RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 IGKV3-7A0A075B6H7 116 aa8.47□□□□□ -1.05
USP4-205ENST00000431357 MSMBP08118 114 aa8.47□□□□□ -1.05
USP4-205ENST00000431357 LGALS1P09382 135 aaKnown RBP8.47□□□□□ -1.05
USP4-205ENST00000431357 POLR2KP53803 58 aaKnown RBP8.47□□□□□ -1.05
USP4-205ENST00000431357 HERVK_113P61574 105 aa8.47□□□□□ -1.05
USP4-205ENST00000431357 ZFAND6Q6FIF0 208 aa8.47□□□□□ -1.05
USP4-205ENST00000431357 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
USP4-205ENST00000431357 SELENOKQ9Y6D0 94 aa8.47□□□□□ -1.05
USP4-205ENST00000431357 Q6ZUT4 128 aa8.47□□□□□ -1.05
USP4-205ENST00000431357 DCANP1Q8TF63 244 aa8.47□□□□□ -1.05
USP4-205ENST00000431357 KIR2DL4Q99706 377 aa8.47□□□□□ -1.05
USP4-205ENST00000431357 TMEM89A2RUT3 159 aa8.46□□□□□ -1.06
USP4-205ENST00000431357 HOXA3O43365 443 aaPredicted RBP8.46□□□□□ -1.06
USP4-205ENST00000431357 ZFP2Q6ZN57 461 aa8.46□□□□□ -1.06
USP4-205ENST00000431357 TEX29Q8N6K0 151 aa8.46□□□□□ -1.06
USP4-205ENST00000431357 TIMM17AQ99595 171 aa8.46□□□□□ -1.06
USP4-205ENST00000431357 CDIP1Q9H305 208 aa8.46□□□□□ -1.06
USP4-205ENST00000431357 NBASA2RRP1 2371 aa8.46□□□□□ -1.06
USP4-205ENST00000431357 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 WFDC2Q14508 124 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 PMVKQ15126 192 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 SUMO4Q6EEV6 95 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 PTH2Q96A98 100 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 TP53TG1Q9Y2A0 90 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 IGIPA6NJ69 53 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 LGALS9O00182 355 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 DUSP14O95147 198 aaKnown RBP8.45□□□□□ -1.06
USP4-205ENST00000431357 CRYGDP07320 174 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 CD7P09564 240 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 COX6B1P14854 86 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 ATP5J2P56134 94 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 FOXI1Q12951 378 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 GAGE13Q4V321 117 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 Q6ZS46 218 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 SYT8Q8NBV8 401 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 TMEM126AQ9H061 195 aa8.45□□□□□ -1.06
USP4-205ENST00000431357 IGF2RP11717 2491 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 CACNA1BQ00975 2339 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 IGHV4-30-2A0A087WSY4 118 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 TRAV25A0A0B4J276 109 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 B4DSR2 109 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 ETDBQ3ZM63 59 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 HIVEP3Q5T1R4 2406 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 SPTBN1Q01082 2364 aaKnown RBP8.44□□□□□ -1.06
USP4-205ENST00000431357 COL6A6A6NMZ7 2263 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 TRBV27A0A0K0K1C4 114 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 TMEM262E9PQX1 116 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 SRD5A1P18405 259 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 C9orf85Q96MD7 179 aa8.44□□□□□ -1.06
USP4-205ENST00000431357 IGLV4-69A0A075B6H9 119 aa8.43□□□□□ -1.06
USP4-205ENST00000431357 TRAV12-3A0A0B4J271 114 aa8.43□□□□□ -1.06
USP4-205ENST00000431357 F5H697 171 aa8.43□□□□□ -1.06
USP4-205ENST00000431357 TSHBP01222 138 aa8.43□□□□□ -1.06
USP4-205ENST00000431357 PSMB8P28062 276 aa8.43□□□□□ -1.06
USP4-205ENST00000431357 DSCR9P59020 149 aa8.43□□□□□ -1.06
USP4-205ENST00000431357 SNRPD3P62318 126 aaKnown RBP8.43□□□□□ -1.06
USP4-205ENST00000431357 VPREB3Q9UKI3 123 aa8.43□□□□□ -1.06
USP4-205ENST00000431357 ATRXP46100 2492 aa8.43□□□□□ -1.06
USP4-205ENST00000431357 IGHV3-16A0A0C4DH30 117 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 SDHAF1A6NFY7 115 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 C11orf86A6NJI1 115 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 H3BMG7 143 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 APOMO95445 188 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP4-205ENST00000431357 ABCA2Q9BZC7 2435 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 A0A0J9YX75 114 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 RHOHQ15669 191 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 Q6Q795 121 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 JPT2Q9H910 190 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 PRO0461Q9UI25 63 aa8.42□□□□□ -1.06
USP4-205ENST00000431357 A0A087WWL8 130 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 UBE2D1P51668 147 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 MORN3Q6PF18 240 aaPredicted RBP8.41□□□□□ -1.06
USP4-205ENST00000431357 NRGNQ92686 78 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 CSMD1Q96PZ7 3565 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 RELNP78509 3460 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 K7EQG2 157 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 RHODO00212 210 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 EDN2P20800 178 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 ZNF876PQ49A33 203 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 LYRM7Q5U5X0 104 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
USP4-205ENST00000431357 PLEKHB2Q96CS7 222 aa8.41□□□□□ -1.06
USP4-205ENST00000431357 IGHV1OR15-1A0A075B7D0 117 aa8.4□□□□□ -1.06
USP4-205ENST00000431357 ZNF688P0C7X2 276 aa8.4□□□□□ -1.06
USP4-205ENST00000431357 NSUN5P1Q3KNT7 163 aa8.4□□□□□ -1.06
USP4-205ENST00000431357 SH2D6Q7Z4S9 175 aa8.4□□□□□ -1.06
USP4-205ENST00000431357 RNF152Q8N8N0 203 aa8.4□□□□□ -1.06
USP4-205ENST00000431357 SPANXCQ9NY87 97 aa8.4□□□□□ -1.06
USP4-205ENST00000431357 MUC4Q99102 2169 aa8.4□□□□□ -1.06
USP4-205ENST00000431357 A0A0J9YY99 117 aa8.39□□□□□ -1.07
USP4-205ENST00000431357 AVPP01185 164 aa8.39□□□□□ -1.07
USP4-205ENST00000431357 NHLRC4P0CG21 123 aaPredicted RBP8.39□□□□□ -1.07
USP4-205ENST00000431357 XGP55808 180 aa8.39□□□□□ -1.07
USP4-205ENST00000431357 AGRNO00468 2067 aa8.39□□□□□ -1.07
USP4-205ENST00000431357 M0QY20 66 aa8.39□□□□□ -1.07
USP4-205ENST00000431357 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms