RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 C1QBP02746 253 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 ATP6V0CP27449 155 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 ZNF80P51504 273 aaPredicted RBP5.18□□□□□ -1.58
VPS50-204ENST00000438395 IFITM3Q01628 133 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 DPPA3Q6W0C5 159 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 ZFP2Q6ZN57 461 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 OR2T35Q8NGX2 323 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 MED28Q9H204 178 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 PARLQ9H300 379 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 C11orf21Q9P2W6 132 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 FAT1Q14517 4588 aa5.18□□□□□ -1.58
VPS50-204ENST00000438395 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.17□□□□□ -1.58
VPS50-204ENST00000438395 A0A087WX48 190 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 PGPEP1LA6NFU8 196 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 FABP5P3A8MUU1 101 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 B4DEV8 164 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 PIK3CD-AS1Q5SR53 167 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 FAM74A4Q5TZK3 123 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 OR11H4Q8NGC9 324 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 AQP10Q96PS8 301 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 TNFSF18Q9UNG2 199 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 ALG5Q9Y673 324 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 ARL2-SNX15V9GYD0 113 aa5.17□□□□□ -1.58
VPS50-204ENST00000438395 IGKV2D-24A0A075B6R9 120 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 FXYD6-FXYD2A0A087WZ82 144 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 TRAV34A0A0B4J273 112 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 A0A1W2PRE2 83 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 RBFOX3A6NFN3 312 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 H3BVH4 76 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 M0R036 132 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 PEX7O00628 323 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 RNASE3P12724 160 aaKnown RBP5.16□□□□□ -1.58
VPS50-204ENST00000438395 TPT1P13693 172 aaKnown RBP5.16□□□□□ -1.58
VPS50-204ENST00000438395 UBE2G2P60604 165 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 UBE2G1P62253 170 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 ELOBQ15370 118 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 AKR1C8PQ5T2L2 129 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 FAM162BQ5T6X4 162 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 DAZ4Q86SG3 579 aaKnown RBP5.16□□□□□ -1.58
VPS50-204ENST00000438395 Q86TA4 180 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.16□□□□□ -1.58
VPS50-204ENST00000438395 NKX6-2Q9C056 277 aaPredicted RBP5.16□□□□□ -1.58
VPS50-204ENST00000438395 DAZ3Q9NR90 486 aaKnown RBP5.16□□□□□ -1.58
VPS50-204ENST00000438395 IL36BQ9NZH7 164 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 PHLDA3Q9Y5J5 127 aa5.16□□□□□ -1.58
VPS50-204ENST00000438395 CTXND1A0A1B0GTU2 59 aa5.15□□□□□ -1.59
VPS50-204ENST00000438395 M0R381 172 aa5.15□□□□□ -1.59
VPS50-204ENST00000438395 IGLV2-11P01706 119 aa5.15□□□□□ -1.59
VPS50-204ENST00000438395 Q8N976 141 aa5.15□□□□□ -1.59
VPS50-204ENST00000438395 STOML3Q8TAV4 291 aa5.15□□□□□ -1.59
VPS50-204ENST00000438395 SUN5Q8TC36 379 aa5.15□□□□□ -1.59
VPS50-204ENST00000438395 BAALCQ8WXS3 180 aa5.15□□□□□ -1.59
VPS50-204ENST00000438395 HIST1H2BAQ96A08 127 aa5.15□□□□□ -1.59
VPS50-204ENST00000438395 UBE2WQ96B02 151 aa5.15□□□□□ -1.59
VPS50-204ENST00000438395 A0A087WWL8 130 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 IGKV3D-20A0A0C4DH25 116 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 GRIFINA4D1Z8 144 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 SH2D1AO60880 128 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 PTTG1O95997 202 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 CRPP02741 224 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 GIPP09681 153 aaPredicted RBP5.14□□□□□ -1.59
VPS50-204ENST00000438395 ARMS2P0C7Q2 107 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 RPL36AP83881 106 aaKnown RBP5.14□□□□□ -1.59
VPS50-204ENST00000438395 WFDC2Q14508 124 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 C14orf177Q52M58 125 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 CST9LP1Q5W188 147 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 ZFP82Q8N141 532 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 C14orf178Q8N769 122 aaPredicted RBP5.14□□□□□ -1.59
VPS50-204ENST00000438395 DEFB104AQ8WTQ1 72 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 RPL36ALQ969Q0 106 aaKnown RBP5.14□□□□□ -1.59
VPS50-204ENST00000438395 FMC1Q96HJ9 113 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 LINC00479Q96M42 142 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 FAM30AQ9NZY2 134 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 KLK12Q9UKR0 248 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 ZFP30Q9Y2G7 519 aa5.14□□□□□ -1.59
VPS50-204ENST00000438395 TMSB15BA0A087X1C1 80 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 TRBV10-1A0A0K0K1A3 114 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 MAP1LC3B2A6NCE7 125 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 TMEM262E9PQX1 116 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 LINC00694P0DN24 101 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 AKR1C3P42330 323 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 PKIAP61925 76 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 Q0VG73 95 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 RPL7L1Q6DKI1 246 aaKnown RBP5.13□□□□□ -1.59
VPS50-204ENST00000438395 NIT1Q86X76 327 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 ZC2HC1AQ96GY0 325 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 TCEAL7Q9BRU2 100 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 CHCHD7Q9BUK0 85 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 C1orf43Q9BWL3 253 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 SAMD10Q9BYL1 202 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 MAP1LC3BQ9GZQ8 125 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 JPT2Q9H910 190 aa5.13□□□□□ -1.59
VPS50-204ENST00000438395 FAM74A7A6NL05 159 aa5.12□□□□□ -1.59
VPS50-204ENST00000438395 KRBOX1C9JBD0 128 aa5.12□□□□□ -1.59
VPS50-204ENST00000438395 ZNF56Q15929 161 aa5.12□□□□□ -1.59
VPS50-204ENST00000438395 LINC01620Q4KN68 170 aa5.12□□□□□ -1.59
VPS50-204ENST00000438395 Q6ZSA8 131 aa5.12□□□□□ -1.59
VPS50-204ENST00000438395 TRBV7-3A0A075B6L6 115 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 PFDN1O60925 122 aa5.11□□□□□ -1.59
VPS50-204ENST00000438395 ZNF726P1Q15940 193 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms