RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 NAA60Q9H7X0 242 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 IDI2-AS1Q9NZ38 188 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 LSM5Q9Y4Y9 91 aaKnown RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 INSIG2Q9Y5U4 225 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 MPC1Q9Y5U8 109 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 F11RQ9Y624 299 aaKnown RBP2.81□□□□□ -1.96
HMGB3-203ENST00000430118 HLA-DRB4X5D2U9 266 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 PLCE1Q9P212 2302 aa2.81□□□□□ -1.96
HMGB3-203ENST00000430118 ARFGEF3Q5TH69 2177 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 TET2Q6N021 2002 aaPredicted RBP2.8□□□□□ -1.96
HMGB3-203ENST00000430118 IGHV3OR16-9A0A0B4J2B5 98 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 C9JCJ5 164 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 SNCGO76070 127 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 NAPSAO96009 420 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 SMIM13P0DJ93 91 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 IGFBP3P17936 291 aaPredicted RBP2.8□□□□□ -1.96
HMGB3-203ENST00000430118 NTF3P20783 257 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 CNTFRP26992 372 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 MPV17P39210 176 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 FXYD6P3P58550 94 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 DAZ2Q13117 558 aaKnown RBP2.8□□□□□ -1.96
HMGB3-203ENST00000430118 WFDC2Q14508 124 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 TAL2Q16559 108 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 CEACAM16Q2WEN9 425 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 DEFB112Q30KQ8 113 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 ETDBQ3ZM63 59 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 TMEM155Q4W5P6 130 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 LINC01545Q5VT33 79 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 EBLN2Q6P2I7 272 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 LYPD2Q6UXB3 125 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 LYPD6Q86Y78 171 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 SBSPONQ8IVN8 264 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 OR4C13Q8NGP0 309 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 OTOSQ8NHW6 89 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 RAB37Q96AX2 223 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 SLC25A44Q96H78 314 aaPredicted RBP2.8□□□□□ -1.96
HMGB3-203ENST00000430118 LINC01600Q96MT4 127 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 PRELID3AQ96N28 172 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 FAM103A1Q9BTL3 118 aaKnown RBP2.8□□□□□ -1.96
HMGB3-203ENST00000430118 IMUPQ9GZP8 106 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 C16orf95Q9H693 158 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 DAZ3Q9NR90 486 aaKnown RBP2.8□□□□□ -1.96
HMGB3-203ENST00000430118 SLC39A9Q9NUM3 307 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 CKLFQ9UBR5 152 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 CADP27708 2225 aa2.8□□□□□ -1.96
HMGB3-203ENST00000430118 ALPK2Q86TB3 2170 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 A0A0B4J2E0 115 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 IGHV1-24A0A0C4DH33 117 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 TRBV7-7A0A0K0K1E9 115 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 CTXND1A0A1B0GTU2 59 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 A0A1B0GX12 115 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 M0R2P5 195 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 HMGN4O00479 90 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 SDCBPO00560 298 aaPredicted RBP2.79□□□□□ -1.96
HMGB3-203ENST00000430118 UQCRQO14949 82 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 INSP01308 110 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF688P0C7X2 276 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 LINC00694P0DN24 101 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 CBLN1P23435 193 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 OPRK1P41145 380 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 NMUP48645 174 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 TAS2R45P59539 299 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 TMEM258P61165 79 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF90Q03938 601 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 Q56UQ5 140 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 IBA57Q5T440 356 aaKnown RBP2.79□□□□□ -1.96
HMGB3-203ENST00000430118 CFAP126Q5VTH2 177 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
HMGB3-203ENST00000430118 BRD3OSQ6XYD6 125 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 LINC00173Q6ZV60 143 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 TCF23Q7RTU1 214 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 MRPL55Q7Z7F7 128 aaKnown RBP2.79□□□□□ -1.96
HMGB3-203ENST00000430118 MDP1Q86V88 176 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 TEN1Q86WV5 123 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 NDUFA11Q86Y39 141 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 GAPTQ8N292 157 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 OR1L8Q8NGR8 309 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 BAALCQ8WXS3 180 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 ZNF286AQ9HBT8 521 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 KCNIP2Q9NS61 270 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 PRNDQ9UKY0 176 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 KLF12Q9Y4X4 402 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 TMEM14AQ9Y6G1 99 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 ARL2-SNX15V9GYD0 113 aa2.79□□□□□ -1.96
HMGB3-203ENST00000430118 HERC2O95714 4834 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 DNAH7Q8WXX0 4024 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 IGLV3-9A0A075B6K5 115 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 IGLV1-36A0A0B4J1U3 117 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 IGHV3-74A0A0B4J1X5 117 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 TRAV5A0A0B4J249 113 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 IGKV3D-20A0A0C4DH25 116 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 A0A1B0GV50 99 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 FAM240AA0A1B0GVK7 77 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 LOC107986453A0A1B0GWG9 222 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 PLAC8L1A1L4L8 177 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 TMEM14DPA8MWL7 114 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 F2Z2F3 143 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 LINC01619G3V211 115 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 K7EIL1 84 aa2.78□□□□□ -1.96
HMGB3-203ENST00000430118 ENSAO43768 121 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms