa13.83□□□□□ -0.2
SEMA3D-202ENST00000444867 ZNF415Q09FC8 603 aa13.83□□□□□ -0.2
SEMA3D-202ENST00000444867 MAJINQ3KP22 176 aa13.83□□□□□ -0.2
SEMA3D-202ENST00000444867 PIK3CD-AS1Q5SR53 167 aa13.83□□□□□ -0.2
SEMA3D-202ENST00000444867 SUMO4Q6EEV6 95 aa13.83□□□□□ -0.2
SEMA3D-202ENST00000444867 TRPT1Q86TN4 253 aaKnown RBP13.83□□□□□ -0.2
SEMA3D-202ENST00000444867 JPT2Q9H910 190 aa13.83□□□□□ -0.2
SEMA3D-202ENST00000444867 ATP5LO75964 103 aa13.82□□□□□ -0.2
SEMA3D-202ENST00000444867 LBHQ53QV2 105 aaPredicted RBP13.82□□□□□ -0.2
SEMA3D-202ENST00000444867 NIPBLQ6KC79 2804 aaeCLIP13.82□□□□□ -0.2
SEMA3D-202ENST00000444867 TCAPO15273 167 aa13.82□□□□□ -0.2
SEMA3D-202ENST00000444867 KRTAP10-3P60369 221 aa13.82□□□□□ -0.2
SEMA3D-202ENST00000444867 ZNF876PQ49A33 203 aa13.82□□□□□ -0.2
SEMA3D-202ENST00000444867 CUBNO60494 3623 aa13.82□□□□□ -0.2
SEMA3D-202ENST00000444867 A0A087WWL8 130 aa13.81□□□□□ -0.2
SEMA3D-202ENST00000444867 TRBV6-5A0A0K0K1A5 114 aa13.81□□□□□ -0.2
SEMA3D-202ENST00000444867 CRYGDP07320 174 aa13.81□□□□□ -0.2
SEMA3D-202ENST00000444867 NUTF2P61970 127 aaKnown RBP13.81□□□□□ -0.2
SEMA3D-202ENST00000444867 GOLT1BQ9Y3E0 138 aa13.81□□□□□ -0.2
SEMA3D-202ENST00000444867 NF1P21359 2839 aa13.8□□□□□ -0.2
SEMA3D-202ENST00000444867 F5H697 171 aa13.8□□□□□ -0.2
SEMA3D-202ENST00000444867 CRLF1O75462 422 aa13.8□□□□□ -0.2
SEMA3D-202ENST00000444867 NUDT3O95989 172 aa13.8□□□□□ -0.2
SEMA3D-202ENST00000444867 BEAN1Q3B7T3 259 aa13.8□□□□□ -0.2
SEMA3D-202ENST00000444867 LINC01587Q99440 93 aa13.8□□□□□ -0.2
SEMA3D-202ENST00000444867 WNK1Q9H4A3 2382 aa13.79□□□□□ -0.2
SEMA3D-202ENST00000444867 M0R2P5 195 aa13.79□□□□□ -0.2
SEMA3D-202ENST00000444867 SPXQ9BT56 116 aa13.79□□□□□ -0.2
SEMA3D-202ENST00000444867 MCRIP2Q9BUT9 160 aaKnown RBP13.79□□□□□ -0.2
SEMA3D-202ENST00000444867 G0S2P27469 103 aa13.79□□□□□ -0.2
SEMA3D-202ENST00000444867 C18orf15Q96N68 181 aa13.79□□□□□ -0.2
SEMA3D-202ENST00000444867 CSTL1Q9H114 145 aa13.79□□□□□ -0.2
SEMA3D-202ENST00000444867 hDV102S1A0JD36 115 aa13.78□□□□□ -0.2
SEMA3D-202ENST00000444867 LINC01549A6NIU2 74 aa13.78□□□□□ -0.2
SEMA3D-202ENST00000444867 M0R143 59 aa13.78□□□□□ -0.2
SEMA3D-202ENST00000444867 PF4P02776 101 aa13.78□□□□□ -0.2
SEMA3D-202ENST00000444867 POLR2KP53803 58 aaKnown RBP13.78□□□□□ -0.2
SEMA3D-202ENST00000444867 ZNF56Q15929 161 aa13.78□□□□□ -0.2
SEMA3D-202ENST00000444867 FAM74A4Q5TZK3 123 aa13.78□□□□□ -0.2
SEMA3D-202ENST00000444867 LURAP1LQ8IV03 231 aa13.78□□□□□ -0.2
SEMA3D-202ENST00000444867 PMCHL2Q9BQD1 86 aa13.78□□□□□ -0.2
SEMA3D-202ENST00000444867 A8MWV9 139 aa13.77□□□□□ -0.21
SEMA3D-202ENST00000444867 VCYO14598 125 aa13.77□□□□□ -0.21
SEMA3D-202ENST00000444867 HTN1P15515 57 aa13.77□□□□□ -0.21
SEMA3D-202ENST00000444867 Q6ZN92 141 aa13.77□□□□□ -0.21
SEMA3D-202ENST00000444867 LINC00482Q8N8I6 264 aa13.77□□□□□ -0.21
SEMA3D-202ENST00000444867 EDA2RQ9HAV5 297 aa13.77□□□□□ -0.21
SEMA3D-202ENST00000444867 M0QY20 66 aa13.76□□□□□ -0.21
SEMA3D-202ENST00000444867 HNRNPA3P51991 378 aaKnown RBP13.76□□□□□ -0.21
SEMA3D-202ENST00000444867 TOMM6Q96B49 74 aa13.76□□□□□ -0.21
SEMA3D-202ENST00000444867 FN1P02751 2386 aaKnown RBP13.76□□□□□ -0.21
SEMA3D-202ENST00000444867 PRSS1P07477 247 aa13.75□□□□□ -0.21
SEMA3D-202ENST00000444867 C11orf72Q8NBR9 251 aa13.75□□□□□ -0.21
SEMA3D-202ENST00000444867 C2orf88Q9BSF0 95 aa13.75□□□□□ -0.21
SEMA3D-202ENST00000444867 XCL2Q9UBD3 114 aa13.75□□□□□ -0.21
SEMA3D-202ENST00000444867 H7C1H1 209 aa13.75□□□□□ -0.21
SEMA3D-202ENST00000444867 C19orf73Q9NVV2 129 aa13.75□□□□□ -0.21
SEMA3D-202ENST00000444867 SETD2Q9BYW2 2564 aaPredicted RBP13.74□□□□□ -0.21
SEMA3D-202ENST00000444867 TRBV27A0A0K0K1C4 114 aa13.74□□□□□ -0.21
SEMA3D-202ENST00000444867 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.74□□□□□ -0.21
SEMA3D-202ENST00000444867 ODF1Q14990 250 aa13.74□□□□□ -0.21
SEMA3D-202ENST00000444867 KIR2DL4Q99706 377 aa13.74□□□□□ -0.21
SEMA3D-202ENST00000444867 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
SEMA3D-202ENST00000444867 SNHG12Q9BXW3 62 aa13.74□□□□□ -0.21
SEMA3D-202ENST00000444867 MRPS16Q9Y3D3 137 aaKnown RBP13.74□□□□□ -0.21
SEMA3D-202ENST00000444867 SDHAF1A6NFY7 115 aa13.73□□□□□ -0.21
SEMA3D-202ENST00000444867 C1orf158Q8N1D5 194 aa13.73□□□□□ -0.21
SEMA3D-202ENST00000444867 ZMAT4Q9H898 229 aa13.73□□□□□ -0.21
SEMA3D-202ENST00000444867 EREGO14944 169 aa13.72□□□□□ -0.21
SEMA3D-202ENST00000444867 TRAV12-1A0A0B4J245 112 aa13.72□□□□□ -0.21
SEMA3D-202ENST00000444867 RHODO00212 210 aa13.72□□□□□ -0.21
SEMA3D-202ENST00000444867 INSL3P51460 131 aa13.72□□□□□ -0.21
SEMA3D-202ENST00000444867 UFSP1Q6NVU6 142 aa13.72□□□□□ -0.21
SEMA3D-202ENST00000444867 MORN3Q6PF18 240 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms