RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 PRB1P04280 392 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 MP68P56378 58 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 Q9HAA7 133 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 F8WEM9 126 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 ZNF22P17026 224 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-202ENST00000444237 SMCPP49901 116 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-202ENST00000444237 NSUN5P1Q3KNT7 163 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 RNF185Q96GF1 192 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 C9orf85Q96MD7 179 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 A0A0J9YX75 114 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 FAM223BA6NKX1 122 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 TEX22C9J3V5 150 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 GATA4P43694 442 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 UBE2BP63146 152 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 EIF4EBP1Q13541 118 aaPredicted RBP3.95□□□□□ -1.78
SCN11A-202ENST00000444237 FAM222AQ5U5X8 452 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 FAM223AQ8IWN6 122 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 C7orf69Q9H7B7 122 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 TPSG1Q9NRR2 321 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 DKK1O94907 266 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 INSP01308 110 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 IGKV1-17P01599 117 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 C5orf38Q86SI9 138 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 FAM110DQ8TAY7 271 aaPredicted RBP3.95□□□□□ -1.78
SCN11A-202ENST00000444237 OPRPNQ99935 248 aaPredicted RBP3.95□□□□□ -1.78
SCN11A-202ENST00000444237 TRGV2A0A075B6R0 118 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 IGKV1D-37A0A075B6S9 117 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 CRIP2P52943 208 aaPredicted RBP3.95□□□□□ -1.78
SCN11A-202ENST00000444237 SBSPONQ8IVN8 264 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 SIRPDQ9H106 197 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 ZNRD1Q9P1U0 126 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 I3L2K1 104 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 SPRY2O43597 315 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 PROP1O75360 226 aa3.95□□□□□ -1.78
SCN11A-202ENST00000444237 FAM186AA6NE01 2351 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 A0A0G2JNJ9 132 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 PINLYPA6NC86 204 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 XCL1P47992 114 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 BRWD1-AS2P59051 145 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 SS18Q15532 418 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 MINOS1Q5TGZ0 78 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 C17orf82Q86X59 251 aaPredicted RBP3.94□□□□□ -1.78
SCN11A-202ENST00000444237 XCL2Q9UBD3 114 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 Q9UFV3 132 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 MINOS1-NBL1R4GNA1 71 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 TMEM178BH3BS89 294 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 C20orf203Q8NBC4 194 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 SNURFQ9Y675 71 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 A0A096LNJ9 63 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 RNASE13Q5GAN3 156 aaKnown RBP3.94□□□□□ -1.78
SCN11A-202ENST00000444237 GOLGB1Q14789 3259 aaKnown RBP3.94□□□□□ -1.78
SCN11A-202ENST00000444237 NHLRC4P0CG21 123 aaPredicted RBP3.94□□□□□ -1.78
SCN11A-202ENST00000444237 UBE2AP49459 152 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 PIK3CD-AS1Q5SR53 167 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 MYO7BQ6PIF6 2116 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 C9orf47Q6ZRZ4 202 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 PIP4P1Q86T03 277 aa3.94□□□□□ -1.78
SCN11A-202ENST00000444237 IGHV3-11P01762 117 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 MIFP14174 115 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 LOXP28300 417 aaPredicted RBP3.93□□□□□ -1.78
SCN11A-202ENST00000444237 NREPQ16612 68 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 C9orf106Q8NAJ2 232 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 GNLYP22749 145 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 Q6ZS46 218 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 COX7B2Q8TF08 81 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 USMG5Q96IX5 58 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 KIAA1549Q9HCM3 1950 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 TRGV4A0A0C4DH28 118 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 LY6G6EA0A0G2JKS1 128 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 RHPN1-AS1Q9BWJ2 59 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 U3KQA8 63 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 INTS1Q8N201 2190 aaKnown RBP3.93□□□□□ -1.78
SCN11A-202ENST00000444237 EML6Q6ZMW3 1958 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 ZNF503-AS2A6NEH8 195 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 GNRH2O43555 120 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 SPRNQ5BIV9 151 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 C11orf53Q8IXP5 236 aa3.93□□□□□ -1.78
SCN11A-202ENST00000444237 TNRC6BQ9UPQ9 1833 aaKnown RBP3.93□□□□□ -1.78
SCN11A-202ENST00000444237 TPRP12270 2363 aaKnown RBP3.93□□□□□ -1.78
SCN11A-202ENST00000444237 NOTCH4Q99466 2003 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 K7EIM0 57 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 IGLV2-11P01706 119 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 LINC00308Q8TCZ7 52 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 ITLN2Q8WWU7 325 aaPredicted RBP3.92□□□□□ -1.78
SCN11A-202ENST00000444237 NUP210LQ5VU65 1888 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 CRIP1P50238 77 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 DYSFO75923 2080 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 COL8A2P25067 703 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 ZNF80P51504 273 aaPredicted RBP3.92□□□□□ -1.78
SCN11A-202ENST00000444237 NRACQ8N912 160 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 PRB2P02812 416 aaPredicted RBP3.92□□□□□ -1.78
SCN11A-202ENST00000444237 WT1P19544 449 aaPredicted RBP3.92□□□□□ -1.78
SCN11A-202ENST00000444237 CNFNQ9BYD5 112 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 SPRR3Q9UBC9 169 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 BSPH1Q075Z2 132 aa3.92□□□□□ -1.78
SCN11A-202ENST00000444237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.91□□□□□ -1.78
SCN11A-202ENST00000444237 IGKV2-29A2NJV5 120 aaPredicted RBP3.91□□□□□ -1.78
SCN11A-202ENST00000444237 NDUFA1O15239 70 aa3.91□□□□□ -1.78
SCN11A-202ENST00000444237 PI4KAP42356 2102 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms